RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	UBP12	P39538	1254 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	VID27	P40157	782 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	RPT2	P40327	437 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	MET18	P40469	1032 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	YIL001W	P40560	513 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	STB1	P42845	420 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	POL31	P46957	487 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	GCD14	P46959	383 aa	Predicted RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	YJR079W	P47126	109 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	ARI1	P53111	347 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	LSG1	P53145	640 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	MAL13	P53338	473 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	COP1	P53622	1201 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	FAR11	P53917	953 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	ESBP6	P53918	673 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	NOP15	P53927	220 aa	Predicted RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	HEF3	P53978	1044 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	BET4	Q00618	327 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	MEH1	Q02205	184 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	GDE1	Q02979	1223 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	MSH6	Q03834	1242 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	PLP1	Q04004	230 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	YKU80	Q04437	629 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	YMR111C	Q04461	462 aa	Predicted RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	HPF1	Q05164	967 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	FUS2	Q05670	677 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	YLR257W	Q06146	321 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	ARR2	Q06597	130 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	SDH5	Q08230	162 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	TFB4	Q12004	338 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	RUD3	Q12234	484 aa	Known RBP	2.89	□□□□□ -1.95
LCL1	YPL056C	MCM16	Q12262	181 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	TCB1	Q12466	1186 aa		2.89	□□□□□ -1.95
LCL1	YPL056C	RIM15	P43565	1770 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	YPR089W	O13585	888 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	UBC1	P21734	215 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	SEC15	P22224	910 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	MBR1	P23493	339 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	PHO84	P25297	587 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	DPB3	P27344	201 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	PAP1	P29468	568 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	PRP40	P33203	583 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	HCS1	P34243	683 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	NUP120	P35729	1037 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	PPX1	P38698	397 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	RTS1	P38903	757 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	CCT4	P39078	528 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	HXT13	P39924	564 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	ARB1	P40024	610 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	MRX1	P40050	688 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	MAM1	P40065	302 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	CCT5	P40413	562 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	HUL4	P40985	892 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	YJL181W	P46987	611 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	ECL1	P48235	211 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	RBL2	P48606	106 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	KEL2	P50090	882 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	YGL242C	P53066	181 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	PRP43	P53131	767 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	RRP46	P53256	223 aa	Predicted RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	RTS3	P53289	263 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	REX2	P54964	269 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	RBA50	Q04418	439 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	SSQ1	Q05931	657 aa	Predicted RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	YLR177W	Q06251	628 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	RSC2	Q06488	889 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	YLH47	Q06493	454 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	BRE1	Q07457	700 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	LAM6	Q08001	693 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	SLK19	Q08581	821 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	YIG1	Q08956	461 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	SGT2	Q12118	346 aa	Known RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	RKM4	Q12504	494 aa		2.88	□□□□□ -1.95
LCL1	YPL056C	SSK22	P25390	1331 aa	Predicted RBP	2.88	□□□□□ -1.95
LCL1	YPL056C	HIS3	P06633	220 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	VAS1	P07806	1104 aa	Known RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	STE6	P12866	1290 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	FRS2	P15625	503 aa	Known RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	ARG1	P22768	420 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	RPC19	P28000	142 aa	Known RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	ITR2	P30606	609 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	ATO2	P32907	282 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	STE5	P32917	917 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	RIB7	P33312	244 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	HSP78	P33416	811 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	MRP8	P35719	219 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	YKR075C	P36155	307 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	CIC1	P38779	376 aa	Known RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	SSP1	P38871	571 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	YHB1	P39676	399 aa	Known RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	ATG36	P46983	293 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	CAF130	P53280	1122 aa	Predicted RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	YKR005C	Q02203	525 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	TFB2	Q02939	513 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	MGR3	Q04472	501 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	POB3	Q04636	552 aa	Known RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	NKP2	Q06162	153 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	CLP1	Q08685	445 aa	Predicted RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	SLM3	Q12093	417 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	GNT1	Q12096	491 aa		2.87	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms