Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Gm25239-201ENSMUST00000174915 86 ntBASIC51.23■■■■■ 5.79
Abca3Q8R420 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC47.79■■■■■ 5.24
Abca3Q8R420 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC46.59■■■■■ 5.05
Abca3Q8R420 Gm24109-201ENSMUST00000175489 103 ntBASIC44.86■■■■■ 4.77
Abca3Q8R420 Gm15042-201ENSMUST00000120212 883 ntBASIC44.37■■■■■ 4.69
Abca3Q8R420 Gm15045-201ENSMUST00000117359 883 ntBASIC43.57■■■■■ 4.57
Abca3Q8R420 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC43.34■■■■■ 4.53
Abca3Q8R420 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC43.07■■■■■ 4.49
Abca3Q8R420 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC43.07■■■■■ 4.49
Abca3Q8R420 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC42.93■■■■■ 4.46
Abca3Q8R420 Gm23366-201ENSMUST00000175022 89 ntBASIC42.63■■■■■ 4.41
Abca3Q8R420 AC153911.1-202ENSMUST00000218534 1034 ntBASIC41.83■■■■■ 4.29
Abca3Q8R420 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC41.44■■■■■ 4.22
Abca3Q8R420 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC41.31■■■■■ 4.2
Abca3Q8R420 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
Abca3Q8R420 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.19
Abca3Q8R420 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
Abca3Q8R420 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
Abca3Q8R420 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
Abca3Q8R420 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC40.69■■■■■ 4.1
Abca3Q8R420 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Abca3Q8R420 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.09
Abca3Q8R420 Gm25238-201ENSMUST00000174914 89 ntBASIC40.57■■■■■ 4.09
Abca3Q8R420 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC40.53■■■■■ 4.08
Abca3Q8R420 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC40.16■■■■■ 4.02
Abca3Q8R420 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC39.84■■■■□ 3.97
Abca3Q8R420 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Abca3Q8R420 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC39.8■■■■□ 3.96
Abca3Q8R420 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.8■■■■□ 3.96
Abca3Q8R420 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39.71■■■■□ 3.95
Abca3Q8R420 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
Abca3Q8R420 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC39.56■■■■□ 3.92
Abca3Q8R420 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
Abca3Q8R420 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC39.43■■■■□ 3.9
Abca3Q8R420 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC39.34■■■■□ 3.89
Abca3Q8R420 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC39.27■■■■□ 3.88
Abca3Q8R420 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC39.26■■■■□ 3.88
Abca3Q8R420 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC39.16■■■■□ 3.86
Abca3Q8R420 Gm25262-201ENSMUST00000174934 133 ntBASIC38.89■■■■□ 3.82
Abca3Q8R420 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Abca3Q8R420 Gm27325-201ENSMUST00000175467 74 ntBASIC38.72■■■■□ 3.79
Abca3Q8R420 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC38.69■■■■□ 3.78
Abca3Q8R420 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
Abca3Q8R420 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
Abca3Q8R420 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38.52■■■■□ 3.76
Abca3Q8R420 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38.49■■■■□ 3.75
Abca3Q8R420 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC38.42■■■■□ 3.74
Abca3Q8R420 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38.38■■■■□ 3.73
Abca3Q8R420 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
Abca3Q8R420 Rab21-202ENSMUST00000218831 843 ntBASIC38.31■■■■□ 3.72
Abca3Q8R420 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.28■■■■□ 3.72
Abca3Q8R420 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC38.19■■■■□ 3.7
Abca3Q8R420 Gm26115-201ENSMUST00000175605 87 ntBASIC38.18■■■■□ 3.7
Abca3Q8R420 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC38.17■■■■□ 3.7
Abca3Q8R420 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
Abca3Q8R420 Gm8109-201ENSMUST00000194076 746 ntBASIC38.14■■■■□ 3.7
Abca3Q8R420 Psd-208ENSMUST00000224556 2034 ntBASIC38.1■■■■□ 3.69
Abca3Q8R420 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.08■■■■□ 3.69
Abca3Q8R420 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC38.03■■■■□ 3.68
Abca3Q8R420 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
Abca3Q8R420 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
Abca3Q8R420 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Abca3Q8R420 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
Abca3Q8R420 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC37.79■■■■□ 3.64
Abca3Q8R420 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Abca3Q8R420 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37.58■■■■□ 3.61
Abca3Q8R420 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC37.58■■■■□ 3.61
Abca3Q8R420 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC37.52■■■■□ 3.6
Abca3Q8R420 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC37.5■■■■□ 3.59
Abca3Q8R420 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37.49■■■■□ 3.59
Abca3Q8R420 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC37.37■■■■□ 3.57
Abca3Q8R420 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
Abca3Q8R420 Gm17082-201ENSMUST00000166043 1091 ntBASIC37.24■■■■□ 3.55
Abca3Q8R420 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC37.23■■■■□ 3.55
Abca3Q8R420 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
Abca3Q8R420 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC37.22■■■■□ 3.55
Abca3Q8R420 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
Abca3Q8R420 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Abca3Q8R420 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
Abca3Q8R420 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC37.11■■■■□ 3.53
Abca3Q8R420 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC37.07■■■■□ 3.52
Abca3Q8R420 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Abca3Q8R420 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC36.92■■■■□ 3.5
Abca3Q8R420 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36.92■■■■□ 3.5
Abca3Q8R420 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Abca3Q8R420 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Abca3Q8R420 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
Abca3Q8R420 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC36.77■■■■□ 3.48
Abca3Q8R420 Gm24804-201ENSMUST00000174982 85 ntBASIC36.76■■■■□ 3.47
Abca3Q8R420 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC36.73■■■■□ 3.47
Abca3Q8R420 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC36.71■■■■□ 3.47
Abca3Q8R420 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Abca3Q8R420 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC36.7■■■■□ 3.47
Abca3Q8R420 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC36.65■■■■□ 3.46
Abca3Q8R420 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Abca3Q8R420 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC36.62■■■■□ 3.45
Abca3Q8R420 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC36.57■■■■□ 3.45
Abca3Q8R420 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Abca3Q8R420 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
Abca3Q8R420 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms