RNA–Protein interactions for RNA: YBR195C

MSI1, Transcript of Subunit of chromatin assembly factor I (CAF-1), yeastyeast

Gene MSI1, Length 1,269 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSI1YBR195C SUV3P32580 737 aa8.19□□□□□ -1.1
MSI1YBR195C YEL025CP39991 1188 aa8.19□□□□□ -1.1
MSI1YBR195C GPD2P41911 440 aaKnown RBP8.19□□□□□ -1.1
MSI1YBR195C YFL040WP43562 540 aa8.19□□□□□ -1.1
MSI1YBR195C DIP5P53388 608 aa8.19□□□□□ -1.1
MSI1YBR195C CBK1P53894 756 aa8.19□□□□□ -1.1
MSI1YBR195C PGA2P53903 129 aa8.19□□□□□ -1.1
MSI1YBR195C FMP30Q02883 468 aa8.19□□□□□ -1.1
MSI1YBR195C VPS72Q03388 795 aa8.19□□□□□ -1.1
MSI1YBR195C ECM30Q06673 1274 aa8.19□□□□□ -1.1
MSI1YBR195C SAM3Q08986 587 aa8.19□□□□□ -1.1
MSI1YBR195C AFT1P22149 690 aa8.18□□□□□ -1.1
MSI1YBR195C FIR1P40020 876 aa8.18□□□□□ -1.1
MSI1YBR195C FYV10P40492 516 aa8.18□□□□□ -1.1
MSI1YBR195C YGR153WP48238 217 aa8.18□□□□□ -1.1
MSI1YBR195C YML020WQ03722 664 aa8.18□□□□□ -1.1
MSI1YBR195C HRQ1Q05549 1077 aa8.18□□□□□ -1.1
MSI1YBR195C PTC5Q12511 572 aa8.18□□□□□ -1.1
MSI1YBR195C ATG11Q12527 1178 aa8.18□□□□□ -1.1
MSI1YBR195C ECM29P38737 1868 aa8.17□□□□□ -1.1
MSI1YBR195C SRD1P09007 221 aa8.17□□□□□ -1.1
MSI1YBR195C HEM1P09950 548 aaPredicted RBP8.17□□□□□ -1.1
MSI1YBR195C WHI3P34761 661 aaKnown RBP8.17□□□□□ -1.1
MSI1YBR195C ADY4Q05955 493 aa8.17□□□□□ -1.1
MSI1YBR195C MMR1Q06324 491 aa8.17□□□□□ -1.1
MSI1YBR195C SMC5Q08204 1093 aa8.17□□□□□ -1.1
MSI1YBR195C LSP1Q12230 341 aaKnown RBP8.17□□□□□ -1.1
MSI1YBR195C HIS4P00815 799 aaKnown RBP8.16□□□□□ -1.1
MSI1YBR195C MIP1P15801 1254 aa8.16□□□□□ -1.1
MSI1YBR195C URA1P28272 314 aaPredicted RBP8.16□□□□□ -1.1
MSI1YBR195C IRE1P32361 1115 aa8.16□□□□□ -1.1
MSI1YBR195C SMY2P32909 740 aaKnown RBP8.16□□□□□ -1.1
MSI1YBR195C DUR3P33413 735 aa8.16□□□□□ -1.1
MSI1YBR195C ATG19P35193 415 aa8.16□□□□□ -1.1
MSI1YBR195C VPS24P36095 224 aaKnown RBP8.16□□□□□ -1.1
MSI1YBR195C DID4P36108 232 aa8.16□□□□□ -1.1
MSI1YBR195C RPN3P40016 523 aaKnown RBP8.16□□□□□ -1.1
MSI1YBR195C ROG3P43602 733 aa8.16□□□□□ -1.1
MSI1YBR195C UBA2P52488 636 aa8.16□□□□□ -1.1
MSI1YBR195C HST1P53685 503 aa8.16□□□□□ -1.1
MSI1YBR195C PEX19Q07418 342 aa8.16□□□□□ -1.1
MSI1YBR195C CKA2P19454 339 aa8.15□□□□□ -1.1
MSI1YBR195C MCM3P24279 971 aaKnown RBP8.15□□□□□ -1.1
MSI1YBR195C KIN82P25341 720 aa8.15□□□□□ -1.1
MSI1YBR195C EDS1P38073 919 aa8.15□□□□□ -1.1
MSI1YBR195C SIP3P38717 1229 aa8.15□□□□□ -1.1
MSI1YBR195C PIH1P38768 344 aa8.15□□□□□ -1.1
MSI1YBR195C ALD5P40047 520 aaKnown RBP8.15□□□□□ -1.1
MSI1YBR195C FIS1P40515 155 aa8.15□□□□□ -1.1
MSI1YBR195C BRE2P43132 505 aa8.15□□□□□ -1.1
MSI1YBR195C TCP1P12612 559 aaKnown RBP8.14□□□□□ -1.11
MSI1YBR195C UBC1P21734 215 aaKnown RBP8.14□□□□□ -1.11
MSI1YBR195C PRP22P24384 1145 aaKnown RBP8.14□□□□□ -1.11
MSI1YBR195C RME1P32338 300 aaKnown RBP8.14□□□□□ -1.11
MSI1YBR195C PTC3P34221 468 aaKnown RBP8.14□□□□□ -1.11
MSI1YBR195C PET10P36139 283 aa8.14□□□□□ -1.11
MSI1YBR195C BDH2P39713 417 aa8.14□□□□□ -1.11
MSI1YBR195C EAF5P39995 279 aa8.14□□□□□ -1.11
MSI1YBR195C ACF4P47129 309 aa8.14□□□□□ -1.11
MSI1YBR195C SGM1P47166 707 aa8.14□□□□□ -1.11
MSI1YBR195C AZR1P50080 613 aa8.14□□□□□ -1.11
MSI1YBR195C COG8Q04632 607 aa8.14□□□□□ -1.11
MSI1YBR195C FUS2Q05670 677 aa8.14□□□□□ -1.11
MSI1YBR195C NOC3Q07896 663 aaPredicted RBP8.14□□□□□ -1.11
MSI1YBR195C YDR524C-BQ3E6R4 66 aa8.14□□□□□ -1.11
MSI1YBR195C TAO3P40468 2376 aa8.13□□□□□ -1.11
MSI1YBR195C GUA1P38625 525 aaKnown RBP8.13□□□□□ -1.11
MSI1YBR195C ULP2P40537 1034 aaPredicted RBP8.13□□□□□ -1.11
MSI1YBR195C DAK2P43550 591 aa8.13□□□□□ -1.11
MSI1YBR195C CLA4P48562 842 aa8.13□□□□□ -1.11
MSI1YBR195C CUE3P53137 624 aaKnown RBP8.13□□□□□ -1.11
MSI1YBR195C NCS2P53923 493 aaPredicted RBP8.13□□□□□ -1.11
MSI1YBR195C PSR2Q07949 397 aa8.13□□□□□ -1.11
MSI1YBR195C NCR1Q12200 1170 aa8.13□□□□□ -1.11
MSI1YBR195C HIF1Q12373 385 aa8.13□□□□□ -1.11
MSI1YBR195C FOB1O13329 566 aa8.12□□□□□ -1.11
MSI1YBR195C YEL076C-AP0CX16 216 aa8.12□□□□□ -1.11
MSI1YBR195C YLR464WP0CX17 216 aa8.12□□□□□ -1.11
MSI1YBR195C PFK1P16861 987 aaKnown RBP8.12□□□□□ -1.11
MSI1YBR195C MBR1P23493 339 aa8.12□□□□□ -1.11
MSI1YBR195C POT1P27796 417 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
MSI1YBR195C MSS51P32335 436 aa8.12□□□□□ -1.11
MSI1YBR195C YEL076CP39971 216 aa8.12□□□□□ -1.11
MSI1YBR195C INP51P40559 946 aaKnown RBP8.12□□□□□ -1.11
MSI1YBR195C HFI1Q12060 488 aa8.12□□□□□ -1.11
MSI1YBR195C LDB19Q12502 818 aa8.12□□□□□ -1.11
MSI1YBR195C DED1P06634 604 aaKnown RBP8.11□□□□□ -1.11
MSI1YBR195C DBP5P20449 482 aaKnown RBP8.11□□□□□ -1.11
MSI1YBR195C RPC53P25441 422 aa8.11□□□□□ -1.11
MSI1YBR195C CDC15P27636 974 aa8.11□□□□□ -1.11
MSI1YBR195C BMH1P29311 267 aaKnown RBP8.11□□□□□ -1.11
MSI1YBR195C EFT1P32324 842 aaKnown RBP8.11□□□□□ -1.11
MSI1YBR195C RFT1P38206 574 aaPredicted RBP8.11□□□□□ -1.11
MSI1YBR195C NUP82P40368 713 aa8.11□□□□□ -1.11
MSI1YBR195C CCT5P40413 562 aaKnown RBP8.11□□□□□ -1.11
MSI1YBR195C HYR1P40581 163 aaKnown RBP8.11□□□□□ -1.11
MSI1YBR195C THI6P41835 540 aa8.11□□□□□ -1.11
MSI1YBR195C VTC2P43585 828 aa8.11□□□□□ -1.11
MSI1YBR195C GUP1P53154 560 aa8.11□□□□□ -1.11
MSI1YBR195C TPO2P53283 614 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 102 ms