RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W MED8P38304 223 aa5.91□□□□□ -1.46
UBP9YER098W ALG2P43636 503 aa5.91□□□□□ -1.46
UBP9YER098W GUS1P46655 708 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
UBP9YER098W UTP22P53254 1237 aaPredicted RBP5.91□□□□□ -1.46
UBP9YER098W BMS1Q08965 1183 aaKnown RBP5.91□□□□□ -1.46
UBP9YER098W TY2B-BQ12491 1770 aa5.91□□□□□ -1.46
UBP9YER098W RAD18P10862 487 aa5.91□□□□□ -1.46
UBP9YER098W TAF5P38129 798 aa5.91□□□□□ -1.46
UBP9YER098W SIC1P38634 284 aa5.91□□□□□ -1.46
UBP9YER098W ECM1P39715 212 aa5.91□□□□□ -1.46
UBP9YER098W IES5P40060 125 aa5.91□□□□□ -1.46
UBP9YER098W MRP10O75012 95 aa5.9□□□□□ -1.46
UBP9YER098W DPS1P04802 557 aaKnown RBP5.9□□□□□ -1.46
UBP9YER098W LTV1P34078 463 aa5.9□□□□□ -1.46
UBP9YER098W ATG14P38270 344 aa5.9□□□□□ -1.46
UBP9YER098W LSC2P53312 427 aa5.9□□□□□ -1.46
UBP9YER098W HOS3Q02959 697 aaKnown RBP5.9□□□□□ -1.46
UBP9YER098W SPO71Q03868 1245 aa5.9□□□□□ -1.46
UBP9YER098W DEP1P31385 405 aa5.9□□□□□ -1.47
UBP9YER098W PPH3P32345 308 aa5.9□□□□□ -1.47
UBP9YER098W MET13P53128 600 aa5.9□□□□□ -1.47
UBP9YER098W RKM2Q03942 479 aa5.9□□□□□ -1.47
UBP9YER098W DUS3Q06053 668 aaKnown RBP5.9□□□□□ -1.47
UBP9YER098W YIG1Q08956 461 aa5.9□□□□□ -1.47
UBP9YER098W GNT1Q12096 491 aa5.9□□□□□ -1.47
UBP9YER098W TCB1Q12466 1186 aa5.9□□□□□ -1.47
UBP9YER098W TY3B-IQ7LHG5 1498 aaKnown RBP5.89□□□□□ -1.47
UBP9YER098W PCL2P25693 308 aa5.89□□□□□ -1.47
UBP9YER098W RKM3P38222 552 aa5.89□□□□□ -1.47
UBP9YER098W CIN4P39110 191 aa5.89□□□□□ -1.47
UBP9YER098W MTC5Q03897 1148 aa5.89□□□□□ -1.47
UBP9YER098W SOG2Q08817 791 aa5.89□□□□□ -1.47
UBP9YER098W RPP1AP05318 106 aaPredicted RBP5.88□□□□□ -1.47
UBP9YER098W TRK1P12685 1235 aa5.88□□□□□ -1.47
UBP9YER098W RGD1P38339 666 aa5.88□□□□□ -1.47
UBP9YER098W SIT1P39980 628 aa5.88□□□□□ -1.47
UBP9YER098W NEO1P40527 1151 aa5.88□□□□□ -1.47
UBP9YER098W UBX4P54730 416 aa5.88□□□□□ -1.47
UBP9YER098W PRP3Q03338 469 aaPredicted RBP5.88□□□□□ -1.47
UBP9YER098W HAS1Q03532 505 aaKnown RBP5.88□□□□□ -1.47
UBP9YER098W COG4Q06096 861 aa5.88□□□□□ -1.47
UBP9YER098W SPP382Q06411 708 aaPredicted RBP5.88□□□□□ -1.47
UBP9YER098W ARO1P08566 1588 aaKnown RBP5.88□□□□□ -1.47
UBP9YER098W DNF2Q12675 1612 aa5.88□□□□□ -1.47
UBP9YER098W PGI1P12709 554 aaKnown RBP5.88□□□□□ -1.47
UBP9YER098W SPC29P33419 253 aa5.88□□□□□ -1.47
UBP9YER098W MTC2P34246 357 aa5.88□□□□□ -1.47
UBP9YER098W YKL222CP35995 705 aa5.88□□□□□ -1.47
UBP9YER098W ERT1P38140 529 aa5.88□□□□□ -1.47
UBP9YER098W SPO74P45819 413 aa5.88□□□□□ -1.47
UBP9YER098W NUP85P46673 744 aa5.88□□□□□ -1.47
UBP9YER098W HEH2Q03281 663 aa5.88□□□□□ -1.47
UBP9YER098W VPS60Q03390 229 aa5.88□□□□□ -1.47
UBP9YER098W PTC5Q12511 572 aa5.88□□□□□ -1.47
UBP9YER098W SFL1P20134 766 aa5.87□□□□□ -1.47
UBP9YER098W PRP19P32523 503 aaKnown RBP5.87□□□□□ -1.47
UBP9YER098W TCD1P38756 429 aa5.87□□□□□ -1.47
UBP9YER098W YJR096WP47137 282 aa5.87□□□□□ -1.47
UBP9YER098W COG8Q04632 607 aa5.87□□□□□ -1.47
UBP9YER098W RPN7Q06103 429 aaKnown RBP5.87□□□□□ -1.47
UBP9YER098W MIC60P36112 540 aa5.87□□□□□ -1.47
UBP9YER098W PIP2P52960 996 aa5.87□□□□□ -1.47
UBP9YER098W MET14Q02196 202 aa5.87□□□□□ -1.47
UBP9YER098W LCB5Q06147 687 aaKnown RBP5.87□□□□□ -1.47
UBP9YER098W SFI1Q12369 946 aa5.87□□□□□ -1.47
UBP9YER098W MFT1P33441 392 aaKnown RBP5.86□□□□□ -1.47
UBP9YER098W MSC7P38694 644 aa5.86□□□□□ -1.47
UBP9YER098W BRE1Q07457 700 aaKnown RBP5.86□□□□□ -1.47
UBP9YER098W CDC19P00549 500 aaKnown RBP5.86□□□□□ -1.47
UBP9YER098W YRO2P38079 344 aa5.86□□□□□ -1.47
UBP9YER098W SPC105P53148 917 aa5.86□□□□□ -1.47
UBP9YER098W AIM21P40563 679 aa5.85□□□□□ -1.47
UBP9YER098W PAP2P53632 584 aaKnown RBP5.85□□□□□ -1.47
UBP9YER098W BUL2Q03758 920 aaKnown RBP5.85□□□□□ -1.47
UBP9YER098W ETT1Q08421 412 aaKnown RBP5.85□□□□□ -1.47
UBP9YER098W MLP1Q02455 1875 aaKnown RBP5.85□□□□□ -1.47
UBP9YER098W GAL1P04385 528 aa5.85□□□□□ -1.47
UBP9YER098W HSP78P33416 811 aa5.85□□□□□ -1.47
UBP9YER098W MPE1P35728 441 aaKnown RBP5.85□□□□□ -1.47
UBP9YER098W TRZ1P36159 838 aaPredicted RBP5.85□□□□□ -1.47
UBP9YER098W YIL092WP40497 633 aa5.85□□□□□ -1.47
UBP9YER098W GYP8P43570 497 aa5.85□□□□□ -1.47
UBP9YER098W ADE8P04161 214 aa5.84□□□□□ -1.47
UBP9YER098W YER152CP10356 443 aa5.84□□□□□ -1.47
UBP9YER098W RET1P22276 1149 aaKnown RBP5.84□□□□□ -1.47
UBP9YER098W DBP2P24783 546 aaKnown RBP5.84□□□□□ -1.47
UBP9YER098W SCT1P32784 759 aa5.84□□□□□ -1.47
UBP9YER098W AFR1P33304 620 aa5.84□□□□□ -1.47
UBP9YER098W YEL1P34225 687 aa5.84□□□□□ -1.47
UBP9YER098W PNT1P38969 423 aa5.84□□□□□ -1.47
UBP9YER098W VID27P40157 782 aa5.84□□□□□ -1.47
UBP9YER098W MDS3P53094 1487 aa5.84□□□□□ -1.47
UBP9YER098W RAS1P01119 309 aa5.83□□□□□ -1.48
UBP9YER098W OAF1P39720 1047 aaPredicted RBP5.83□□□□□ -1.48
UBP9YER098W TOK1P40310 691 aa5.83□□□□□ -1.48
UBP9YER098W PRK1P40494 810 aa5.83□□□□□ -1.48
UBP9YER098W TY4A-JP47023 414 aa5.83□□□□□ -1.48
UBP9YER098W PIL1P53252 339 aaKnown RBP5.83□□□□□ -1.48
UBP9YER098W RNT1Q02555 471 aa5.83□□□□□ -1.48
UBP9YER098W GUD1Q07729 489 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms