RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W YMR321CQ04898 105 aa15.17■□□□□ 0.02
RPN10YHR200W YLR287CQ05881 355 aa15.17■□□□□ 0.02
RPN10YHR200W YDL057WQ07379 328 aa15.17■□□□□ 0.02
RPN10YHR200W YOL075CQ08234 1294 aa15.17■□□□□ 0.02
RPN10YHR200W NCS6P53088 359 aa15.16■□□□□ 0.02
RPN10YHR200W SPO75Q07798 868 aa15.16■□□□□ 0.02
RPN10YHR200W GPI13Q07830 1017 aa15.16■□□□□ 0.02
RPN10YHR200W ICL2Q12031 575 aa15.16■□□□□ 0.02
RPN10YHR200W SEC65P29478 273 aa15.15■□□□□ 0.02
RPN10YHR200W RME1P32338 300 aaKnown RBP15.15■□□□□ 0.02
RPN10YHR200W GPT2P36148 743 aa15.15■□□□□ 0.02
RPN10YHR200W PGM2P37012 569 aaKnown RBP15.15■□□□□ 0.02
RPN10YHR200W NOC3Q07896 663 aaPredicted RBP15.15■□□□□ 0.02
RPN10YHR200W SSB1P11484 613 aaKnown RBP15.14■□□□□ 0.01
RPN10YHR200W YUR1P26725 428 aa15.14■□□□□ 0.01
RPN10YHR200W COT1P32798 439 aa15.14■□□□□ 0.01
RPN10YHR200W SSB2P40150 613 aaKnown RBP15.14■□□□□ 0.01
RPN10YHR200W PSP2P50109 593 aaKnown RBP15.14■□□□□ 0.01
RPN10YHR200W ROD1Q02805 837 aa15.14■□□□□ 0.01
RPN10YHR200W YML020WQ03722 664 aa15.14■□□□□ 0.01
RPN10YHR200W RLP24Q07915 199 aaKnown RBP15.14■□□□□ 0.01
RPN10YHR200W OSW2Q12202 724 aa15.14■□□□□ 0.01
RPN10YHR200W RPS6AP0CX37 236 aaKnown RBP15.13■□□□□ 0.01
RPN10YHR200W RPS6BP0CX38 236 aaPredicted RBP15.13■□□□□ 0.01
RPN10YHR200W DAL7P21826 554 aa15.13■□□□□ 0.01
RPN10YHR200W POX1P13711 748 aa15.12■□□□□ 0.01
RPN10YHR200W MFT1P33441 392 aaKnown RBP15.12■□□□□ 0.01
RPN10YHR200W RPC25P35718 212 aa15.12■□□□□ 0.01
RPN10YHR200W EAF5P39995 279 aa15.12■□□□□ 0.01
RPN10YHR200W STU2P46675 888 aa15.12■□□□□ 0.01
RPN10YHR200W RPS7BP48164 190 aaKnown RBP15.12■□□□□ 0.01
RPN10YHR200W CAF130P53280 1122 aaPredicted RBP15.12■□□□□ 0.01
RPN10YHR200W ARK1P53974 638 aa15.12■□□□□ 0.01
RPN10YHR200W CTR9P89105 1077 aa15.12■□□□□ 0.01
RPN10YHR200W HIF1Q12373 385 aa15.12■□□□□ 0.01
RPN10YHR200W TRK2P28584 889 aa15.11■□□□□ 0.01
RPN10YHR200W IRE1P32361 1115 aa15.11■□□□□ 0.01
RPN10YHR200W MNN4P36044 1178 aa15.11■□□□□ 0.01
RPN10YHR200W SMC2P38989 1170 aaKnown RBP15.11■□□□□ 0.01
RPN10YHR200W DON1Q05610 365 aa15.11■□□□□ 0.01
RPN10YHR200W COQ9Q05779 260 aa15.11■□□□□ 0.01
RPN10YHR200W HMI1Q12039 706 aa15.11■□□□□ 0.01
RPN10YHR200W HFI1Q12060 488 aa15.11■□□□□ 0.01
RPN10YHR200W RRP6Q12149 733 aaKnown RBP15.11■□□□□ 0.01
RPN10YHR200W SNA3P14359 133 aa15.1■□□□□ 0.01
RPN10YHR200W SSD1P24276 1250 aaKnown RBP RIP-Chip data15.1■□□□□ 0.01not detected
RPN10YHR200W EFT1P32324 842 aaKnown RBP15.1■□□□□ 0.01
RPN10YHR200W PXL1P36166 706 aa15.1■□□□□ 0.01
RPN10YHR200W VFA1P40080 203 aa15.1■□□□□ 0.01
RPN10YHR200W SHE10P53075 577 aa15.1■□□□□ 0.01
RPN10YHR200W MLH2Q07980 695 aa15.1■□□□□ 0.01
RPN10YHR200W ATG9Q12142 997 aa15.1■□□□□ 0.01
RPN10YHR200W DED1P06634 604 aaKnown RBP15.09■□□□□ 0.01
RPN10YHR200W AFT1P22149 690 aa15.09■□□□□ 0.01
RPN10YHR200W KTR2P33550 425 aa15.09■□□□□ 0.01
RPN10YHR200W SHM1P37292 490 aaPredicted RBP15.09■□□□□ 0.01
RPN10YHR200W GUA1P38625 525 aaKnown RBP15.09■□□□□ 0.01
RPN10YHR200W RTT102P53330 157 aa15.09■□□□□ 0.01
RPN10YHR200W UTP5Q04177 643 aaKnown RBP15.09■□□□□ 0.01
RPN10YHR200W YPR078CQ06813 372 aa15.09■□□□□ 0.01
RPN10YHR200W CHS2P14180 963 aa15.08■□□□□ 0
RPN10YHR200W UBC1P21734 215 aaKnown RBP15.08■□□□□ 0
RPN10YHR200W NAM7P30771 971 aaKnown RBP15.08■□□□□ 0
RPN10YHR200W RTT107P38850 1070 aa15.08■□□□□ 0
RPN10YHR200W YAP5P40574 245 aa15.08■□□□□ 0
RPN10YHR200W FIG4P42837 879 aa15.08■□□□□ 0
RPN10YHR200W STR2P47164 639 aa15.08■□□□□ 0
RPN10YHR200W ALF1P53904 254 aa15.08■□□□□ 0
RPN10YHR200W VPS38Q05919 439 aa15.08■□□□□ 0
RPN10YHR200W OPY2Q06810 360 aa15.08■□□□□ 0
RPN10YHR200W VMA1P17255 1071 aaKnown RBP15.07■□□□□ 0
RPN10YHR200W SDH2P21801 266 aa15.07■□□□□ 0
RPN10YHR200W YEL1P34225 687 aa15.07■□□□□ 0
RPN10YHR200W UBP5P39944 805 aa15.07■□□□□ 0
RPN10YHR200W PSF2P40359 213 aa15.07■□□□□ 0
RPN10YHR200W HFM1P51979 1187 aa15.07■□□□□ 0
RPN10YHR200W TAM41P53230 385 aa15.07■□□□□ 0
RPN10YHR200W TIM8P57744 87 aa15.07■□□□□ 0
RPN10YHR200W IES4Q08561 116 aa15.07■□□□□ 0
RPN10YHR200W NEW1Q08972 1196 aaKnown RBP15.07■□□□□ 0
RPN10YHR200W CWC2Q12046 339 aaPredicted RBP15.07■□□□□ 0
RPN10YHR200W MAS2P11914 482 aa15.06■□□□□ 0
RPN10YHR200W DPH2P32461 534 aa15.06■□□□□ 0
RPN10YHR200W NIP100P33420 868 aa15.06■□□□□ 0
RPN10YHR200W MNR2P35724 969 aa15.06■□□□□ 0
RPN10YHR200W AVT1P47082 602 aa15.06■□□□□ 0
RPN10YHR200W JJJ3P47138 172 aa15.06■□□□□ 0
RPN10YHR200W APL4Q12028 832 aa15.06■□□□□ 0
RPN10YHR200W YDR461C-AQ2V2P7 80 aa15.06■□□□□ 0
RPN10YHR200W SMY2P32909 740 aaKnown RBP15.05■□□□□ -0
RPN10YHR200W YKL023WP36103 277 aaKnown RBP15.05■□□□□ -0
RPN10YHR200W CAJ1P39101 391 aa15.05■□□□□ -0
RPN10YHR200W OSW7P43611 510 aa15.05■□□□□ -0
RPN10YHR200W JSN1P47135 1091 aaKnown RBP RIP-Chip data15.05■□□□□ -0not detected
RPN10YHR200W CUL3P53202 744 aa15.05■□□□□ -0
RPN10YHR200W ERG5P54781 538 aa15.05■□□□□ -0
RPN10YHR200W VTC3Q02725 835 aa15.05■□□□□ -0
RPN10YHR200W UME1Q03010 460 aa15.05■□□□□ -0
RPN10YHR200W NCR1Q12200 1170 aa15.05■□□□□ -0
RPN10YHR200W SCP160P06105 1222 aaKnown RBP RIP-Chip data15.04■□□□□ -0not detected
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms