RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C KEL2P50090 882 aa3.51□□□□□ -1.85
CDH1YGL003C TAN1P53072 289 aaPredicted RBP3.51□□□□□ -1.85
CDH1YGL003C YGR016WP53209 190 aa3.51□□□□□ -1.85
CDH1YGL003C NCE103P53615 221 aa3.51□□□□□ -1.85
CDH1YGL003C YNR014WP53719 212 aa3.51□□□□□ -1.85
CDH1YGL003C VTC3Q02725 835 aa3.51□□□□□ -1.85
CDH1YGL003C MDM38Q08179 573 aa3.51□□□□□ -1.85
CDH1YGL003C YPL066WQ12194 479 aa3.51□□□□□ -1.85
CDH1YGL003C NYV1Q12255 253 aa3.51□□□□□ -1.85
CDH1YGL003C TRM3Q07527 1436 aa3.51□□□□□ -1.85
CDH1YGL003C NAT1P12945 854 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C SRM1P21827 482 aa3.5□□□□□ -1.85
CDH1YGL003C RET1P22276 1149 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C NFS1P25374 497 aa3.5□□□□□ -1.85
CDH1YGL003C AAD3P25612 363 aa3.5□□□□□ -1.85
CDH1YGL003C CDC60P26637 1090 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C URA1P28272 314 aaPredicted RBP3.5□□□□□ -1.85
CDH1YGL003C CBF5P33322 483 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
CDH1YGL003C STO1P34160 861 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C BYE1P36106 594 aa3.5□□□□□ -1.85
CDH1YGL003C RKM3P38222 552 aa3.5□□□□□ -1.85
CDH1YGL003C RXT2P38255 430 aa3.5□□□□□ -1.85
CDH1YGL003C MED8P38304 223 aa3.5□□□□□ -1.85
CDH1YGL003C EAF1Q06337 982 aa3.5□□□□□ -1.85
CDH1YGL003C CDC45Q08032 650 aa3.5□□□□□ -1.85
CDH1YGL003C HRK1Q08732 759 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C YLR125WQ12138 136 aa3.5□□□□□ -1.85
CDH1YGL003C DBP10Q12389 995 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C HIR3P47171 1648 aa3.5□□□□□ -1.85
CDH1YGL003C KOG1P38873 1557 aa3.5□□□□□ -1.85
CDH1YGL003C ERR1P0CX10 437 aa3.5□□□□□ -1.85
CDH1YGL003C ERR2P0CX11 437 aa3.5□□□□□ -1.85
CDH1YGL003C HOM3P10869 527 aa3.5□□□□□ -1.85
CDH1YGL003C APN1P22936 367 aa3.5□□□□□ -1.85
CDH1YGL003C CLB1P24868 471 aa3.5□□□□□ -1.85
CDH1YGL003C ARE1P25628 610 aa3.5□□□□□ -1.85
CDH1YGL003C RSC6P25632 483 aa3.5□□□□□ -1.85
CDH1YGL003C THI4P32318 326 aa3.5□□□□□ -1.85
CDH1YGL003C PEX6P33760 1030 aa3.5□□□□□ -1.85
CDH1YGL003C RPC37P36121 282 aa3.5□□□□□ -1.85
CDH1YGL003C TRZ1P36159 838 aaPredicted RBP3.5□□□□□ -1.85
CDH1YGL003C RPN3P40016 523 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C HUL4P40985 892 aa3.5□□□□□ -1.85
CDH1YGL003C BUD9P53226 547 aa3.5□□□□□ -1.85
CDH1YGL003C RSC1P53236 928 aa3.5□□□□□ -1.85
CDH1YGL003C BTN2P53286 410 aa3.5□□□□□ -1.85
CDH1YGL003C HOL1P53389 586 aa3.5□□□□□ -1.85
CDH1YGL003C PAP2P53632 584 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C YNR029CP53729 429 aaKnown RBP3.5□□□□□ -1.85
CDH1YGL003C UBX4P54730 416 aa3.5□□□□□ -1.85
CDH1YGL003C SPP382Q06411 708 aaPredicted RBP3.5□□□□□ -1.85
CDH1YGL003C YLH47Q06493 454 aa3.5□□□□□ -1.85
CDH1YGL003C YPL191CQ08930 360 aa3.5□□□□□ -1.85
CDH1YGL003C NUP159P40477 1460 aa3.49□□□□□ -1.85
CDH1YGL003C PDR5P33302 1511 aaKnown RBP3.49□□□□□ -1.85
CDH1YGL003C RED1P14291 827 aa3.49□□□□□ -1.85
CDH1YGL003C GFD2P25370 566 aaKnown RBP3.49□□□□□ -1.85
CDH1YGL003C TRK2P28584 889 aa3.49□□□□□ -1.85
CDH1YGL003C KIP1P28742 1111 aa3.49□□□□□ -1.85
CDH1YGL003C MRS6P32864 603 aaKnown RBP3.49□□□□□ -1.85
CDH1YGL003C NIP100P33420 868 aa3.49□□□□□ -1.85
CDH1YGL003C GPT2P36148 743 aa3.49□□□□□ -1.85
CDH1YGL003C MCX1P38323 520 aaPredicted RBP3.49□□□□□ -1.85
CDH1YGL003C MBP1P39678 833 aa3.49□□□□□ -1.85
CDH1YGL003C MXR1P40029 184 aa3.49□□□□□ -1.85
CDH1YGL003C SIP5P40210 489 aaKnown RBP3.49□□□□□ -1.85
CDH1YGL003C SBE2P42223 864 aaKnown RBP3.49□□□□□ -1.85
CDH1YGL003C ALR2P43553 858 aa3.49□□□□□ -1.85
CDH1YGL003C VTC2P43585 828 aa3.49□□□□□ -1.85
CDH1YGL003C ATP22P50273 684 aaPredicted RBP3.49□□□□□ -1.85
CDH1YGL003C ERO1Q03103 563 aa3.49□□□□□ -1.85
CDH1YGL003C PSR1Q07800 427 aa3.49□□□□□ -1.85
CDH1YGL003C BMS1Q08965 1183 aaKnown RBP3.49□□□□□ -1.85
CDH1YGL003C SPO21Q12411 609 aa3.49□□□□□ -1.85
CDH1YGL003C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
CDH1YGL003C AI3P03877 415 aa3.48□□□□□ -1.85
CDH1YGL003C CAN1P04817 590 aa3.48□□□□□ -1.85
CDH1YGL003C PGI1P12709 554 aaKnown RBP3.48□□□□□ -1.85
CDH1YGL003C YEF3P16521 1044 aaKnown RBP3.48□□□□□ -1.85
CDH1YGL003C DEP1P31385 405 aa3.48□□□□□ -1.85
CDH1YGL003C HIR1P32479 840 aa3.48□□□□□ -1.85
CDH1YGL003C PTH2P34222 208 aa3.48□□□□□ -1.85
CDH1YGL003C YKL222CP35995 705 aa3.48□□□□□ -1.85
CDH1YGL003C ABZ1P37254 787 aaPredicted RBP3.48□□□□□ -1.85
CDH1YGL003C PNT1P38969 423 aa3.48□□□□□ -1.85
CDH1YGL003C SAP185P40856 1058 aa3.48□□□□□ -1.85
CDH1YGL003C RNT1Q02555 471 aa3.48□□□□□ -1.85
CDH1YGL003C TAF8Q03750 510 aa3.48□□□□□ -1.85
CDH1YGL003C ISA1Q07821 250 aaPredicted RBP3.48□□□□□ -1.85
CDH1YGL003C RUD3Q12234 484 aaKnown RBP3.48□□□□□ -1.85
CDH1YGL003C TSC11P40061 1430 aa3.48□□□□□ -1.85
CDH1YGL003C ESC1Q03661 1658 aaKnown RBP3.48□□□□□ -1.85
CDH1YGL003C PIF1P07271 859 aa3.47□□□□□ -1.85
CDH1YGL003C YER152CP10356 443 aa3.47□□□□□ -1.85
CDH1YGL003C CMP2P14747 604 aa3.47□□□□□ -1.85
CDH1YGL003C RPL8AP17076 256 aaKnown RBP3.47□□□□□ -1.85
CDH1YGL003C RPL5P26321 297 aaKnown RBP3.47□□□□□ -1.85
CDH1YGL003C PXA2P34230 853 aa3.47□□□□□ -1.85
CDH1YGL003C SAP190P36123 1033 aa3.47□□□□□ -1.85
CDH1YGL003C NOP4P37838 685 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms