RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Srgap3Q812A2 1099 aa19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Gcc1Q9D4H2 778 aa19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Cfdp1O88271 295 aaKnown RBP19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Ipo8Q7TMY7 1010 aa19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Slc39a6Q8C145 765 aa19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 ApobrQ8VBT6 942 aa19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Bicc1Q99MQ1 977 aaKnown RBP19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Sart3Q9JLI8 962 aaKnown RBP19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Cacna1sQ02789 1880 aa19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Col4a1P02463 1669 aa19.11■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Ttll7A4Q9F0 912 aa19.1■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Ccdc27Q3V036 639 aa19.1■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Pm20d1Q8C165 503 aa19.1■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Ppm1mQ8BU27 406 aa19.09■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Cog6Q8R3I3 657 aa19.09■□□□□ 0.65
Ldb3-208ENSMUST00000228044 KnstrnQ9D9Z1 312 aaKnown RBP19.09■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Eif3aP23116 1344 aaKnown RBP19.09■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Erbb4Q61527 1308 aa19.09■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Exoc5Q3TPX4 708 aa19.09■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Ankrd23Q812A3 306 aa19.09■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Nphp1Q9QY53 687 aa19.09■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Wdr63B2RY71 923 aa19.08■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Mmp8O70138 465 aa19.08■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Cwc27Q3TKY6 469 aa19.08■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Ggt6Q6PDE7 497 aa19.08■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Trim52Q8CDV4 233 aa19.08■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Tmc1Q8R4P5 757 aa19.08■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Psrc1Q9D0P7 329 aa19.08■□□□□ 0.65
Ldb3-208ENSMUST00000228044 Atg4a-psA0A0G2JFS9 396 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Tlr7P58681 1050 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Mcm2P97310 904 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Atg4aQ8C9S8 396 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Nav1Q8CH77 1875 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Smarca5Q91ZW3 1051 aaKnown RBP19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Ier5O89113 308 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Map3k13Q1HKZ5 959 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Ankle2Q6P1H6 964 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Ipo9Q91YE6 1041 aa19.07■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Cap2Q9CYT6 476 aa19.06■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Mylk2Q8VCR8 613 aa19.05■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Tnrc6cQ3UHC0 1690 aaKnown RBP19.05■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Ccdc146E9Q9F7 977 aa19.05■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Vps33bP59016 617 aa19.05■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Cers3Q1A3B0 383 aa19.05■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Mum1Q6DID5 682 aa19.05■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Hdac6Q9Z2V5 1149 aa19.05■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Hspa2P17156 633 aa19.04■□□□□ 0.64
Ldb3-208ENSMUST00000228044 MypnQ5DTJ9 1315 aa19.03■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Grm8P47743 908 aa19.03■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Smg7Q5RJH6 1138 aaKnown RBP19.03■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Bcl11aQ9QYE3 773 aa19.03■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Lmbr1lQ9D1E5 489 aa19.03■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Tceal9Q9DD24 104 aa19.03■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Sipa1l3G3X9J0 1776 aa19.02■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Mcmdc2E9Q956 681 aa19.02■□□□□ 0.64
Ldb3-208ENSMUST00000228044 Nhsl1Q8CAF4 1587 aa19.01■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Ddb1Q3U1J4 1140 aaKnown RBP19.01■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Tbc1d32Q3URV1 1296 aa19.01■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Ank1Q02357 1862 aa19.01■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Gm12185Q5NCB2 835 aa19.01■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Zbtb40Q6PCS8 1258 aa19.01■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Emilin2Q8K482 1074 aa19.01■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Kndc1Q0KK55 1742 aa19■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Sf3b2Q3UJB0 878 aaKnown RBP19■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Tgfb1i1Q62219 461 aa19■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Cyp46a1Q9WVK8 500 aa19■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Syde2E9PUP1 1314 aa19■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Ddx58Q6Q899 926 aa18.99■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Dcaf5Q80T85 946 aa18.99■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Eno4Q8C042 619 aa18.99■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Hsp90ab1P11499 724 aaKnown RBP18.98■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Ripor2Q80U16 1078 aa18.98■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Nkx1-2P42580 305 aa18.97■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Slc4a10Q5DTL9 1118 aa18.97■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Clcn1Q64347 994 aa18.97■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Jmjd4Q8BFT6 427 aa18.97■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Cntnap1O54991 1385 aa18.96■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Mfap1aC0HKD8 439 aaKnown RBP18.96■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Mfap1bC0HKD9 439 aaKnown RBP18.96■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Sema6bO54951 886 aa18.96■□□□□ 0.63
Ldb3-208ENSMUST00000228044 Tbc1d9Q3UYK3 1264 aa18.95■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Fkbp5Q64378 456 aa18.95■□□□□ 0.62
Ldb3-208ENSMUST00000228044 CenppQ9CZ92 286 aa18.95■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Mrc1Q61830 1456 aa18.95■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Kiaa0232Q80U59 1396 aaKnown RBP18.95■□□□□ 0.62
Ldb3-208ENSMUST00000228044 InhbeO08717 350 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Hoxa7P02830 229 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Ppm1gQ61074 542 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Nlrp9bQ66X22 1003 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Gigyf1Q99MR1 1044 aaKnown RBP18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Nek4Q9Z1J2 792 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Ltbp1Q8CG19 1712 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Abca3Q8R420 1704 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 NmiO35309 314 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 ChgaP26339 463 aaKnown RBP18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Pde4dQ01063 747 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 VgfQ0VGU4 617 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Bcar3Q9QZK2 820 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Sos2Q02384 1333 aa18.94■□□□□ 0.62
Ldb3-208ENSMUST00000228044 Soga3Q6NZL0 945 aa18.93■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 78.3 ms