RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W RIF1P29539 1916 aa5.59□□□□□ -1.52
MSH1YHR120W DED1P06634 604 aaKnown RBP5.58□□□□□ -1.52
MSH1YHR120W SRD1P09007 221 aa5.58□□□□□ -1.52
MSH1YHR120W LTV1P34078 463 aa5.58□□□□□ -1.52
MSH1YHR120W ROG3P43602 733 aa5.58□□□□□ -1.52
MSH1YHR120W FUS2Q05670 677 aa5.58□□□□□ -1.52
MSH1YHR120W YLH47Q06493 454 aa5.58□□□□□ -1.52
MSH1YHR120W SMC6Q12749 1114 aa5.58□□□□□ -1.52
MSH1YHR120W CAD1P24813 409 aaKnown RBP5.58□□□□□ -1.52
MSH1YHR120W GSY2P27472 705 aa5.58□□□□□ -1.52
MSH1YHR120W URA1P28272 314 aaPredicted RBP5.58□□□□□ -1.52
MSH1YHR120W EFT1P32324 842 aaKnown RBP5.58□□□□□ -1.52
MSH1YHR120W MSS51P32335 436 aa5.58□□□□□ -1.52
MSH1YHR120W YER130CP39959 443 aa5.58□□□□□ -1.52
MSH1YHR120W ULP2P40537 1034 aaPredicted RBP5.58□□□□□ -1.52
MSH1YHR120W UBR2Q07963 1872 aa5.58□□□□□ -1.52
MSH1YHR120W POA1P38218 177 aa5.57□□□□□ -1.52
MSH1YHR120W RTC4P53850 401 aa5.57□□□□□ -1.52
MSH1YHR120W ROD1Q02805 837 aa5.57□□□□□ -1.52
MSH1YHR120W COQ9Q05779 260 aa5.57□□□□□ -1.52
MSH1YHR120W ADY4Q05955 493 aa5.57□□□□□ -1.52
MSH1YHR120W YEL076C-AP0CX16 216 aa5.57□□□□□ -1.52
MSH1YHR120W YLR464WP0CX17 216 aa5.57□□□□□ -1.52
MSH1YHR120W PXL1P36166 706 aa5.57□□□□□ -1.52
MSH1YHR120W GUA1P38625 525 aaKnown RBP5.57□□□□□ -1.52
MSH1YHR120W YEL076CP39971 216 aa5.57□□□□□ -1.52
MSH1YHR120W CBK1P53894 756 aa5.57□□□□□ -1.52
MSH1YHR120W SMC5Q08204 1093 aa5.57□□□□□ -1.52
MSH1YHR120W SFI1Q12369 946 aa5.57□□□□□ -1.52
MSH1YHR120W RGP1P16664 663 aa5.57□□□□□ -1.52
MSH1YHR120W STE11P23561 717 aa5.57□□□□□ -1.52
MSH1YHR120W EAF5P39995 279 aa5.57□□□□□ -1.52
MSH1YHR120W ACF4P47129 309 aa5.57□□□□□ -1.52
MSH1YHR120W YPR117WQ06116 2489 aa5.57□□□□□ -1.52
MSH1YHR120W HXK1P04806 485 aaKnown RBP5.56□□□□□ -1.52
MSH1YHR120W MCM3P24279 971 aaKnown RBP5.56□□□□□ -1.52
MSH1YHR120W FUB1P25659 250 aa5.56□□□□□ -1.52
MSH1YHR120W SIP3P38717 1229 aa5.56□□□□□ -1.52
MSH1YHR120W PIH1P38768 344 aa5.56□□□□□ -1.52
MSH1YHR120W JHD1P40034 492 aa5.56□□□□□ -1.52
MSH1YHR120W FYV10P40492 516 aa5.56□□□□□ -1.52
MSH1YHR120W MMR1Q06324 491 aa5.56□□□□□ -1.52
MSH1YHR120W TCP1P12612 559 aaKnown RBP5.56□□□□□ -1.52
MSH1YHR120W CKA2P19454 339 aa5.56□□□□□ -1.52
MSH1YHR120W THI6P41835 540 aa5.56□□□□□ -1.52
MSH1YHR120W DAK2P43550 591 aa5.56□□□□□ -1.52
MSH1YHR120W UBA2P52488 636 aa5.56□□□□□ -1.52
MSH1YHR120W YGR035CP53222 116 aa5.56□□□□□ -1.52
MSH1YHR120W COG4Q06096 861 aa5.56□□□□□ -1.52
MSH1YHR120W SWI6P09959 803 aa5.55□□□□□ -1.52
MSH1YHR120W MRC1P25588 1096 aa5.55□□□□□ -1.52
MSH1YHR120W PET10P36139 283 aa5.55□□□□□ -1.52
MSH1YHR120W RPN3P40016 523 aaKnown RBP5.55□□□□□ -1.52
MSH1YHR120W RSC8P43609 557 aaKnown RBP5.55□□□□□ -1.52
MSH1YHR120W MUK1Q02866 612 aa5.55□□□□□ -1.52
MSH1YHR120W WAR1Q03631 944 aa5.55□□□□□ -1.52
MSH1YHR120W MNR2P35724 969 aa5.55□□□□□ -1.52
MSH1YHR120W DRE2P36152 348 aa5.55□□□□□ -1.52
MSH1YHR120W AVT1P47082 602 aa5.55□□□□□ -1.52
MSH1YHR120W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
MSH1YHR120W CUE3P53137 624 aaKnown RBP5.55□□□□□ -1.52
MSH1YHR120W NCS2P53923 493 aaPredicted RBP5.55□□□□□ -1.52
MSH1YHR120W NOC3Q07896 663 aaPredicted RBP5.55□□□□□ -1.52
MSH1YHR120W HIF1Q12373 385 aa5.55□□□□□ -1.52
MSH1YHR120W HIS4P00815 799 aaKnown RBP5.54□□□□□ -1.52
MSH1YHR120W ATG19P35193 415 aa5.54□□□□□ -1.52
MSH1YHR120W NUP82P40368 713 aa5.54□□□□□ -1.52
MSH1YHR120W SPO74P45819 413 aa5.54□□□□□ -1.52
MSH1YHR120W VPS60Q03390 229 aa5.54□□□□□ -1.52
MSH1YHR120W HFI1Q12060 488 aa5.54□□□□□ -1.52
MSH1YHR120W PFK1P16861 987 aaKnown RBP5.54□□□□□ -1.52
MSH1YHR120W ISY1P21374 235 aaPredicted RBP5.54□□□□□ -1.52
MSH1YHR120W PGM2P37012 569 aaKnown RBP5.54□□□□□ -1.52
MSH1YHR120W PSY4P38193 441 aa5.54□□□□□ -1.52
MSH1YHR120W JJJ3P47138 172 aa5.54□□□□□ -1.52
MSH1YHR120W GUP1P53154 560 aa5.54□□□□□ -1.52
MSH1YHR120W ARK1P53974 638 aa5.54□□□□□ -1.52
MSH1YHR120W YCG1Q06680 1035 aa5.54□□□□□ -1.52
MSH1YHR120W NOP14Q99207 810 aaKnown RBP5.54□□□□□ -1.52
MSH1YHR120W FOB1O13329 566 aa5.53□□□□□ -1.52
MSH1YHR120W WHI2P12611 486 aa5.53□□□□□ -1.52
MSH1YHR120W PHO13P19881 312 aa5.53□□□□□ -1.52
MSH1YHR120W ERC1P38767 581 aa5.53□□□□□ -1.52
MSH1YHR120W VPS75P53853 264 aa5.53□□□□□ -1.52
MSH1YHR120W YDR034W-BQ6Q5X2 51 aa5.53□□□□□ -1.52
MSH1YHR120W RAM2P29703 316 aa5.53□□□□□ -1.52
MSH1YHR120W TMT1P32643 299 aa5.53□□□□□ -1.52
MSH1YHR120W STR2P47164 639 aa5.53□□□□□ -1.52
MSH1YHR120W MCM6P53091 1017 aaKnown RBP5.53□□□□□ -1.52
MSH1YHR120W TPO2P53283 614 aa5.53□□□□□ -1.52
MSH1YHR120W ALF1P53904 254 aa5.53□□□□□ -1.52
MSH1YHR120W DBP5P20449 482 aaKnown RBP5.53□□□□□ -1.52
MSH1YHR120W BMH1P29311 267 aaKnown RBP5.53□□□□□ -1.52
MSH1YHR120W COT1P32798 439 aa5.53□□□□□ -1.52
MSH1YHR120W GCV2P49095 1034 aa5.53□□□□□ -1.52
MSH1YHR120W CAF130P53280 1122 aaPredicted RBP5.53□□□□□ -1.52
MSH1YHR120W RTT102P53330 157 aa5.53□□□□□ -1.52
MSH1YHR120W MAG2Q06436 670 aaKnown RBP5.53□□□□□ -1.52
MSH1YHR120W IES4Q08561 116 aa5.53□□□□□ -1.52
MSH1YHR120W ADE2P21264 571 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms