RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C PHR1P05066 565 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
ATG20YDL113C FBP1P09201 348 aa5.73□□□□□ -1.49
ATG20YDL113C SAM1P10659 382 aaKnown RBP5.73□□□□□ -1.49
ATG20YDL113C PNT1P38969 423 aa5.73□□□□□ -1.49
ATG20YDL113C SEC9P40357 651 aa5.73□□□□□ -1.49
ATG20YDL113C ROM1P53046 1155 aa5.73□□□□□ -1.49
ATG20YDL113C ORC4P54791 529 aa5.73□□□□□ -1.49
ATG20YDL113C UME1Q03010 460 aa5.73□□□□□ -1.49
ATG20YDL113C BUL2Q03758 920 aaKnown RBP5.73□□□□□ -1.49
ATG20YDL113C CIT2P08679 460 aa5.72□□□□□ -1.49
ATG20YDL113C ISW1P38144 1129 aa5.72□□□□□ -1.49
ATG20YDL113C PHO88P38264 188 aaPredicted RBP5.72□□□□□ -1.49
ATG20YDL113C SIP3P38717 1229 aa5.72□□□□□ -1.49
ATG20YDL113C PES4P39684 611 aa5.72□□□□□ -1.49
ATG20YDL113C VAC8P39968 578 aa5.72□□□□□ -1.49
ATG20YDL113C ATG3P40344 310 aa5.72□□□□□ -1.49
ATG20YDL113C BRE2P43132 505 aa5.72□□□□□ -1.49
ATG20YDL113C TOS3P43637 560 aa5.72□□□□□ -1.49
ATG20YDL113C YGL039WP53183 348 aaKnown RBP5.72□□□□□ -1.49
ATG20YDL113C YML037CQ03703 340 aa5.72□□□□□ -1.49
ATG20YDL113C YLR287CQ05881 355 aa5.72□□□□□ -1.49
ATG20YDL113C UBX5Q06682 500 aa5.72□□□□□ -1.49
ATG20YDL113C NOP58Q12499 511 aaKnown RBP5.72□□□□□ -1.49
ATG20YDL113C RPS9BP05755 195 aaKnown RBP5.72□□□□□ -1.49
ATG20YDL113C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
ATG20YDL113C RAD18P10862 487 aa5.72□□□□□ -1.49
ATG20YDL113C PFK1P16861 987 aaKnown RBP5.72□□□□□ -1.49
ATG20YDL113C SPO12P17123 173 aa5.72□□□□□ -1.49
ATG20YDL113C DAL7P21826 554 aa5.72□□□□□ -1.49
ATG20YDL113C SRO9P25567 434 aaKnown RBP5.72□□□□□ -1.49
ATG20YDL113C SHP1P34223 423 aa5.72□□□□□ -1.49
ATG20YDL113C PXL1P36166 706 aa5.72□□□□□ -1.49
ATG20YDL113C APT1P49435 187 aaKnown RBP5.72□□□□□ -1.49
ATG20YDL113C HFM1P51979 1187 aa5.72□□□□□ -1.49
ATG20YDL113C YNL115CP53925 644 aa5.72□□□□□ -1.49
ATG20YDL113C MFM1Q02783 413 aa5.72□□□□□ -1.49
ATG20YDL113C TMA64Q04600 565 aaKnown RBP5.72□□□□□ -1.49
ATG20YDL113C SFI1Q12369 946 aa5.72□□□□□ -1.49
ATG20YDL113C CSR2Q12734 1121 aa5.72□□□□□ -1.49
ATG20YDL113C YLR278CQ05854 1341 aa5.71□□□□□ -1.5
ATG20YDL113C PHO87P25360 923 aa5.71□□□□□ -1.5
ATG20YDL113C STO1P34160 861 aaKnown RBP5.71□□□□□ -1.5
ATG20YDL113C MGE1P38523 228 aa5.71□□□□□ -1.5
ATG20YDL113C QDR1P40475 563 aa5.71□□□□□ -1.5
ATG20YDL113C ACS2P52910 683 aaKnown RBP5.71□□□□□ -1.5
ATG20YDL113C CAF130P53280 1122 aaPredicted RBP5.71□□□□□ -1.5
ATG20YDL113C SOL4P53315 255 aa5.71□□□□□ -1.5
ATG20YDL113C VPS38Q05919 439 aa5.71□□□□□ -1.5
ATG20YDL113C YDL057WQ07379 328 aa5.71□□□□□ -1.5
ATG20YDL113C CKA2P19454 339 aa5.7□□□□□ -1.5
ATG20YDL113C SPO11P23179 398 aa5.7□□□□□ -1.5
ATG20YDL113C TRK2P28584 889 aa5.7□□□□□ -1.5
ATG20YDL113C SPC110P32380 944 aa5.7□□□□□ -1.5
ATG20YDL113C ACF4P47129 309 aa5.7□□□□□ -1.5
ATG20YDL113C COG4Q06096 861 aa5.7□□□□□ -1.5
ATG20YDL113C YLR001CQ07895 862 aa5.7□□□□□ -1.5
ATG20YDL113C HMI1Q12039 706 aa5.7□□□□□ -1.5
ATG20YDL113C NCR1Q12200 1170 aa5.7□□□□□ -1.5
ATG20YDL113C MTF2P10849 440 aa5.7□□□□□ -1.5
ATG20YDL113C PDC6P26263 563 aaKnown RBP5.7□□□□□ -1.5
ATG20YDL113C UGA4P32837 571 aa5.7□□□□□ -1.5
ATG20YDL113C PPG1P32838 368 aa5.7□□□□□ -1.5
ATG20YDL113C XRS2P33301 854 aa5.7□□□□□ -1.5
ATG20YDL113C UBP11P36026 717 aa5.7□□□□□ -1.5
ATG20YDL113C CAJ1P39101 391 aa5.7□□□□□ -1.5
ATG20YDL113C VFA1P40080 203 aa5.7□□□□□ -1.5
ATG20YDL113C IES1P43579 692 aa5.7□□□□□ -1.5
ATG20YDL113C DAN4P47179 1161 aa5.7□□□□□ -1.5
ATG20YDL113C PRP31P49704 494 aaPredicted RBP5.7□□□□□ -1.5
ATG20YDL113C NBP1P52919 319 aaPredicted RBP5.7□□□□□ -1.5
ATG20YDL113C LIF1P53150 421 aa5.7□□□□□ -1.5
ATG20YDL113C TOF1P53840 1238 aa5.7□□□□□ -1.5
ATG20YDL113C ALD6P54115 500 aaKnown RBP5.7□□□□□ -1.5
ATG20YDL113C WHI4Q07655 649 aaKnown RBP5.7□□□□□ -1.5
ATG20YDL113C UBC1P21734 215 aaKnown RBP5.69□□□□□ -1.5
ATG20YDL113C RPC53P25441 422 aa5.69□□□□□ -1.5
ATG20YDL113C YEL1P34225 687 aa5.69□□□□□ -1.5
ATG20YDL113C CAB3P36076 571 aa5.69□□□□□ -1.5
ATG20YDL113C UBP5P39944 805 aa5.69□□□□□ -1.5
ATG20YDL113C SHQ1P40486 507 aaPredicted RBP5.69□□□□□ -1.5
ATG20YDL113C HUL4P40985 892 aa5.69□□□□□ -1.5
ATG20YDL113C ALG12P53730 551 aa5.69□□□□□ -1.5
ATG20YDL113C ERG5P54781 538 aa5.69□□□□□ -1.5
ATG20YDL113C DUS3Q06053 668 aaKnown RBP5.69□□□□□ -1.5
ATG20YDL113C GIN4Q12263 1142 aa5.69□□□□□ -1.5
ATG20YDL113C PPR1P07272 904 aaPredicted RBP5.68□□□□□ -1.5
ATG20YDL113C RPP1BP10622 106 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C CLN3P13365 580 aa5.68□□□□□ -1.5
ATG20YDL113C TGL1P34163 548 aa5.68□□□□□ -1.5
ATG20YDL113C TOM20P35180 183 aa5.68□□□□□ -1.5
ATG20YDL113C PGM2P37012 569 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C EFM2P38347 419 aa5.68□□□□□ -1.5
ATG20YDL113C CEP3P40969 608 aa5.68□□□□□ -1.5
ATG20YDL113C YFL034WP43564 1073 aa5.68□□□□□ -1.5
ATG20YDL113C VPS60Q03390 229 aa5.68□□□□□ -1.5
ATG20YDL113C RRB1Q04225 511 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C FUR4P05316 633 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C TOM70P07213 617 aaKnown RBP5.68□□□□□ -1.5
ATG20YDL113C HAP4P14064 554 aa5.68□□□□□ -1.5
ATG20YDL113C TUP1P16649 713 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms