RNA–Protein interactions for RNA: YCR068W

ATG15, Transcript of Lipase required for intravacuolar lysis of autophagic and Cvt bodies, yeast

Gene ATG15, Length 1,563 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG15	YCR068W	ZPR1	P53303	486 aa	Known RBP	10.9	□□□□□ -0.67
ATG15	YCR068W	DIP5	P53388	608 aa		10.9	□□□□□ -0.67
ATG15	YCR068W	TLG2	Q08144	397 aa		10.9	□□□□□ -0.67
ATG15	YCR068W	SUP45	P12385	437 aa	Known RBP	10.89	□□□□□ -0.67
ATG15	YCR068W	PFK1	P16861	987 aa	Known RBP	10.89	□□□□□ -0.67
ATG15	YCR068W	RAM2	P29703	316 aa		10.89	□□□□□ -0.67
ATG15	YCR068W	REG2	P38232	338 aa		10.89	□□□□□ -0.67
ATG15	YCR068W	DUS4	Q06063	367 aa		10.89	□□□□□ -0.67
ATG15	YCR068W	HMF1	P40037	129 aa	Known RBP	10.88	□□□□□ -0.67
ATG15	YCR068W	FIS1	P40515	155 aa		10.88	□□□□□ -0.67
ATG15	YCR068W	AIP1	P46680	615 aa	Known RBP	10.88	□□□□□ -0.67
ATG15	YCR068W	LSC2	P53312	427 aa		10.88	□□□□□ -0.67
ATG15	YCR068W	CRD1	Q07560	283 aa		10.88	□□□□□ -0.67
ATG15	YCR068W	TMA16	Q08687	178 aa		10.88	□□□□□ -0.67
ATG15	YCR068W	TIF6	Q12522	245 aa	Known RBP	10.88	□□□□□ -0.67
ATG15	YCR068W	PPS1	P38148	807 aa		10.87	□□□□□ -0.67
ATG15	YCR068W	SLD5	Q03406	294 aa		10.87	□□□□□ -0.67
ATG15	YCR068W	CDC37	P06101	506 aa	Known RBP	10.86	□□□□□ -0.67
ATG15	YCR068W	OM45	P16547	393 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	MRC1	P25588	1096 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	TFC4	P33339	1025 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	UBP15	P50101	1230 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	YGL039W	P53183	348 aa	Known RBP	10.86	□□□□□ -0.67
ATG15	YCR068W	EBS1	Q03466	884 aa	Known RBP	10.86	□□□□□ -0.67
ATG15	YCR068W	TCP1	P12612	559 aa	Known RBP	10.86	□□□□□ -0.67
ATG15	YCR068W	PSO2	P30620	661 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	YKL091C	P33324	310 aa	Known RBP	10.86	□□□□□ -0.67
ATG15	YCR068W	DBP7	P36120	742 aa	Known RBP	10.86	□□□□□ -0.67
ATG15	YCR068W	SAP190	P36123	1033 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	HUL4	P40985	892 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	ATG1	P53104	897 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	YLR225C	Q05948	407 aa	Known RBP	10.86	□□□□□ -0.67
ATG15	YCR068W	TCO89	Q08921	799 aa		10.86	□□□□□ -0.67
ATG15	YCR068W	MAK16	P10962	306 aa	Predicted RBP	10.85	□□□□□ -0.67
ATG15	YCR068W	RGT1	P32862	1170 aa		10.85	□□□□□ -0.67
ATG15	YCR068W	TVP38	P36164	337 aa		10.85	□□□□□ -0.67
ATG15	YCR068W	RPN3	P40016	523 aa	Known RBP	10.85	□□□□□ -0.67
ATG15	YCR068W	MXR1	P40029	184 aa		10.85	□□□□□ -0.67
ATG15	YCR068W	YFL034W	P43564	1073 aa		10.85	□□□□□ -0.67
ATG15	YCR068W	YDL057W	Q07379	328 aa		10.85	□□□□□ -0.67
ATG15	YCR068W	PCK1	P10963	549 aa		10.84	□□□□□ -0.67
ATG15	YCR068W	YET1	P35723	206 aa		10.84	□□□□□ -0.67
ATG15	YCR068W	BIM1	P40013	344 aa		10.84	□□□□□ -0.67
ATG15	YCR068W	ULP2	P40537	1034 aa	Predicted RBP	10.84	□□□□□ -0.67
ATG15	YCR068W	YMR321C	Q04898	105 aa		10.84	□□□□□ -0.67
ATG15	YCR068W	CUR1	Q06469	252 aa		10.84	□□□□□ -0.67
ATG15	YCR068W	YAP7	Q08182	245 aa		10.84	□□□□□ -0.67
ATG15	YCR068W	VID30	P53076	958 aa		10.83	□□□□□ -0.68
ATG15	YCR068W	VPS75	P53853	264 aa		10.83	□□□□□ -0.68
ATG15	YCR068W	NCS2	P53923	493 aa	Predicted RBP	10.83	□□□□□ -0.68
ATG15	YCR068W	SVF1	Q05515	481 aa		10.83	□□□□□ -0.68
ATG15	YCR068W	COG4	Q06096	861 aa		10.83	□□□□□ -0.68
ATG15	YCR068W	YOL075C	Q08234	1294 aa		10.83	□□□□□ -0.68
ATG15	YCR068W	PHO13	P19881	312 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	TIM23	P32897	222 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	PGM2	P37012	569 aa	Known RBP	10.82	□□□□□ -0.68
ATG15	YCR068W	CTM1	P38818	585 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	MGA2	P40578	1113 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	VPS53	P47061	822 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	NBP1	P52919	319 aa	Predicted RBP	10.82	□□□□□ -0.68
ATG15	YCR068W	MET7	Q08645	548 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	MSC6	Q08818	692 aa	Known RBP	10.82	□□□□□ -0.68
ATG15	YCR068W	YPL216W	Q08964	1102 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	YPL277C	Q08989	487 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	CYC8	P14922	966 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	TOS3	P43637	560 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	MDR1	P53258	950 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	MED1	Q12321	566 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	TRM11	Q12463	433 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	SRF1	Q12516	437 aa		10.82	□□□□□ -0.68
ATG15	YCR068W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	10.81	□□□□□ -0.68	not detected
ATG15	YCR068W	SPO11	P23179	398 aa		10.81	□□□□□ -0.68
ATG15	YCR068W	MSH3	P25336	1018 aa		10.81	□□□□□ -0.68
ATG15	YCR068W	RPC53	P25441	422 aa		10.81	□□□□□ -0.68
ATG15	YCR068W	YUR1	P26725	428 aa		10.81	□□□□□ -0.68
ATG15	YCR068W	MRF1	P30775	413 aa	Predicted RBP	10.81	□□□□□ -0.68
ATG15	YCR068W	PXL1	P36166	706 aa		10.81	□□□□□ -0.68
ATG15	YCR068W	FYV8	P46949	817 aa	Known RBP	10.81	□□□□□ -0.68
ATG15	YCR068W	SMC5	Q08204	1093 aa		10.81	□□□□□ -0.68
ATG15	YCR068W	PDC1	P06169	563 aa	Known RBP	10.8	□□□□□ -0.68
ATG15	YCR068W	UBP13	P38187	747 aa		10.8	□□□□□ -0.68
ATG15	YCR068W	MIP6	P38760	659 aa	Known RBP	10.8	□□□□□ -0.68
ATG15	YCR068W	SPT8	P38915	602 aa		10.8	□□□□□ -0.68
ATG15	YCR068W	YEL025C	P39991	1188 aa		10.8	□□□□□ -0.68
ATG15	YCR068W	TOF1	P53840	1238 aa		10.8	□□□□□ -0.68
ATG15	YCR068W	ARK1	P53974	638 aa		10.8	□□□□□ -0.68
ATG15	YCR068W	DBP5	P20449	482 aa	Known RBP	10.79	□□□□□ -0.68
ATG15	YCR068W	CDC48	P25694	835 aa	Known RBP	10.79	□□□□□ -0.68
ATG15	YCR068W	TRK2	P28584	889 aa		10.79	□□□□□ -0.68
ATG15	YCR068W	SPC110	P32380	944 aa		10.79	□□□□□ -0.68
ATG15	YCR068W	YSC83	P32792	385 aa		10.79	□□□□□ -0.68
ATG15	YCR068W	ATG19	P35193	415 aa		10.79	□□□□□ -0.68
ATG15	YCR068W	ROD1	Q02805	837 aa		10.79	□□□□□ -0.68
ATG15	YCR068W	PHO8	P11491	566 aa		10.78	□□□□□ -0.68
ATG15	YCR068W	DAL7	P21826	554 aa		10.78	□□□□□ -0.68
ATG15	YCR068W	SHM1	P37292	490 aa	Predicted RBP	10.78	□□□□□ -0.68
ATG15	YCR068W	EFM2	P38347	419 aa		10.78	□□□□□ -0.68
ATG15	YCR068W	RPS7B	P48164	190 aa	Known RBP	10.78	□□□□□ -0.68
ATG15	YCR068W	CAF130	P53280	1122 aa	Predicted RBP	10.78	□□□□□ -0.68
ATG15	YCR068W	YLL058W	Q12198	575 aa		10.78	□□□□□ -0.68

Retrieved 100 of 5,963 RNA–protein pairs in 93.3 ms