RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W KIN82P25341 720 aa15.04■□□□□ -0
RPN10YHR200W MUD1P32605 298 aaKnown RBP15.04■□□□□ -0
RPN10YHR200W ERC1P38767 581 aa15.04■□□□□ -0
RPN10YHR200W NPP2P39997 493 aa15.04■□□□□ -0
RPN10YHR200W SDS3P40505 327 aa15.04■□□□□ -0
RPN10YHR200W LCB2P40970 561 aa15.04■□□□□ -0
RPN10YHR200W YJR107WP47145 328 aa15.04■□□□□ -0
RPN10YHR200W MSC2Q03455 724 aa15.04■□□□□ -0
RPN10YHR200W YLR297WQ05899 129 aa15.04■□□□□ -0
RPN10YHR200W FAL1Q12099 399 aaKnown RBP15.04■□□□□ -0
RPN10YHR200W FLR1P38124 548 aa15.03■□□□□ -0
RPN10YHR200W CDC53Q12018 815 aaKnown RBP15.03■□□□□ -0
RPN10YHR200W XRS2P33301 854 aa15.02■□□□□ -0
RPN10YHR200W ATG3P40344 310 aa15.02■□□□□ -0
RPN10YHR200W SCD6P45978 349 aaKnown RBP RIP-Chip data15.02■□□□□ -0not detected
RPN10YHR200W ACF4P47129 309 aa15.02■□□□□ -0
RPN10YHR200W YNL146WP53906 100 aa15.02■□□□□ -0
RPN10YHR200W TSR1Q07381 788 aaKnown RBP15.02■□□□□ -0
RPN10YHR200W MTF2P10849 440 aa15.01□□□□□ -0.01
RPN10YHR200W SEC23P15303 768 aaKnown RBP15.01□□□□□ -0.01
RPN10YHR200W RRP43P25359 394 aaPredicted RBP15.01□□□□□ -0.01
RPN10YHR200W SKG6P32900 734 aaPredicted RBP15.01□□□□□ -0.01
RPN10YHR200W SHQ1P40486 507 aaPredicted RBP15.01□□□□□ -0.01
RPN10YHR200W SCS3P53012 380 aa15.01□□□□□ -0.01
RPN10YHR200W RTP1Q12751 981 aa15.01□□□□□ -0.01
RPN10YHR200W DBP1P24784 617 aaKnown RBP15□□□□□ -0.01
RPN10YHR200W SMC1P32908 1225 aa15□□□□□ -0.01
RPN10YHR200W KSP1P38691 1029 aaKnown RBP15□□□□□ -0.01
RPN10YHR200W SKP2P42843 763 aa15□□□□□ -0.01
RPN10YHR200W ECM7Q06200 448 aa15□□□□□ -0.01
RPN10YHR200W CSR1Q06705 408 aaKnown RBP15□□□□□ -0.01
RPN10YHR200W YOR131CQ12486 218 aa15□□□□□ -0.01
RPN10YHR200W YOL098CQ12496 1037 aa15□□□□□ -0.01
RPN10YHR200W SPO12P17123 173 aa14.99□□□□□ -0.01
RPN10YHR200W PIN4P34217 668 aaKnown RBP RIP-Chip data14.99□□□□□ -0.01not detected
RPN10YHR200W HSH155P49955 971 aaKnown RBP14.99□□□□□ -0.01
RPN10YHR200W ESBP6P53918 673 aa14.99□□□□□ -0.01
RPN10YHR200W DAK1P54838 584 aaKnown RBP14.99□□□□□ -0.01
RPN10YHR200W UTP14Q04500 899 aaKnown RBP14.99□□□□□ -0.01
RPN10YHR200W ATG11Q12527 1178 aa14.99□□□□□ -0.01
RPN10YHR200W PPR1P07272 904 aaPredicted RBP14.98□□□□□ -0.01
RPN10YHR200W PCH2P38126 564 aa14.98□□□□□ -0.01
RPN10YHR200W FTR1P40088 404 aa14.98□□□□□ -0.01
RPN10YHR200W HXT8P40886 569 aa14.98□□□□□ -0.01
RPN10YHR200W IES1P43579 692 aa14.98□□□□□ -0.01
RPN10YHR200W APT1P49435 187 aaKnown RBP14.98□□□□□ -0.01
RPN10YHR200W WHI2P12611 486 aa14.97□□□□□ -0.01
RPN10YHR200W NAT1P12945 854 aaKnown RBP14.97□□□□□ -0.01
RPN10YHR200W PDC6P26263 563 aaKnown RBP14.97□□□□□ -0.01
RPN10YHR200W MSS51P32335 436 aa14.97□□□□□ -0.01
RPN10YHR200W BUD2P33314 1104 aa14.97□□□□□ -0.01
RPN10YHR200W ASN1P49089 572 aaKnown RBP14.97□□□□□ -0.01
RPN10YHR200W BRE5P53741 515 aaKnown RBP14.97□□□□□ -0.01
RPN10YHR200W YDR090CQ03193 310 aa14.97□□□□□ -0.01
RPN10YHR200W SUT2Q12286 268 aa14.97□□□□□ -0.01
RPN10YHR200W JNM1P36224 373 aa14.96□□□□□ -0.01
RPN10YHR200W MMS4P38257 691 aa14.96□□□□□ -0.01
RPN10YHR200W VID24P38263 362 aa14.96□□□□□ -0.01
RPN10YHR200W MCX1P38323 520 aaPredicted RBP14.96□□□□□ -0.01
RPN10YHR200W AIM21P40563 679 aa14.96□□□□□ -0.01
RPN10YHR200W RPA49Q01080 415 aaPredicted RBP14.96□□□□□ -0.01
RPN10YHR200W CUS1Q02554 436 aaPredicted RBP14.96□□□□□ -0.01
RPN10YHR200W PET123P17558 318 aa14.95□□□□□ -0.02
RPN10YHR200W KIP1P28742 1111 aa14.95□□□□□ -0.02
RPN10YHR200W SRB4P32569 687 aa14.95□□□□□ -0.02
RPN10YHR200W TMT1P32643 299 aa14.95□□□□□ -0.02
RPN10YHR200W ENV11P53246 860 aa14.95□□□□□ -0.02
RPN10YHR200W SNF1P06782 633 aaKnown RBP14.94□□□□□ -0.02
RPN10YHR200W SWI3P32591 825 aa14.94□□□□□ -0.02
RPN10YHR200W BCS1P32839 456 aa14.94□□□□□ -0.02
RPN10YHR200W RAD54P32863 898 aa14.94□□□□□ -0.02
RPN10YHR200W ORC5P50874 479 aa14.94□□□□□ -0.02
RPN10YHR200W VPS60Q03390 229 aa14.94□□□□□ -0.02
RPN10YHR200W TRS130Q03660 1102 aa14.94□□□□□ -0.02
RPN10YHR200W PIB1Q06651 286 aa14.94□□□□□ -0.02
RPN10YHR200W ECM29P38737 1868 aa14.94□□□□□ -0.02
RPN10YHR200W PAH1P32567 862 aa14.93□□□□□ -0.02
RPN10YHR200W STO1P34160 861 aaKnown RBP14.93□□□□□ -0.02
RPN10YHR200W PAM1P37304 830 aaKnown RBP14.93□□□□□ -0.02
RPN10YHR200W MNP1P53163 194 aaPredicted RBP14.93□□□□□ -0.02
RPN10YHR200W TPO2P53283 614 aa14.93□□□□□ -0.02
RPN10YHR200W YML082WQ04533 649 aaKnown RBP14.93□□□□□ -0.02
RPN10YHR200W DAS2Q12084 232 aa14.93□□□□□ -0.02
RPN10YHR200W MDM20Q12387 796 aaKnown RBP14.93□□□□□ -0.02
RPN10YHR200W YDL206WQ12424 762 aa14.93□□□□□ -0.02
RPN10YHR200W TOM70P07213 617 aaKnown RBP14.92□□□□□ -0.02
RPN10YHR200W MRX3P38172 270 aa14.92□□□□□ -0.02
RPN10YHR200W NDC80P40460 691 aa14.92□□□□□ -0.02
RPN10YHR200W SGM1P47166 707 aa14.92□□□□□ -0.02
RPN10YHR200W PET111P08468 800 aa14.91□□□□□ -0.02
RPN10YHR200W TUP1P16649 713 aa14.91□□□□□ -0.02
RPN10YHR200W SPT5P27692 1063 aaKnown RBP14.91□□□□□ -0.02
RPN10YHR200W SEC21P32074 935 aaKnown RBP14.91□□□□□ -0.02
RPN10YHR200W ALD5P40047 520 aaKnown RBP14.91□□□□□ -0.02
RPN10YHR200W PRY3P47033 881 aa14.91□□□□□ -0.02
RPN10YHR200W TBF1Q02457 562 aa14.91□□□□□ -0.02
RPN10YHR200W ULP1Q02724 621 aa14.91□□□□□ -0.02
RPN10YHR200W HOS3Q02959 697 aaKnown RBP14.91□□□□□ -0.02
RPN10YHR200W RGA2Q06407 1009 aa14.91□□□□□ -0.02
RPN10YHR200W IWR1Q07532 353 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 5,963 RNA–protein pairs in 77.8 ms