RNA–Protein interactions for RNA: YBR041W

FAT1, Transcript of Very long chain fatty acyl-CoA synthetase and fatty acid transporter, yeast

Gene FAT1, Length 2,010 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAT1	YBR041W	UTP13	Q05946	817 aa	Known RBP	4.11	□□□□□ -1.75
FAT1	YBR041W	WHI4	Q07655	649 aa	Known RBP	4.11	□□□□□ -1.75
FAT1	YBR041W	YPL216W	Q08964	1102 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	FAL1	Q12099	399 aa	Known RBP	4.11	□□□□□ -1.75
FAT1	YBR041W	MED1	Q12321	566 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	TUB2	P02557	457 aa	Known RBP	4.11	□□□□□ -1.75
FAT1	YBR041W	PCK1	P10963	549 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	PFK1	P16861	987 aa	Known RBP	4.11	□□□□□ -1.75
FAT1	YBR041W	YBL028C	P38202	106 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	RCK2	P38623	610 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	VPS41	P38959	992 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	YER156C	P40093	338 aa	Known RBP	4.11	□□□□□ -1.75
FAT1	YBR041W	MAD1	P40957	749 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	GPD2	P41911	440 aa	Known RBP	4.11	□□□□□ -1.75
FAT1	YBR041W	MIC19	P43594	170 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	VID30	P53076	958 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	ENV11	P53246	860 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	RTS3	P53289	263 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	YGR273C	P53329	174 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	GYL1	Q04322	720 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	VTI1	Q04338	217 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	UTP4	Q06679	776 aa	Known RBP	4.11	□□□□□ -1.75
FAT1	YBR041W	YPR078C	Q06813	372 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	YPL277C	Q08989	487 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	YOL087C	Q99247	1116 aa		4.11	□□□□□ -1.75
FAT1	YBR041W	ILV1	P00927	576 aa	Known RBP	4.1	□□□□□ -1.75
FAT1	YBR041W	PMA1	P05030	918 aa	Known RBP	4.1	□□□□□ -1.75
FAT1	YBR041W	TRK2	P28584	889 aa		4.1	□□□□□ -1.75
FAT1	YBR041W	PPS1	P38148	807 aa		4.1	□□□□□ -1.75
FAT1	YBR041W	PIH1	P38768	344 aa		4.1	□□□□□ -1.75
FAT1	YBR041W	NDT80	P38830	627 aa		4.1	□□□□□ -1.75
FAT1	YBR041W	HXT8	P40886	569 aa		4.1	□□□□□ -1.75
FAT1	YBR041W	YGR021W	P53212	290 aa		4.1	□□□□□ -1.75
FAT1	YBR041W	PGA2	P53903	129 aa		4.1	□□□□□ -1.75
FAT1	YBR041W	ALD6	P54115	500 aa	Known RBP	4.1	□□□□□ -1.75
FAT1	YBR041W	GUD1	Q07729	489 aa		4.1	□□□□□ -1.75
FAT1	YBR041W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
FAT1	YBR041W	ERG11	P10614	530 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	STV1	P37296	890 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	ORC6	P38826	435 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	RAD26	P40352	1085 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	MMM1	P41800	426 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	YFL034W	P43564	1073 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	FMS1	P50264	508 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	YGR130C	P53278	816 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	CNM67	P53865	581 aa	Known RBP	4.09	□□□□□ -1.75
FAT1	YBR041W	ESBP6	P53918	673 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	SYH1	Q02875	849 aa	Known RBP	4.09	□□□□□ -1.75
FAT1	YBR041W	YLH47	Q06493	454 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	RLP24	Q07915	199 aa	Known RBP	4.09	□□□□□ -1.75
FAT1	YBR041W	RIO1	Q12196	484 aa	Known RBP	4.09	□□□□□ -1.75
FAT1	YBR041W	ARP6	Q12509	438 aa		4.09	□□□□□ -1.75
FAT1	YBR041W	ERG12	P07277	443 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	SRD1	P09007	221 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	PWP2	P25635	923 aa	Known RBP	4.09	□□□□□ -1.76
FAT1	YBR041W	SUV3	P32580	737 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	UBP11	P36026	717 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	PGM2	P37012	569 aa	Known RBP	4.09	□□□□□ -1.76
FAT1	YBR041W	PTC4	P38089	393 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	PHO88	P38264	188 aa	Predicted RBP	4.09	□□□□□ -1.76
FAT1	YBR041W	RGD1	P38339	666 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	VHR2	P40041	505 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	PXA1	P41909	870 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	TOF1	P53840	1238 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	RNT1	Q02555	471 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	YLR297W	Q05899	129 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	YLR326W	Q06170	240 aa	Known RBP	4.09	□□□□□ -1.76
FAT1	YBR041W	CSR1	Q06705	408 aa	Known RBP	4.09	□□□□□ -1.76
FAT1	YBR041W	TSR1	Q07381	788 aa	Known RBP	4.09	□□□□□ -1.76
FAT1	YBR041W	ATG20	Q07528	640 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	YLR001C	Q07895	862 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	LAP2	Q10740	671 aa		4.09	□□□□□ -1.76
FAT1	YBR041W	PGK1	P00560	416 aa	Known RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	CDC8	P00572	216 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	TRP2	P00899	507 aa	Known RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	PHO8	P11491	566 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	TCP1	P12612	559 aa	Known RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	GFA1	P14742	717 aa	Known RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	DAL7	P21826	554 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	MRF1	P30775	413 aa	Predicted RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	DEP1	P31385	405 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	ECM32	P32644	1121 aa	Known RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	PGM1	P33401	570 aa	Known RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	TGL1	P34163	548 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	MMS21	P38632	267 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	VPS29	P38759	282 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	FIS1	P40515	155 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	LCB2	P40970	561 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	YJR079W	P47126	109 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	SGM1	P47166	707 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	COS5	P47187	383 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	KAP114	P53067	1004 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	YGL140C	P53120	1219 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	CWC22	P53333	577 aa	Known RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	ARK1	P53974	638 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	SUB1	P54000	292 aa	Known RBP	4.08	□□□□□ -1.76
FAT1	YBR041W	EEB1	Q02891	456 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	PHM6	Q05637	104 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	ECI1	Q05871	280 aa		4.08	□□□□□ -1.76
FAT1	YBR041W	STE23	Q06010	1027 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms