RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W YML6P51998 286 aa5.94□□□□□ -1.46
PDE1YGL248W PBP1P53297 722 aaKnown RBP5.94□□□□□ -1.46
PDE1YGL248W VTC3Q02725 835 aa5.94□□□□□ -1.46
PDE1YGL248W NSE5Q03718 556 aa5.94□□□□□ -1.46
PDE1YGL248W MCD1Q12158 566 aa5.94□□□□□ -1.46
PDE1YGL248W STF1P01098 86 aa5.93□□□□□ -1.46
PDE1YGL248W MRP7P12687 371 aa5.93□□□□□ -1.46
PDE1YGL248W APN1P22936 367 aa5.93□□□□□ -1.46
PDE1YGL248W PGS1P25578 521 aa5.93□□□□□ -1.46
PDE1YGL248W TFC4P33339 1025 aa5.93□□□□□ -1.46
PDE1YGL248W TED1P40533 473 aa5.93□□□□□ -1.46
PDE1YGL248W OCA1P50946 238 aaPredicted RBP5.93□□□□□ -1.46
PDE1YGL248W TAN1P53072 289 aaPredicted RBP5.93□□□□□ -1.46
PDE1YGL248W ERP6P53198 216 aa5.93□□□□□ -1.46
PDE1YGL248W YNL011CP53980 444 aa5.93□□□□□ -1.46
PDE1YGL248W CDC55Q00362 526 aa5.93□□□□□ -1.46
PDE1YGL248W VPS30Q02948 557 aa5.93□□□□□ -1.46
PDE1YGL248W CWC21Q03375 135 aaKnown RBP5.93□□□□□ -1.46
PDE1YGL248W SPO71Q03868 1245 aa5.93□□□□□ -1.46
PDE1YGL248W SGD1Q06132 899 aa5.93□□□□□ -1.46
PDE1YGL248W YLH47Q06493 454 aa5.93□□□□□ -1.46
PDE1YGL248W SCM3Q12334 223 aa5.93□□□□□ -1.46
PDE1YGL248W CHD1P32657 1468 aa5.92□□□□□ -1.46
PDE1YGL248W FUR1P18562 216 aaKnown RBP5.92□□□□□ -1.46
PDE1YGL248W NIP100P33420 868 aa5.92□□□□□ -1.46
PDE1YGL248W YHL041WP38730 149 aa5.92□□□□□ -1.46
PDE1YGL248W BCD1P38772 366 aa5.92□□□□□ -1.46
PDE1YGL248W BFR1P38934 470 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
PDE1YGL248W JEM1P40358 645 aa5.92□□□□□ -1.46
PDE1YGL248W SDA1P53313 767 aaKnown RBP5.92□□□□□ -1.46
PDE1YGL248W PTA1Q01329 785 aaPredicted RBP5.92□□□□□ -1.46
PDE1YGL248W SDH5Q08230 162 aa5.92□□□□□ -1.46
PDE1YGL248W SES1P07284 462 aaKnown RBP5.91□□□□□ -1.46
PDE1YGL248W GLK1P17709 500 aaKnown RBP5.91□□□□□ -1.46
PDE1YGL248W BAS1P22035 811 aa5.91□□□□□ -1.46
PDE1YGL248W KCC4P25389 1037 aa5.91□□□□□ -1.46
PDE1YGL248W ARE1P25628 610 aa5.91□□□□□ -1.46
PDE1YGL248W RSC6P25632 483 aa5.91□□□□□ -1.46
PDE1YGL248W ISC10P32645 267 aa5.91□□□□□ -1.46
PDE1YGL248W TYS1P36421 394 aaKnown RBP5.91□□□□□ -1.46
PDE1YGL248W SRP72P38688 640 aaKnown RBP5.91□□□□□ -1.46
PDE1YGL248W LRP1P38801 184 aaKnown RBP5.91□□□□□ -1.46
PDE1YGL248W GIP2P40036 548 aa5.91□□□□□ -1.46
PDE1YGL248W HXT8P40886 569 aa5.91□□□□□ -1.46
PDE1YGL248W HSV2P50079 448 aaPredicted RBP5.91□□□□□ -1.46
PDE1YGL248W SHE10P53075 577 aa5.91□□□□□ -1.46
PDE1YGL248W SNP1Q00916 300 aaPredicted RBP5.91□□□□□ -1.46
PDE1YGL248W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
PDE1YGL248W RSC4Q02206 625 aa5.91□□□□□ -1.46
PDE1YGL248W YLR287CQ05881 355 aa5.91□□□□□ -1.46
PDE1YGL248W EAF1Q06337 982 aa5.91□□□□□ -1.46
PDE1YGL248W RSC58Q07979 502 aa5.91□□□□□ -1.46
PDE1YGL248W FMP25Q08023 583 aa5.91□□□□□ -1.46
PDE1YGL248W APC11Q12157 165 aa5.91□□□□□ -1.46
PDE1YGL248W SPO21Q12411 609 aa5.91□□□□□ -1.46
PDE1YGL248W SMC6Q12749 1114 aa5.91□□□□□ -1.46
PDE1YGL248W PRE9P23638 258 aaKnown RBP5.9□□□□□ -1.46
PDE1YGL248W RER1P25560 188 aa5.9□□□□□ -1.46
PDE1YGL248W KAE1P36132 386 aa5.9□□□□□ -1.46
PDE1YGL248W BAP2P38084 609 aa5.9□□□□□ -1.46
PDE1YGL248W ACA1P39970 489 aa5.9□□□□□ -1.46
PDE1YGL248W SAE2P46946 345 aa5.9□□□□□ -1.46
PDE1YGL248W YJL181WP46987 611 aa5.9□□□□□ -1.46
PDE1YGL248W PPT1P53043 513 aa5.9□□□□□ -1.46
PDE1YGL248W SOK2P53438 785 aaPredicted RBP5.9□□□□□ -1.46
PDE1YGL248W RNH1Q04740 348 aa5.9□□□□□ -1.46
PDE1YGL248W NOC3Q07896 663 aaPredicted RBP5.9□□□□□ -1.46
PDE1YGL248W CMP2P14747 604 aa5.89□□□□□ -1.47
PDE1YGL248W APA1P16550 321 aaKnown RBP5.89□□□□□ -1.47
PDE1YGL248W SPO16P17122 198 aa5.89□□□□□ -1.47
PDE1YGL248W PHO81P17442 1178 aa5.89□□□□□ -1.47
PDE1YGL248W DUT1P33317 147 aa5.89□□□□□ -1.47
PDE1YGL248W ESL2P36168 1195 aa5.89□□□□□ -1.47
PDE1YGL248W KTR4P38131 464 aa5.89□□□□□ -1.47
PDE1YGL248W FAA3P39002 694 aa5.89□□□□□ -1.47
PDE1YGL248W GPP2P40106 250 aaKnown RBP5.89□□□□□ -1.47
PDE1YGL248W IRR1P40541 1150 aa5.89□□□□□ -1.47
PDE1YGL248W HIS6P40545 261 aa5.89□□□□□ -1.47
PDE1YGL248W RSC8P43609 557 aaKnown RBP5.89□□□□□ -1.47
PDE1YGL248W RET2P43621 546 aa5.89□□□□□ -1.47
PDE1YGL248W TIM50Q02776 476 aa5.89□□□□□ -1.47
PDE1YGL248W RAD33Q04231 177 aa5.89□□□□□ -1.47
PDE1YGL248W SWA2Q06677 668 aa5.89□□□□□ -1.47
PDE1YGL248W ADY3Q07732 790 aa5.89□□□□□ -1.47
PDE1YGL248W ESC8Q08119 714 aa5.89□□□□□ -1.47
PDE1YGL248W AVO1Q08236 1176 aa5.89□□□□□ -1.47
PDE1YGL248W RTT10Q08924 1013 aa5.89□□□□□ -1.47
PDE1YGL248W INO80P53115 1489 aa5.89□□□□□ -1.47
PDE1YGL248W VMA2P16140 517 aaKnown RBP5.88□□□□□ -1.47
PDE1YGL248W MRP8P35719 219 aa5.88□□□□□ -1.47
PDE1YGL248W GDH3P39708 457 aa5.88□□□□□ -1.47
PDE1YGL248W TIF4631P39935 952 aaKnown RBP5.88□□□□□ -1.47
PDE1YGL248W YIL165CP40446 119 aa5.88□□□□□ -1.47
PDE1YGL248W RTA1P53047 317 aa5.88□□□□□ -1.47
PDE1YGL248W ZDS2P54786 942 aa5.88□□□□□ -1.47
PDE1YGL248W TAF8Q03750 510 aa5.88□□□□□ -1.47
PDE1YGL248W TOS4Q06266 489 aa5.88□□□□□ -1.47
PDE1YGL248W GIC2Q06648 383 aa5.88□□□□□ -1.47
PDE1YGL248W MED7Q08278 222 aa5.88□□□□□ -1.47
PDE1YGL248W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms