Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm25239-201ENSMUST00000174915 86 ntBASIC46.03■■■■■ 4.96
Mmp8O70138 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.33■■■■■ 4.37
Mmp8O70138 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.23■■■■■ 4.35
Mmp8O70138 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.75■■■■■ 4.27
Mmp8O70138 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
Mmp8O70138 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.81■■■■■ 4.12
Mmp8O70138 Gm15042-201ENSMUST00000120212 883 ntBASIC40.7■■■■■ 4.11
Mmp8O70138 Gm15045-201ENSMUST00000117359 883 ntBASIC39.96■■■■□ 3.99
Mmp8O70138 Gm24109-201ENSMUST00000175489 103 ntBASIC39.73■■■■□ 3.95
Mmp8O70138 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Mmp8O70138 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Mmp8O70138 Psd-208ENSMUST00000224556 2034 ntBASIC39.17■■■■□ 3.86
Mmp8O70138 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.82■■■■□ 3.8
Mmp8O70138 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.82■■■■□ 3.8
Mmp8O70138 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.65■■■■□ 3.78
Mmp8O70138 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
Mmp8O70138 Gm23366-201ENSMUST00000175022 89 ntBASIC38.47■■■■□ 3.75
Mmp8O70138 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
Mmp8O70138 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Mmp8O70138 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.22■■■■□ 3.71
Mmp8O70138 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Mmp8O70138 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.08■■■■□ 3.69
Mmp8O70138 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.96■■■■□ 3.67
Mmp8O70138 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.94■■■■□ 3.66
Mmp8O70138 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Mmp8O70138 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.88■■■■□ 3.65
Mmp8O70138 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
Mmp8O70138 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
Mmp8O70138 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Mmp8O70138 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Mmp8O70138 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.46■■■■□ 3.59
Mmp8O70138 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.35■■■■□ 3.57
Mmp8O70138 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.33■■■■□ 3.57
Mmp8O70138 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37.2■■■■□ 3.55
Mmp8O70138 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Mmp8O70138 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Mmp8O70138 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Mmp8O70138 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
Mmp8O70138 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Mmp8O70138 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.71■■■■□ 3.47
Mmp8O70138 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.66■■■■□ 3.46
Mmp8O70138 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Mmp8O70138 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Mmp8O70138 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.36■■■■□ 3.41
Mmp8O70138 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Mmp8O70138 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.28■■■■□ 3.4
Mmp8O70138 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.27■■■■□ 3.4
Mmp8O70138 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Mmp8O70138 Gm25238-201ENSMUST00000174914 89 ntBASIC36.21■■■■□ 3.39
Mmp8O70138 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Mmp8O70138 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Mmp8O70138 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.1■■■■□ 3.37
Mmp8O70138 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
Mmp8O70138 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.02■■■■□ 3.36
Mmp8O70138 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Mmp8O70138 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Mmp8O70138 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Mmp8O70138 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Mmp8O70138 Gm27325-201ENSMUST00000175467 74 ntBASIC35.79■■■■□ 3.32
Mmp8O70138 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Mmp8O70138 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
Mmp8O70138 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.63■■■■□ 3.29
Mmp8O70138 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.61■■■■□ 3.29
Mmp8O70138 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.59■■■■□ 3.29
Mmp8O70138 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
Mmp8O70138 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Mmp8O70138 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.5■■■■□ 3.27
Mmp8O70138 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.48■■■■□ 3.27
Mmp8O70138 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.48■■■■□ 3.27
Mmp8O70138 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.47■■■■□ 3.27
Mmp8O70138 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Mmp8O70138 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.42■■■■□ 3.26
Mmp8O70138 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Mmp8O70138 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Mmp8O70138 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Mmp8O70138 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Mmp8O70138 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.14■■■■□ 3.22
Mmp8O70138 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.09■■■■□ 3.21
Mmp8O70138 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
Mmp8O70138 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Mmp8O70138 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.96■■■■□ 3.19
Mmp8O70138 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Mmp8O70138 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Mmp8O70138 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
Mmp8O70138 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC34.82■■■■□ 3.16
Mmp8O70138 Rab21-202ENSMUST00000218831 843 ntBASIC34.78■■■■□ 3.16
Mmp8O70138 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Mmp8O70138 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Mmp8O70138 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Mmp8O70138 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Mmp8O70138 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Mmp8O70138 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
Mmp8O70138 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Mmp8O70138 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.59■■■■□ 3.13
Mmp8O70138 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Mmp8O70138 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.58■■■■□ 3.13
Mmp8O70138 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Mmp8O70138 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
Mmp8O70138 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Mmp8O70138 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34.44■■■■□ 3.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms