RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W VPS53P47061 822 aa7.43□□□□□ -1.22
NUP84YDL116W CTR1P49573 406 aa7.43□□□□□ -1.22
NUP84YDL116W YGL039WP53183 348 aaKnown RBP7.43□□□□□ -1.22
NUP84YDL116W NCS2P53923 493 aaPredicted RBP7.43□□□□□ -1.22
NUP84YDL116W SUB1P54000 292 aaKnown RBP7.43□□□□□ -1.22
NUP84YDL116W MAG2Q06436 670 aaKnown RBP7.43□□□□□ -1.22
NUP84YDL116W IRC3Q06683 689 aa7.43□□□□□ -1.22
NUP84YDL116W MDM38Q08179 573 aa7.43□□□□□ -1.22
NUP84YDL116W WRS1Q12109 432 aaKnown RBP7.43□□□□□ -1.22
NUP84YDL116W GCD2P12754 651 aaPredicted RBP7.43□□□□□ -1.22
NUP84YDL116W RET1P22276 1149 aaKnown RBP7.43□□□□□ -1.22
NUP84YDL116W ESS1P22696 170 aa7.43□□□□□ -1.22
NUP84YDL116W SWI3P32591 825 aa7.43□□□□□ -1.22
NUP84YDL116W TRZ1P36159 838 aaPredicted RBP7.43□□□□□ -1.22
NUP84YDL116W UBP13P38187 747 aa7.43□□□□□ -1.22
NUP84YDL116W PES4P39684 611 aa7.43□□□□□ -1.22
NUP84YDL116W OAF1P39720 1047 aaPredicted RBP7.43□□□□□ -1.22
NUP84YDL116W EMW1P42842 904 aaKnown RBP7.43□□□□□ -1.22
NUP84YDL116W YJR039WP47107 1121 aa7.43□□□□□ -1.22
NUP84YDL116W NNF2P53253 936 aa7.43□□□□□ -1.22
NUP84YDL116W FPK1P53739 893 aa7.43□□□□□ -1.22
NUP84YDL116W BUG1Q12191 341 aa7.43□□□□□ -1.22
NUP84YDL116W RPL24AP04449 155 aaKnown RBP7.42□□□□□ -1.22
NUP84YDL116W CMD1P06787 147 aaKnown RBP7.42□□□□□ -1.22
NUP84YDL116W RAD3P06839 778 aa7.42□□□□□ -1.22
NUP84YDL116W RGR1P19263 1082 aa7.42□□□□□ -1.22
NUP84YDL116W PLC1P32383 869 aa7.42□□□□□ -1.22
NUP84YDL116W PGM2P37012 569 aaKnown RBP7.42□□□□□ -1.22
NUP84YDL116W VHC1P38329 1120 aa7.42□□□□□ -1.22
NUP84YDL116W TOM71P38825 639 aaKnown RBP7.42□□□□□ -1.22
NUP84YDL116W RIM21P48565 533 aa7.42□□□□□ -1.22
NUP84YDL116W YGR021WP53212 290 aa7.42□□□□□ -1.22
NUP84YDL116W MSC6Q08818 692 aaKnown RBP7.42□□□□□ -1.22
NUP84YDL116W SLP1Q12232 587 aa7.42□□□□□ -1.22
NUP84YDL116W FLO11P08640 1367 aa7.42□□□□□ -1.22
NUP84YDL116W KTR2P33550 425 aa7.42□□□□□ -1.22
NUP84YDL116W MSG5P38590 489 aa7.42□□□□□ -1.22
NUP84YDL116W RCK2P38623 610 aa7.42□□□□□ -1.22
NUP84YDL116W INA22P40576 216 aa7.42□□□□□ -1.22
NUP84YDL116W APL6P46682 809 aa7.42□□□□□ -1.22
NUP84YDL116W NNF1P47149 201 aa7.42□□□□□ -1.22
NUP84YDL116W ATH1P48016 1211 aa7.42□□□□□ -1.22
NUP84YDL116W YAF9P53930 226 aa7.42□□□□□ -1.22
NUP84YDL116W YKU80Q04437 629 aa7.42□□□□□ -1.22
NUP84YDL116W UTP4Q06679 776 aaKnown RBP7.42□□□□□ -1.22
NUP84YDL116W PWP1P21304 576 aaKnown RBP7.41□□□□□ -1.22
NUP84YDL116W CLB4P24871 460 aa7.41□□□□□ -1.22
NUP84YDL116W CDC10P25342 322 aaKnown RBP7.41□□□□□ -1.22
NUP84YDL116W BUD14P27637 709 aa7.41□□□□□ -1.22
NUP84YDL116W GYP6P32806 458 aa7.41□□□□□ -1.22
NUP84YDL116W RAD5P32849 1169 aaPredicted RBP7.41□□□□□ -1.22
NUP84YDL116W NPL4P33755 580 aa7.41□□□□□ -1.22
NUP84YDL116W RRN3P36070 627 aa7.41□□□□□ -1.22
NUP84YDL116W RIO2P40160 425 aaKnown RBP7.41□□□□□ -1.22
NUP84YDL116W AXL1P40851 1208 aa7.41□□□□□ -1.22
NUP84YDL116W YLR297WQ05899 129 aa7.41□□□□□ -1.22
NUP84YDL116W VIP1Q06685 1146 aaKnown RBP7.41□□□□□ -1.22
NUP84YDL116W TCO89Q08921 799 aa7.41□□□□□ -1.22
NUP84YDL116W CLF1Q12309 687 aaPredicted RBP7.41□□□□□ -1.22
NUP84YDL116W MMP1Q12372 583 aa7.41□□□□□ -1.22
NUP84YDL116W RPL8AP17076 256 aaKnown RBP7.4□□□□□ -1.22
NUP84YDL116W VPS45P38932 577 aa7.4□□□□□ -1.22
NUP84YDL116W SGM1P47166 707 aa7.4□□□□□ -1.22
NUP84YDL116W MSN5P52918 1224 aa7.4□□□□□ -1.22
NUP84YDL116W MFM1Q02783 413 aa7.4□□□□□ -1.22
NUP84YDL116W YMR187CQ03236 431 aa7.4□□□□□ -1.22
NUP84YDL116W SND1Q04007 877 aa7.4□□□□□ -1.22
NUP84YDL116W RKM4Q12504 494 aa7.4□□□□□ -1.22
NUP84YDL116W HKR1P41809 1802 aa7.4□□□□□ -1.22
NUP84YDL116W ARD1P07347 238 aaPredicted RBP7.4□□□□□ -1.23
NUP84YDL116W CHS2P14180 963 aa7.4□□□□□ -1.23
NUP84YDL116W YJU3P28321 313 aa7.4□□□□□ -1.23
NUP84YDL116W SMY1P32364 656 aaKnown RBP7.4□□□□□ -1.23
NUP84YDL116W TAF1P46677 1066 aa7.4□□□□□ -1.23
NUP84YDL116W ALY2P47029 1046 aa7.4□□□□□ -1.23
NUP84YDL116W YMR018WQ04364 514 aa7.4□□□□□ -1.23
NUP84YDL116W SPC24Q04477 213 aa7.4□□□□□ -1.23
NUP84YDL116W SRM1P21827 482 aa7.39□□□□□ -1.23
NUP84YDL116W CAP1P28495 268 aaKnown RBP7.39□□□□□ -1.23
NUP84YDL116W GUT1P32190 709 aa7.39□□□□□ -1.23
NUP84YDL116W SQT1P35184 431 aa7.39□□□□□ -1.23
NUP84YDL116W RNR4P49723 345 aaKnown RBP7.39□□□□□ -1.23
NUP84YDL116W ARK1P53974 638 aa7.39□□□□□ -1.23
NUP84YDL116W VPS16Q03308 798 aa7.39□□□□□ -1.23
NUP84YDL116W DON1Q05610 365 aa7.39□□□□□ -1.23
NUP84YDL116W YDL124WQ07551 312 aaKnown RBP7.39□□□□□ -1.23
NUP84YDL116W THS1P04801 734 aaKnown RBP7.39□□□□□ -1.23
NUP84YDL116W PRE8P23639 250 aa7.39□□□□□ -1.23
NUP84YDL116W MGT1P26188 188 aa7.39□□□□□ -1.23
NUP84YDL116W MRF1P30775 413 aaPredicted RBP7.39□□□□□ -1.23
NUP84YDL116W BUD2P33314 1104 aa7.39□□□□□ -1.23
NUP84YDL116W END3P39013 349 aa7.39□□□□□ -1.23
NUP84YDL116W CLA4P48562 842 aa7.39□□□□□ -1.23
NUP84YDL116W LGE1Q02796 332 aaKnown RBP7.39□□□□□ -1.23
NUP84YDL116W BUL2Q03758 920 aaKnown RBP7.39□□□□□ -1.23
NUP84YDL116W SHE9Q04172 456 aa7.39□□□□□ -1.23
NUP84YDL116W TMA64Q04600 565 aaKnown RBP7.39□□□□□ -1.23
NUP84YDL116W DUS4Q06063 367 aa7.39□□□□□ -1.23
NUP84YDL116W YPR097WQ06839 1073 aa7.39□□□□□ -1.23
NUP84YDL116W YPL277CQ08989 487 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 66 ms