RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	MSH3	P25336	1018 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	SWI3	P32591	825 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	ECM32	P32644	1121 aa	Known RBP	1.68	□□□□□ -2.14
CLU1	YMR012W	YKL133C	P36066	463 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	YKR075C	P36155	307 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	SPR3	P41901	512 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	ACF4	P47129	309 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	CRF1	Q04930	467 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	FMP25	Q08023	583 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	YDR056C	Q12025	205 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	YCL002C	P25565	263 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	CHZ1	P40019	153 aa	Predicted RBP	1.68	□□□□□ -2.14
CLU1	YMR012W	MET13	P53128	600 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	SVL3	Q03088	825 aa	Known RBP	1.68	□□□□□ -2.14
CLU1	YMR012W	YPR097W	Q06839	1073 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	NUR1	Q12066	484 aa		1.68	□□□□□ -2.14
CLU1	YMR012W	MRP10	O75012	95 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	GAL1	P04385	528 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	GCD6	P32501	712 aa	Known RBP	1.67	□□□□□ -2.14
CLU1	YMR012W	MTC2	P34246	357 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	CIC1	P38779	376 aa	Known RBP	1.67	□□□□□ -2.14
CLU1	YMR012W	PSY2	P40164	858 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	SPC105	P53148	917 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	YNL193W	P53870	558 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	UBX2	Q04228	584 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	IRC3	Q06683	689 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	PRT1	P06103	763 aa	Known RBP	1.67	□□□□□ -2.14
CLU1	YMR012W	PIF1	P07271	859 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	MSM1	P22438	575 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	GDH3	P39708	457 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	EAF5	P39995	279 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	GPG1	P53130	126 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	COX18	P53239	316 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	ISA1	Q07821	250 aa	Predicted RBP	1.67	□□□□□ -2.14
CLU1	YMR012W	HAL9	Q12180	1030 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	CSR2	Q12734	1121 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	FOB1	O13329	566 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	HXK1	P04806	485 aa	Known RBP	1.67	□□□□□ -2.14
CLU1	YMR012W	DUT1	P33317	147 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	AFG3	P39925	761 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	DLD3	P39976	496 aa	Known RBP	1.67	□□□□□ -2.14
CLU1	YMR012W	TIM10	P87108	93 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	GTR1	Q00582	310 aa		1.67	□□□□□ -2.14
CLU1	YMR012W	RPS21A	P0C0V8	87 aa	Known RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	STE6	P12866	1290 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	CDC34	P14682	295 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	GPD2	P41911	440 aa	Known RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	RSC8	P43609	557 aa	Known RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	RPA14	P50106	137 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	PPT1	P53043	513 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	ITC1	P53125	1264 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	AHC1	Q12433	566 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	YML133C	Q03099	1374 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	COB	P00163	385 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	SFL1	P20134	766 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	SWI4	P25302	1093 aa	Known RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	YKU70	P32807	602 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	MTH1	P35198	433 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	CHS7	P38843	316 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	AIM46	P38885	310 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	GEM1	P39722	662 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	NEO1	P40527	1151 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	SEC26	P41810	973 aa	Known RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	SHR5	P41912	237 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	YNR040W	P53736	256 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	KIN4	Q01919	800 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	SSL1	Q04673	461 aa	Predicted RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	YCS4	Q06156	1176 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	BRE1	Q07457	700 aa	Known RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	PSR1	Q07800	427 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	YOL087C	Q99247	1116 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	TY4B-H	P0C2J7	1802 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	PAT1	P25644	796 aa	Known RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	SPT5	P27692	1063 aa	Known RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	POP2	P39008	433 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	TAN1	P53072	289 aa	Predicted RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	YMR206W	Q03695	313 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	SPP382	Q06411	708 aa	Predicted RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	GUD1	Q07729	489 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	LSO1	Q3E827	93 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	HBN1	Q96VH4	193 aa		1.66	□□□□□ -2.14
CLU1	YMR012W	HSH49	Q99181	213 aa	Predicted RBP	1.66	□□□□□ -2.14
CLU1	YMR012W	SBP1	P10080	294 aa	Known RBP	1.65	□□□□□ -2.14
CLU1	YMR012W	PGI1	P12709	554 aa	Known RBP	1.65	□□□□□ -2.14
CLU1	YMR012W	EST1	P17214	699 aa	Predicted RBP	1.65	□□□□□ -2.14
CLU1	YMR012W	AAC3	P18238	307 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	NAM7	P30771	971 aa	Known RBP	1.65	□□□□□ -2.14
CLU1	YMR012W	MCM10	P32354	571 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	RER2	P35196	286 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	BLI1	P35727	113 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	SIS2	P36024	562 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	YTA6	P40328	754 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	RIA1	P53893	1110 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	HDA2	Q06629	674 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	YPL066W	Q12194	479 aa		1.65	□□□□□ -2.14
CLU1	YMR012W	CDC4	P07834	779 aa		1.65	□□□□□ -2.15
CLU1	YMR012W	SRD1	P09007	221 aa		1.65	□□□□□ -2.15
CLU1	YMR012W	FUR1	P18562	216 aa	Known RBP	1.65	□□□□□ -2.15
CLU1	YMR012W	KCC4	P25389	1037 aa		1.65	□□□□□ -2.15
CLU1	YMR012W	GAR1	P28007	205 aa	Known RBP	1.65	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 49 ms