RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W NBA1Q08229 501 aaKnown RBP2.31□□□□□ -2.04
CTF4YPR135W YKU70P32807 602 aa2.3□□□□□ -2.04
CTF4YPR135W QNS1P38795 714 aaKnown RBP2.3□□□□□ -2.04
CTF4YPR135W SUN4P53616 420 aa2.3□□□□□ -2.04
CTF4YPR135W YML122CQ03207 126 aa2.3□□□□□ -2.04
CTF4YPR135W GRX6Q12438 231 aa2.3□□□□□ -2.04
CTF4YPR135W LYS2P07702 1392 aa2.3□□□□□ -2.04
CTF4YPR135W MSM1P22438 575 aa2.29□□□□□ -2.04
CTF4YPR135W HCM1P25364 564 aa2.29□□□□□ -2.04
CTF4YPR135W YHR131CP38835 850 aa2.29□□□□□ -2.04
CTF4YPR135W ENV11P53246 860 aa2.29□□□□□ -2.04
CTF4YPR135W NOG1Q02892 647 aaKnown RBP2.29□□□□□ -2.04
CTF4YPR135W PLB2Q03674 706 aa2.29□□□□□ -2.04
CTF4YPR135W TMA10Q06177 86 aa2.29□□□□□ -2.04
CTF4YPR135W COQ4O13525 335 aa2.29□□□□□ -2.04
CTF4YPR135W PUF4P25339 888 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04 RIP-Chip
CTF4YPR135W PAH1P32567 862 aa2.29□□□□□ -2.04
CTF4YPR135W GRS1P38088 690 aaKnown RBP2.29□□□□□ -2.04
CTF4YPR135W GPB2P39717 880 aa2.29□□□□□ -2.04
CTF4YPR135W GPI13Q07830 1017 aa2.29□□□□□ -2.04
CTF4YPR135W SPO21Q12411 609 aa2.29□□□□□ -2.04
CTF4YPR135W CDC3P32457 520 aaKnown RBP2.28□□□□□ -2.04
CTF4YPR135W UGA4P32837 571 aa2.28□□□□□ -2.04
CTF4YPR135W RSM26P47141 266 aa2.28□□□□□ -2.04
CTF4YPR135W MCM6P53091 1017 aaKnown RBP2.28□□□□□ -2.04
CTF4YPR135W TAF8Q03750 510 aa2.28□□□□□ -2.04
CTF4YPR135W DUS4Q06063 367 aa2.28□□□□□ -2.04
CTF4YPR135W YCS4Q06156 1176 aa2.28□□□□□ -2.04
CTF4YPR135W RRT6P53117 311 aaPredicted RBP2.28□□□□□ -2.04
CTF4YPR135W YGR117CP53270 476 aa2.28□□□□□ -2.04
CTF4YPR135W ULP1Q02724 621 aa2.28□□□□□ -2.04
CTF4YPR135W CTI6Q08923 506 aa2.28□□□□□ -2.04
CTF4YPR135W TOR1P35169 2470 aa2.27□□□□□ -2.05
CTF4YPR135W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
CTF4YPR135W RPS24AP0CX31 135 aaKnown RBP2.27□□□□□ -2.05
CTF4YPR135W RPS24BP0CX32 135 aaKnown RBP2.27□□□□□ -2.05
CTF4YPR135W SEN54Q02825 467 aaPredicted RBP2.27□□□□□ -2.05
CTF4YPR135W RSB1Q08417 382 aa2.27□□□□□ -2.05
CTF4YPR135W FRT1Q99332 602 aa2.27□□□□□ -2.05
CTF4YPR135W TRL1P09880 827 aaKnown RBP2.27□□□□□ -2.05
CTF4YPR135W CMP2P14747 604 aa2.27□□□□□ -2.05
CTF4YPR135W CCZ1P38273 704 aa2.27□□□□□ -2.05
CTF4YPR135W PNT1P38969 423 aa2.27□□□□□ -2.05
CTF4YPR135W AIM21P40563 679 aa2.27□□□□□ -2.05
CTF4YPR135W SEC26P41810 973 aaKnown RBP2.27□□□□□ -2.05
CTF4YPR135W RBA50Q04418 439 aa2.27□□□□□ -2.05
CTF4YPR135W GAL10P04397 699 aa2.27□□□□□ -2.05
CTF4YPR135W CDC20P26309 610 aa2.27□□□□□ -2.05
CTF4YPR135W KIP1P28742 1111 aa2.27□□□□□ -2.05
CTF4YPR135W HNT2P49775 206 aa2.27□□□□□ -2.05
CTF4YPR135W SAM37P50110 327 aa2.27□□□□□ -2.05
CTF4YPR135W PHO23P50947 330 aa2.27□□□□□ -2.05
CTF4YPR135W YLR225CQ05948 407 aaKnown RBP2.27□□□□□ -2.05
CTF4YPR135W ECM30Q06673 1274 aa2.27□□□□□ -2.05
CTF4YPR135W NTO1Q12311 748 aa2.27□□□□□ -2.05
CTF4YPR135W VMA4P22203 233 aaKnown RBP2.26□□□□□ -2.05
CTF4YPR135W LST4P34239 828 aa2.26□□□□□ -2.05
CTF4YPR135W SQT1P35184 431 aa2.26□□□□□ -2.05
CTF4YPR135W VPS53P47061 822 aa2.26□□□□□ -2.05
CTF4YPR135W OSM1P21375 501 aaKnown RBP2.26□□□□□ -2.05
CTF4YPR135W CIC1P38779 376 aaKnown RBP2.26□□□□□ -2.05
CTF4YPR135W PEX28P38848 579 aa2.26□□□□□ -2.05
CTF4YPR135W MNN10P50108 393 aaKnown RBP2.26□□□□□ -2.05
CTF4YPR135W TNA1P53322 534 aa2.26□□□□□ -2.05
CTF4YPR135W NUT2Q06213 157 aa2.26□□□□□ -2.05
CTF4YPR135W RXT3Q07458 294 aa2.26□□□□□ -2.05
CTF4YPR135W ACK1Q07622 623 aaPredicted RBP2.26□□□□□ -2.05
CTF4YPR135W TOM1Q03280 3268 aa2.26□□□□□ -2.05
CTF4YPR135W RAD53P22216 821 aa2.25□□□□□ -2.05
CTF4YPR135W DOM34P33309 386 aa2.25□□□□□ -2.05
CTF4YPR135W ADD66P36040 267 aa2.25□□□□□ -2.05
CTF4YPR135W PAF1P38351 445 aa2.25□□□□□ -2.05
CTF4YPR135W TRM44Q02648 567 aaKnown RBP2.25□□□□□ -2.05
CTF4YPR135W IRC3Q06683 689 aa2.25□□□□□ -2.05
CTF4YPR135W FLO1P32768 1537 aa2.25□□□□□ -2.05
CTF4YPR135W SRM1P21827 482 aa2.25□□□□□ -2.05
CTF4YPR135W PMI40P29952 429 aaKnown RBP2.25□□□□□ -2.05
CTF4YPR135W CHS7P38843 316 aa2.25□□□□□ -2.05
CTF4YPR135W MDJ2P42834 146 aa2.25□□□□□ -2.05
CTF4YPR135W CTF4Q01454 927 aa2.25□□□□□ -2.05
CTF4YPR135W GPB1Q08886 897 aa2.25□□□□□ -2.05
CTF4YPR135W AHC1Q12433 566 aa2.25□□□□□ -2.05
CTF4YPR135W LEU2P04173 364 aaPredicted RBP2.24□□□□□ -2.05
CTF4YPR135W STE11P23561 717 aa2.24□□□□□ -2.05
CTF4YPR135W AFG2P32794 780 aa2.24□□□□□ -2.05
CTF4YPR135W SSF1P38789 453 aaPredicted RBP2.24□□□□□ -2.05
CTF4YPR135W ERP5P38819 212 aa2.24□□□□□ -2.05
CTF4YPR135W PIK1P39104 1066 aa2.24□□□□□ -2.05
CTF4YPR135W YFL040WP43562 540 aa2.24□□□□□ -2.05
CTF4YPR135W HOS3Q02959 697 aaKnown RBP2.24□□□□□ -2.05
CTF4YPR135W YAP6Q03935 383 aa2.24□□□□□ -2.05
CTF4YPR135W RKM2Q03942 479 aa2.24□□□□□ -2.05
CTF4YPR135W RSM24Q03976 319 aa2.24□□□□□ -2.05
CTF4YPR135W BDF2Q07442 638 aa2.24□□□□□ -2.05
CTF4YPR135W PTC5Q12511 572 aa2.24□□□□□ -2.05
CTF4YPR135W DED1P06634 604 aaKnown RBP2.24□□□□□ -2.05
CTF4YPR135W CDC6P09119 513 aa2.24□□□□□ -2.05
CTF4YPR135W LPD1P09624 499 aaKnown RBP2.24□□□□□ -2.05
CTF4YPR135W HPR1P17629 752 aaKnown RBP2.24□□□□□ -2.05
CTF4YPR135W SNF5P18480 905 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms