RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	MDM38	Q08179	573 aa		1.09	□□□□□ -2.23
snR45	snR45	PNT1	P38969	423 aa		1.08	□□□□□ -2.24
snR45	snR45	UBC9	P50623	157 aa	Predicted RBP	1.08	□□□□□ -2.24
snR45	snR45	PHO2	P07269	559 aa		1.07	□□□□□ -2.24
snR45	snR45	RPC82	P32349	654 aa		1.07	□□□□□ -2.24
snR45	snR45	GLG1	P36143	616 aa		1.07	□□□□□ -2.24
snR45	snR45	MUP3	P38734	546 aa		1.07	□□□□□ -2.24
snR45	snR45	GIC1	P38785	314 aa		1.07	□□□□□ -2.24
snR45	snR45	RPP1	P38786	293 aa		1.07	□□□□□ -2.24
snR45	snR45	SCW4	P53334	386 aa	Known RBP	1.07	□□□□□ -2.24
snR45	snR45	MLH3	Q12083	715 aa		1.07	□□□□□ -2.24
snR45	snR45	SWM1	Q12379	170 aa		1.07	□□□□□ -2.24
snR45	snR45	YBR139W	P38109	508 aa		1.06	□□□□□ -2.24
snR45	snR45	SPC97	P38863	823 aa		1.06	□□□□□ -2.24
snR45	snR45	PIC2	P40035	300 aa		1.06	□□□□□ -2.24
snR45	snR45	CCT5	P40413	562 aa	Known RBP	1.06	□□□□□ -2.24
snR45	snR45	HSV2	P50079	448 aa	Predicted RBP	1.06	□□□□□ -2.24
snR45	snR45	YAP1802	P53309	568 aa		1.06	□□□□□ -2.24
snR45	snR45	FMP30	Q02883	468 aa		1.06	□□□□□ -2.24
snR45	snR45	FAA2	P39518	744 aa		1.05	□□□□□ -2.24
snR45	snR45	SMA2	Q04658	369 aa		1.05	□□□□□ -2.24
snR45	snR45	SPC29	P33419	253 aa		1.04	□□□□□ -2.24
snR45	snR45	HIS7	P33734	552 aa	Known RBP	1.04	□□□□□ -2.24
snR45	snR45	VPS35	P34110	944 aa		1.04	□□□□□ -2.24
snR45	snR45	HXT13	P39924	564 aa		1.04	□□□□□ -2.24
snR45	snR45	ARG2	P40360	574 aa		1.04	□□□□□ -2.24
snR45	snR45	YIR042C	P40586	236 aa		1.04	□□□□□ -2.24
snR45	snR45	CTR1	P49573	406 aa		1.04	□□□□□ -2.24
snR45	snR45	RAI1	P53063	387 aa	Known RBP	1.04	□□□□□ -2.24
snR45	snR45	HXT17	P53631	564 aa		1.04	□□□□□ -2.24
snR45	snR45	HXT15	P54854	567 aa		1.04	□□□□□ -2.24
snR45	snR45	AAT1	Q01802	451 aa		1.04	□□□□□ -2.24
snR45	snR45	ASK1	P35734	292 aa		1.03	□□□□□ -2.24
snR45	snR45	UBS1	P38290	277 aa		1.03	□□□□□ -2.24
snR45	snR45	GGA2	P38817	585 aa	Known RBP	1.03	□□□□□ -2.24
snR45	snR45	SDP1	P40479	209 aa		1.03	□□□□□ -2.24
snR45	snR45	HFD1	Q04458	532 aa		1.03	□□□□□ -2.24
snR45	snR45	SPP382	Q06411	708 aa	Predicted RBP	1.03	□□□□□ -2.24
snR45	snR45	FBP1	P09201	348 aa		1.02	□□□□□ -2.25
snR45	snR45	RPA135	P22138	1203 aa	Known RBP	1.02	□□□□□ -2.25
snR45	snR45	GCD6	P32501	712 aa	Known RBP	1.02	□□□□□ -2.25
snR45	snR45	YKL151C	P36059	337 aa		1.02	□□□□□ -2.25
snR45	snR45	ARC40	P38328	384 aa	Known RBP	1.02	□□□□□ -2.25
snR45	snR45	BCD1	P38772	366 aa		1.02	□□□□□ -2.25
snR45	snR45	PCI8	P40512	444 aa		1.02	□□□□□ -2.25
snR45	snR45	TAX4	P47030	604 aa		1.02	□□□□□ -2.25
snR45	snR45	HRQ1	Q05549	1077 aa		1.02	□□□□□ -2.25
snR45	snR45	LAT1	P12695	482 aa	Known RBP	1.01	□□□□□ -2.25
snR45	snR45	SSA4	P22202	642 aa	Known RBP	1.01	□□□□□ -2.25
snR45	snR45	SAP190	P36123	1033 aa		1.01	□□□□□ -2.25
snR45	snR45	MCM7	P38132	845 aa		1.01	□□□□□ -2.25
snR45	snR45	SEC8	P32855	1065 aa		1	□□□□□ -2.25
snR45	snR45	UBP7	P40453	1071 aa		1	□□□□□ -2.25
snR45	snR45	UBC11	P52492	156 aa		1	□□□□□ -2.25
snR45	snR45	FRT1	Q99332	602 aa		1	□□□□□ -2.25
snR45	snR45	HIR1	P32479	840 aa		0.99	□□□□□ -2.25
snR45	snR45	HOT13	P36078	116 aa		0.99	□□□□□ -2.25
snR45	snR45	EXO84	P38261	753 aa		0.99	□□□□□ -2.25
snR45	snR45	CTF8	P38877	133 aa		0.99	□□□□□ -2.25
snR45	snR45	NPP2	P39997	493 aa		0.99	□□□□□ -2.25
snR45	snR45	SFB2	P53953	876 aa		0.99	□□□□□ -2.25
snR45	snR45	ASM4	Q05166	528 aa		0.99	□□□□□ -2.25
snR45	snR45	TOS4	Q06266	489 aa		0.99	□□□□□ -2.25
snR45	snR45	ADE5,7	P07244	802 aa	Known RBP	0.98	□□□□□ -2.25
snR45	snR45	MPH2	P0CD99	609 aa		0.98	□□□□□ -2.25
snR45	snR45	PYC1	P11154	1178 aa	Known RBP	0.98	□□□□□ -2.25
snR45	snR45	CCR4	P31384	837 aa	Known RBP	0.98	□□□□□ -2.25
snR45	snR45	GNP1	P48813	663 aa		0.98	□□□□□ -2.25
snR45	snR45	TIF35	Q04067	274 aa	Known RBP	0.98	□□□□□ -2.25
snR45	snR45	SSL1	Q04673	461 aa	Predicted RBP	0.98	□□□□□ -2.25
snR45	snR45	ORM2	Q06144	216 aa		0.98	□□□□□ -2.25
snR45	snR45	OXR1	Q08952	273 aa		0.98	□□□□□ -2.25
snR45	snR45	SIR3	P06701	978 aa		0.97	□□□□□ -2.25
snR45	snR45	PRP4	P20053	465 aa	Known RBP	0.97	□□□□□ -2.25
snR45	snR45	YIL169C	P40442	995 aa		0.97	□□□□□ -2.25
snR45	snR45	HOS4	P40480	1083 aa		0.97	□□□□□ -2.25
snR45	snR45	MNT3	P40549	630 aa		0.97	□□□□□ -2.25
snR45	snR45	TRL1	P09880	827 aa	Known RBP	0.96	□□□□□ -2.26
snR45	snR45	SAT4	P25333	603 aa	Known RBP	0.96	□□□□□ -2.26
snR45	snR45	PIN4	P34217	668 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
snR45	snR45	FAA3	P39002	694 aa		0.96	□□□□□ -2.26
snR45	snR45	APJ1	P53940	528 aa		0.96	□□□□□ -2.26
snR45	snR45	NUT2	Q06213	157 aa		0.96	□□□□□ -2.26
snR45	snR45	HXK1	P04806	485 aa	Known RBP	0.95	□□□□□ -2.26
snR45	snR45	UGP1	P32861	499 aa	Known RBP	0.95	□□□□□ -2.26
snR45	snR45	REV7	P38927	245 aa		0.95	□□□□□ -2.26
snR45	snR45	ATG4	P53867	494 aa		0.95	□□□□□ -2.26
snR45	snR45	IRC3	Q06683	689 aa		0.95	□□□□□ -2.26
snR45	snR45	BUD7	Q08754	746 aa		0.95	□□□□□ -2.26
snR45	snR45	PHO4	P07270	312 aa	Known RBP	0.94	□□□□□ -2.26
snR45	snR45	STE13	P33894	931 aa		0.94	□□□□□ -2.26
snR45	snR45	TSL1	P38427	1098 aa	Known RBP	0.94	□□□□□ -2.26
snR45	snR45	YPR196W	Q06595	470 aa		0.94	□□□□□ -2.26
snR45	snR45	NOT3	P06102	836 aa	Known RBP	0.93	□□□□□ -2.26
snR45	snR45	YMC1	P32331	307 aa		0.93	□□□□□ -2.26
snR45	snR45	JHD1	P40034	492 aa		0.93	□□□□□ -2.26
snR45	snR45	VHR1	P40522	640 aa		0.93	□□□□□ -2.26
snR45	snR45	ASI2	P53895	289 aa		0.93	□□□□□ -2.26
snR45	snR45	NRG1	Q03125	231 aa		0.93	□□□□□ -2.26
snR45	snR45	PKH1	Q03407	766 aa		0.93	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms