RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	ATP22	P50273	684 aa	Predicted RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	EFM5	P53200	248 aa	Known RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	ZDS2	P54786	942 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	RPN4	Q03465	531 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	GIS4	Q04233	774 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	HDA3	Q06623	655 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	VIP1	Q06685	1146 aa	Known RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	RTC5	Q12108	567 aa	Known RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	WHI5	Q12416	295 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	RRP36	Q12481	300 aa	Predicted RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	REV3	P14284	1504 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	CFT1	Q06632	1357 aa	Known RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	CDC60	P26637	1090 aa	Known RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	YKL091C	P33324	310 aa	Known RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	TGL4	P36165	910 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	CCL1	P37366	393 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	UBP13	P38187	747 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	SHC1	P39000	512 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	CCT3	P39077	534 aa	Known RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	RIC1	P40395	1056 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	MET18	P40469	1032 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	HOL1	P53389	586 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.82	□□□□□ -1.96	not detected
YDR239C	YDR239C	NNT1	Q05874	261 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	NOC3	Q07896	663 aa	Predicted RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	RIO1	Q12196	484 aa	Known RBP	2.82	□□□□□ -1.96
YDR239C	YDR239C	YGR161W-C	Q3E744	92 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	SWI1	P09547	1314 aa		2.82	□□□□□ -1.96
YDR239C	YDR239C	HEM1	P09950	548 aa	Predicted RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	APL2	P36000	726 aa	Predicted RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	NCL1	P38205	684 aa	Known RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	SOH1	P38633	127 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	ERC1	P38767	581 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	CIC1	P38779	376 aa	Known RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	FMP10	P40098	244 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	VID27	P40157	782 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	NDC80	P40460	691 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	SEC26	P41810	973 aa	Known RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	YJR142W	P47173	342 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	SHE10	P53075	577 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	UTP22	P53254	1237 aa	Predicted RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	LSC1	P53598	329 aa	Known RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.81	□□□□□ -1.96	not detected
YDR239C	YDR239C	SPO19	Q03029	223 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	ATG16	Q03818	150 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	ECM11	Q04110	302 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	YML083C	Q04526	418 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	YLH47	Q06493	454 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	SLP1	Q12232	587 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	YIL002W-A	Q3E7Z5	69 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	RPS31	P05759	152 aa	Known RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	RPB2	P08518	1224 aa	Known RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	SEN2	P16658	377 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	NAR1	P23503	491 aa	Known RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	URA1	P28272	314 aa	Predicted RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	SLX1	P38324	304 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	SAF1	P38352	637 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	STN1	P38960	494 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	POP2	P39008	433 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	SIT1	P39980	628 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	TMN3	P40071	706 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	PRK1	P40494	810 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	MPH1	P40562	993 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	DAK2	P43550	591 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	SAP155	P43612	1002 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	APL6	P46682	809 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	GIS1	Q03833	894 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	UTP13	Q05946	817 aa	Known RBP	2.81	□□□□□ -1.96
YDR239C	YDR239C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.81	□□□□□ -1.96	not detected
YDR239C	YDR239C	HAT1	Q12341	374 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	SEC39	Q12745	709 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	RTP1	Q12751	981 aa		2.81	□□□□□ -1.96
YDR239C	YDR239C	GAL1	P04385	528 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	MPH2	P0CD99	609 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	TPM1	P17536	199 aa	Known RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	PAP1	P29468	568 aa	Known RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	RME1	P32338	300 aa	Known RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	NUF2	P33895	451 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	YKL100C	P34248	587 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	MRPL40	P36534	297 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	RIM11	P38615	370 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	YHR020W	P38708	688 aa	Known RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	HAL5	P38970	855 aa	Known RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	SPC72	P39723	622 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	KTR7	P40504	517 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	YGR021W	P53212	290 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	SPO1	P53541	631 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	IST1	P53843	298 aa	Predicted RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	ADE13	Q05911	482 aa	Known RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	GIC2	Q06648	383 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	YDL073W	Q07454	984 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	DNL4	Q08387	944 aa	Predicted RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	YPL191C	Q08930	360 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	YBL111C	Q3E7Y5	667 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	RAD50	P12753	1312 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	PEP1	P32319	1579 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	ECM32	P32644	1121 aa	Known RBP	2.8	□□□□□ -1.96
YDR239C	YDR239C	SEC8	P32855	1065 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	PEX6	P33760	1030 aa		2.8	□□□□□ -1.96
YDR239C	YDR239C	STO1	P34160	861 aa	Known RBP	2.8	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms