RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	GPT2	P36148	743 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	UBP13	P38187	747 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	SPT8	P38915	602 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	EAF5	P39995	279 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	TFG2	P41896	400 aa	Predicted RBP	10.74	□□□□□ -0.69
TIF6	YPR016C	PRY3	P47033	881 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	COQ9	Q05779	260 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	YAP7	Q08182	245 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	TCO89	Q08921	799 aa		10.74	□□□□□ -0.69
TIF6	YPR016C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	10.73	□□□□□ -0.69	not detected
TIF6	YPR016C	RPC53	P25441	422 aa		10.73	□□□□□ -0.69
TIF6	YPR016C	MCM2	P29469	868 aa		10.73	□□□□□ -0.69
TIF6	YPR016C	RPC25	P35718	212 aa		10.73	□□□□□ -0.69
TIF6	YPR016C	CCM1	P48237	864 aa	Predicted RBP	10.73	□□□□□ -0.69
TIF6	YPR016C	DAK1	P54838	584 aa	Known RBP	10.73	□□□□□ -0.69
TIF6	YPR016C	PHO8	P11491	566 aa		10.72	□□□□□ -0.69
TIF6	YPR016C	MSH3	P25336	1018 aa		10.72	□□□□□ -0.69
TIF6	YPR016C	RME1	P32338	300 aa	Known RBP	10.72	□□□□□ -0.69
TIF6	YPR016C	PAH1	P32567	862 aa		10.72	□□□□□ -0.69
TIF6	YPR016C	YSC83	P32792	385 aa		10.72	□□□□□ -0.69
TIF6	YPR016C	ACF4	P47129	309 aa		10.72	□□□□□ -0.69
TIF6	YPR016C	MAM3	Q12296	706 aa		10.72	□□□□□ -0.69
TIF6	YPR016C	MED1	Q12321	566 aa		10.72	□□□□□ -0.69
TIF6	YPR016C	UBC1	P21734	215 aa	Known RBP	10.71	□□□□□ -0.69
TIF6	YPR016C	NAM7	P30771	971 aa	Known RBP	10.71	□□□□□ -0.69
TIF6	YPR016C	EFT1	P32324	842 aa	Known RBP	10.71	□□□□□ -0.69
TIF6	YPR016C	COT1	P32798	439 aa		10.71	□□□□□ -0.69
TIF6	YPR016C	SMY2	P32909	740 aa	Known RBP	10.71	□□□□□ -0.69
TIF6	YPR016C	MPE1	P35728	441 aa	Known RBP	10.71	□□□□□ -0.69
TIF6	YPR016C	SAP190	P36123	1033 aa		10.71	□□□□□ -0.69
TIF6	YPR016C	AFG3	P39925	761 aa		10.71	□□□□□ -0.69
TIF6	YPR016C	UBP5	P39944	805 aa		10.71	□□□□□ -0.69
TIF6	YPR016C	CAF130	P53280	1122 aa	Predicted RBP	10.71	□□□□□ -0.69
TIF6	YPR016C	RTT102	P53330	157 aa		10.71	□□□□□ -0.69
TIF6	YPR016C	MSC2	Q03455	724 aa		10.71	□□□□□ -0.69
TIF6	YPR016C	CUR1	Q06469	252 aa		10.71	□□□□□ -0.69
TIF6	YPR016C	ATG11	Q12527	1178 aa		10.71	□□□□□ -0.69
TIF6	YPR016C	MAK16	P10962	306 aa	Predicted RBP	10.7	□□□□□ -0.7
TIF6	YPR016C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	10.7	□□□□□ -0.7	not detected
TIF6	YPR016C	SEC65	P29478	273 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	CTM1	P38818	585 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	SAD1	P43589	448 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	VID30	P53076	958 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	TAM41	P53230	385 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	TPO2	P53283	614 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	VPS62	P53285	467 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	SPO75	Q07798	868 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	MDM20	Q12387	796 aa	Known RBP	10.7	□□□□□ -0.7
TIF6	YPR016C	RTP1	Q12751	981 aa		10.7	□□□□□ -0.7
TIF6	YPR016C	RPS6A	P0CX37	236 aa	Known RBP	10.69	□□□□□ -0.7
TIF6	YPR016C	RPS6B	P0CX38	236 aa	Predicted RBP	10.69	□□□□□ -0.7
TIF6	YPR016C	VPS35	P34110	944 aa		10.69	□□□□□ -0.7
TIF6	YPR016C	MNN4	P36044	1178 aa		10.69	□□□□□ -0.7
TIF6	YPR016C	SHM1	P37292	490 aa	Predicted RBP	10.69	□□□□□ -0.7
TIF6	YPR016C	MIP6	P38760	659 aa	Known RBP	10.69	□□□□□ -0.7
TIF6	YPR016C	COG4	Q06096	861 aa		10.69	□□□□□ -0.7
TIF6	YPR016C	IES4	Q08561	116 aa		10.69	□□□□□ -0.7
TIF6	YPR016C	SNA3	P14359	133 aa		10.68	□□□□□ -0.7
TIF6	YPR016C	GUA1	P38625	525 aa	Known RBP	10.68	□□□□□ -0.7
TIF6	YPR016C	FYV8	P46949	817 aa	Known RBP	10.68	□□□□□ -0.7
TIF6	YPR016C	YNL146W	P53906	100 aa		10.68	□□□□□ -0.7
TIF6	YPR016C	YDR090C	Q03193	310 aa		10.68	□□□□□ -0.7
TIF6	YPR016C	VPS72	Q03388	795 aa		10.68	□□□□□ -0.7
TIF6	YPR016C	MLH2	Q07980	695 aa		10.68	□□□□□ -0.7
TIF6	YPR016C	OSW2	Q12202	724 aa		10.68	□□□□□ -0.7
TIF6	YPR016C	KTR2	P33550	425 aa		10.67	□□□□□ -0.7
TIF6	YPR016C	RTT107	P38850	1070 aa		10.67	□□□□□ -0.7
TIF6	YPR016C	LCB2	P40970	561 aa		10.67	□□□□□ -0.7
TIF6	YPR016C	VPS75	P53853	264 aa		10.67	□□□□□ -0.7
TIF6	YPR016C	CWC2	Q12046	339 aa	Predicted RBP	10.67	□□□□□ -0.7
TIF6	YPR016C	HIF1	Q12373	385 aa		10.67	□□□□□ -0.7
TIF6	YPR016C	CHS2	P14180	963 aa		10.66	□□□□□ -0.7
TIF6	YPR016C	VTC3	Q02725	835 aa		10.66	□□□□□ -0.7
TIF6	YPR016C	YML020W	Q03722	664 aa		10.66	□□□□□ -0.7
TIF6	YPR016C	GIR2	Q03768	265 aa	Predicted RBP	10.66	□□□□□ -0.7
TIF6	YPR016C	PHO13	P19881	312 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	AFT1	P22149	690 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	SPO11	P23179	398 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	MUD1	P32605	298 aa	Known RBP	10.65	□□□□□ -0.7
TIF6	YPR016C	UIP5	P36137	443 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	LDH1	P38139	375 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	AIM21	P40563	679 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	CUL3	P53202	744 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	TIM8	P57744	87 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	HFI1	Q12060	488 aa		10.65	□□□□□ -0.7
TIF6	YPR016C	FAL1	Q12099	399 aa	Known RBP	10.65	□□□□□ -0.7
TIF6	YPR016C	MOT1	P32333	1867 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	SWI6	P09959	803 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	SSB1	P11484	613 aa	Known RBP	10.64	□□□□□ -0.71
TIF6	YPR016C	APL1	P27351	700 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	MSS51	P32335	436 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	DUR3	P33413	735 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	PAM1	P37304	830 aa	Known RBP	10.64	□□□□□ -0.71
TIF6	YPR016C	VID24	P38263	362 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	LEO1	P38439	464 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	SSB2	P40150	613 aa	Known RBP	10.64	□□□□□ -0.71
TIF6	YPR016C	JJJ3	P47138	172 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	STR2	P47164	639 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	ORC5	P50874	479 aa		10.64	□□□□□ -0.71
TIF6	YPR016C	ENV11	P53246	860 aa		10.64	□□□□□ -0.71

Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms