RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	YHR131C	P38835	850 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	YHR202W	P38887	602 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	AIP1	P46680	615 aa	Known RBP	6.31	□□□□□ -1.4
ATG12	YBR217W	EBS1	Q03466	884 aa	Known RBP	6.31	□□□□□ -1.4
ATG12	YBR217W	CEF1	Q03654	590 aa	Predicted RBP	6.31	□□□□□ -1.4
ATG12	YBR217W	SNU56	Q03782	492 aa	Known RBP	6.31	□□□□□ -1.4
ATG12	YBR217W	DON1	Q05610	365 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	CDD1	Q06549	142 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	DNL4	Q08387	944 aa	Predicted RBP	6.31	□□□□□ -1.4
ATG12	YBR217W	SLX4	Q12098	748 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	REC8	Q12188	680 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	PUS1	Q12211	544 aa	Known RBP	6.31	□□□□□ -1.4
ATG12	YBR217W	YMR084W	A2P2R3	262 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	CDC37	P06101	506 aa	Known RBP	6.3	□□□□□ -1.4
ATG12	YBR217W	MAK16	P10962	306 aa	Predicted RBP	6.3	□□□□□ -1.4
ATG12	YBR217W	SSB1	P11484	613 aa	Known RBP	6.3	□□□□□ -1.4
ATG12	YBR217W	IME1	P21190	360 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	MRC1	P25588	1096 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	OXP1	P28273	1286 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	BCH2	P36122	765 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	ADE17	P38009	592 aa	Known RBP	6.3	□□□□□ -1.4
ATG12	YBR217W	PTC4	P38089	393 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	SSB2	P40150	613 aa	Known RBP	6.3	□□□□□ -1.4
ATG12	YBR217W	YNL034W	P53963	612 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	YNL018C	P53976	612 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	TBF1	Q02457	562 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	GIR2	Q03768	265 aa	Predicted RBP	6.3	□□□□□ -1.4
ATG12	YBR217W	SPO71	Q03868	1245 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	RLP24	Q07915	199 aa	Known RBP	6.3	□□□□□ -1.4
ATG12	YBR217W	FAL1	Q12099	399 aa	Known RBP	6.3	□□□□□ -1.4
ATG12	YBR217W	CTF3	Q12748	733 aa		6.3	□□□□□ -1.4
ATG12	YBR217W	RPC25	P35718	212 aa		6.29	□□□□□ -1.4
ATG12	YBR217W	PSY4	P38193	441 aa		6.29	□□□□□ -1.4
ATG12	YBR217W	YIR016W	P40572	265 aa		6.29	□□□□□ -1.4
ATG12	YBR217W	DAS1	P47005	663 aa		6.29	□□□□□ -1.4
ATG12	YBR217W	RCR2	Q03446	210 aa	Known RBP	6.29	□□□□□ -1.4
ATG12	YBR217W	RGA2	Q06407	1009 aa		6.29	□□□□□ -1.4
ATG12	YBR217W	MRI1	Q06489	411 aa	Known RBP	6.29	□□□□□ -1.4
ATG12	YBR217W	YAP7	Q08182	245 aa		6.29	□□□□□ -1.4
ATG12	YBR217W	SGT2	Q12118	346 aa	Known RBP	6.29	□□□□□ -1.4
ATG12	YBR217W	HAP2	P06774	265 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	POL3	P15436	1097 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	BIO2	P32451	375 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	RAD54	P32863	898 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	YET1	P35723	206 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	YKL023W	P36103	277 aa	Known RBP	6.28	□□□□□ -1.4
ATG12	YBR217W	ARL1	P38116	183 aa	Known RBP	6.28	□□□□□ -1.4
ATG12	YBR217W	PCM1	P38628	557 aa	Known RBP	6.28	□□□□□ -1.4
ATG12	YBR217W	STB5	P38699	743 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	APM2	P38700	605 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	YHR054C	P38780	354 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	CCC2	P38995	1004 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	YEL023C	P39992	682 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	FTR1	P40088	404 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	MGA2	P40578	1113 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	MAF1	P41910	395 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	YGR130C	P53278	816 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	SSL2	Q00578	843 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	STP1	Q00947	519 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
ATG12	YBR217W	GFD1	Q04839	188 aa	Known RBP	6.28	□□□□□ -1.4
ATG12	YBR217W	HCR1	Q05775	265 aa	Known RBP	6.28	□□□□□ -1.4
ATG12	YBR217W	SPO75	Q07798	868 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	TMA16	Q08687	178 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
ATG12	YBR217W	CCH1	P50077	2039 aa		6.28	□□□□□ -1.4
ATG12	YBR217W	ATE1	P16639	503 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	CYS3	P31373	394 aa	Known RBP	6.27	□□□□□ -1.41
ATG12	YBR217W	CBF2	P32504	956 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	SWI3	P32591	825 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	AGP2	P38090	596 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	KIC1	P38692	1080 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	SIP5	P40210	489 aa	Known RBP	6.27	□□□□□ -1.41
ATG12	YBR217W	POL31	P46957	487 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	NUT1	P53114	1132 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	SPC98	P53540	846 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	YML083C	Q04526	418 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	COG4	Q06096	861 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	IWR1	Q07532	353 aa	Predicted RBP	6.27	□□□□□ -1.41
ATG12	YBR217W	PLP2	Q12017	286 aa		6.27	□□□□□ -1.41
ATG12	YBR217W	NAT1	P12945	854 aa	Known RBP	6.26	□□□□□ -1.41
ATG12	YBR217W	VPS3	P23643	1011 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	PEX1	P24004	1043 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	RRT12	P25381	491 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	SYN8	P31377	255 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	CDC11	P32458	415 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	HMT1	P38074	348 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	TBS1	P38114	1094 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	SPT8	P38915	602 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	MMF1	P40185	145 aa	Known RBP	6.26	□□□□□ -1.41
ATG12	YBR217W	FIG4	P42837	879 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	ALT1	P52893	592 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	EAF7	P53911	425 aa	Known RBP	6.26	□□□□□ -1.41
ATG12	YBR217W	LCD1	Q04377	747 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	YLR257W	Q06146	321 aa	Known RBP	6.26	□□□□□ -1.41
ATG12	YBR217W	ABP140	Q08641	628 aa	Known RBP	6.26	□□□□□ -1.41
ATG12	YBR217W	YDL206W	Q12424	762 aa		6.26	□□□□□ -1.41
ATG12	YBR217W	GAL80	P04387	435 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	CDC42	P19073	191 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	SPO11	P23179	398 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms