Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm25239-201ENSMUST00000174915 86 ntBASIC48.98■■■■■ 5.43
Trim52Q8CDV4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC45.28■■■■■ 4.84
Trim52Q8CDV4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC44.62■■■■■ 4.73
Trim52Q8CDV4 Gm15042-201ENSMUST00000120212 883 ntBASIC42.8■■■■■ 4.44
Trim52Q8CDV4 Gm24109-201ENSMUST00000175489 103 ntBASIC42.5■■■■■ 4.39
Trim52Q8CDV4 Gm15045-201ENSMUST00000117359 883 ntBASIC41.91■■■■■ 4.3
Trim52Q8CDV4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
Trim52Q8CDV4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
Trim52Q8CDV4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC41.36■■■■■ 4.21
Trim52Q8CDV4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
Trim52Q8CDV4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC41■■■■■ 4.15
Trim52Q8CDV4 Gm23366-201ENSMUST00000175022 89 ntBASIC40.88■■■■■ 4.13
Trim52Q8CDV4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
Trim52Q8CDV4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.58■■■■■ 4.09
Trim52Q8CDV4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Trim52Q8CDV4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Trim52Q8CDV4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39.55■■■■□ 3.92
Trim52Q8CDV4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC39.54■■■■□ 3.92
Trim52Q8CDV4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39.5■■■■□ 3.91
Trim52Q8CDV4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39.47■■■■□ 3.91
Trim52Q8CDV4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39.33■■■■□ 3.89
Trim52Q8CDV4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
Trim52Q8CDV4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39.11■■■■□ 3.85
Trim52Q8CDV4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
Trim52Q8CDV4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Trim52Q8CDV4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.99■■■■□ 3.83
Trim52Q8CDV4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.93■■■■□ 3.82
Trim52Q8CDV4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
Trim52Q8CDV4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
Trim52Q8CDV4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
Trim52Q8CDV4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC38.78■■■■□ 3.8
Trim52Q8CDV4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.7■■■■□ 3.79
Trim52Q8CDV4 Gm25238-201ENSMUST00000174914 89 ntBASIC38.68■■■■□ 3.78
Trim52Q8CDV4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC38.6■■■■□ 3.77
Trim52Q8CDV4 Psd-208ENSMUST00000224556 2034 ntBASIC38.53■■■■□ 3.76
Trim52Q8CDV4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Trim52Q8CDV4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC38.39■■■■□ 3.74
Trim52Q8CDV4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC38.01■■■■□ 3.67
Trim52Q8CDV4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37.93■■■■□ 3.66
Trim52Q8CDV4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Trim52Q8CDV4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC37.71■■■■□ 3.63
Trim52Q8CDV4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37.63■■■■□ 3.61
Trim52Q8CDV4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
Trim52Q8CDV4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Trim52Q8CDV4 Gm27325-201ENSMUST00000175467 74 ntBASIC37.53■■■■□ 3.6
Trim52Q8CDV4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC37.48■■■■□ 3.59
Trim52Q8CDV4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Trim52Q8CDV4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Trim52Q8CDV4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC37.44■■■■□ 3.58
Trim52Q8CDV4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC37.3■■■■□ 3.56
Trim52Q8CDV4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37.22■■■■□ 3.55
Trim52Q8CDV4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Trim52Q8CDV4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37.09■■■■□ 3.53
Trim52Q8CDV4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC37.03■■■■□ 3.52
Trim52Q8CDV4 Gm25262-201ENSMUST00000174934 133 ntBASIC36.99■■■■□ 3.51
Trim52Q8CDV4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.93■■■■□ 3.5
Trim52Q8CDV4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
Trim52Q8CDV4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Trim52Q8CDV4 Rab21-202ENSMUST00000218831 843 ntBASIC36.83■■■■□ 3.49
Trim52Q8CDV4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Trim52Q8CDV4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC36.7■■■■□ 3.47
Trim52Q8CDV4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36.63■■■■□ 3.45
Trim52Q8CDV4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
Trim52Q8CDV4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Trim52Q8CDV4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
Trim52Q8CDV4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Trim52Q8CDV4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC36.46■■■■□ 3.43
Trim52Q8CDV4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Trim52Q8CDV4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36.44■■■■□ 3.42
Trim52Q8CDV4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36.43■■■■□ 3.42
Trim52Q8CDV4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36.38■■■■□ 3.41
Trim52Q8CDV4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC36.37■■■■□ 3.41
Trim52Q8CDV4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC36.35■■■■□ 3.41
Trim52Q8CDV4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Trim52Q8CDV4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC36.34■■■■□ 3.41
Trim52Q8CDV4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Trim52Q8CDV4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Trim52Q8CDV4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Trim52Q8CDV4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC36.26■■■■□ 3.4
Trim52Q8CDV4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36.17■■■■□ 3.38
Trim52Q8CDV4 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.16■■■■□ 3.38
Trim52Q8CDV4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC36.15■■■■□ 3.38
Trim52Q8CDV4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Trim52Q8CDV4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Trim52Q8CDV4 Gm26115-201ENSMUST00000175605 87 ntBASIC36.06■■■■□ 3.36
Trim52Q8CDV4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36.02■■■■□ 3.36
Trim52Q8CDV4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.01■■■■□ 3.35
Trim52Q8CDV4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Trim52Q8CDV4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Trim52Q8CDV4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35.97■■■■□ 3.35
Trim52Q8CDV4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Trim52Q8CDV4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35.9■■■■□ 3.34
Trim52Q8CDV4 Gm8109-201ENSMUST00000194076 746 ntBASIC35.89■■■■□ 3.34
Trim52Q8CDV4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.86■■■■□ 3.33
Trim52Q8CDV4 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.85■■■■□ 3.33
Trim52Q8CDV4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.85■■■■□ 3.33
Trim52Q8CDV4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Trim52Q8CDV4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
Trim52Q8CDV4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35.7■■■■□ 3.31
Trim52Q8CDV4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35.69■■■■□ 3.3
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms