RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	CLB1	P24868	471 aa		6.62	□□□□□ -1.35
VMA4	YOR332W	SWI4	P25302	1093 aa	Known RBP	6.62	□□□□□ -1.35
VMA4	YOR332W	GRX1	P25373	110 aa	Known RBP	6.62	□□□□□ -1.35
VMA4	YOR332W	DPB3	P27344	201 aa		6.62	□□□□□ -1.35
VMA4	YOR332W	BMH2	P34730	273 aa	Known RBP	6.62	□□□□□ -1.35
VMA4	YOR332W	RRP1	P35178	278 aa	Predicted RBP	6.62	□□□□□ -1.35
VMA4	YOR332W	ADE17	P38009	592 aa	Known RBP	6.62	□□□□□ -1.35
VMA4	YOR332W	VPS41	P38959	992 aa		6.62	□□□□□ -1.35
VMA4	YOR332W	AKR1	P39010	764 aa		6.62	□□□□□ -1.35
VMA4	YOR332W	YGL140C	P53120	1219 aa		6.62	□□□□□ -1.35
VMA4	YOR332W	RNT1	Q02555	471 aa		6.62	□□□□□ -1.35
VMA4	YOR332W	GET3	Q12154	354 aa	Known RBP	6.62	□□□□□ -1.35
VMA4	YOR332W	PHO87	P25360	923 aa		6.61	□□□□□ -1.35
VMA4	YOR332W	BMH1	P29311	267 aa	Known RBP	6.61	□□□□□ -1.35
VMA4	YOR332W	MRF1	P30775	413 aa	Predicted RBP	6.61	□□□□□ -1.35
VMA4	YOR332W	IXR1	P33417	597 aa		6.61	□□□□□ -1.35
VMA4	YOR332W	RTT107	P38850	1070 aa		6.61	□□□□□ -1.35
VMA4	YOR332W	BOP3	P53958	396 aa		6.61	□□□□□ -1.35
VMA4	YOR332W	RRB1	Q04225	511 aa	Known RBP	6.61	□□□□□ -1.35
VMA4	YOR332W	GYL1	Q04322	720 aa		6.61	□□□□□ -1.35
VMA4	YOR332W	GFD1	Q04839	188 aa	Known RBP	6.61	□□□□□ -1.35
VMA4	YOR332W	AFT2	Q08957	416 aa		6.61	□□□□□ -1.35
VMA4	YOR332W	GIN4	Q12263	1142 aa		6.61	□□□□□ -1.35
VMA4	YOR332W	HAT1	Q12341	374 aa		6.61	□□□□□ -1.35
VMA4	YOR332W	RIM15	P43565	1770 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	COB	P00163	385 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	SEC23	P15303	768 aa	Known RBP	6.6	□□□□□ -1.35
VMA4	YOR332W	COQ1	P18900	473 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	HCA4	P20448	770 aa	Known RBP	6.6	□□□□□ -1.35
VMA4	YOR332W	VPS1	P21576	704 aa	Known RBP	6.6	□□□□□ -1.35
VMA4	YOR332W	KIP2	P28743	706 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	YEL043W	P32618	956 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	STO1	P34160	861 aa	Known RBP	6.6	□□□□□ -1.35
VMA4	YOR332W	SHM1	P37292	490 aa	Predicted RBP	6.6	□□□□□ -1.35
VMA4	YOR332W	MED8	P38304	223 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	CAJ1	P39101	391 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	ECM1	P39715	212 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	SEC9	P40357	651 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	DOT5	P40553	215 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	CTK3	P46963	296 aa	Predicted RBP	6.6	□□□□□ -1.35
VMA4	YOR332W	RBA50	Q04418	439 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	HCR1	Q05775	265 aa	Known RBP	6.6	□□□□□ -1.35
VMA4	YOR332W	VPS38	Q05919	439 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	RRI2	Q12348	645 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	YEL077C	Q3E7X8	1277 aa		6.6	□□□□□ -1.35
VMA4	YOR332W	HAP4	P14064	554 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	RPO26	P20435	155 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	RRP43	P25359	394 aa	Predicted RBP	6.59	□□□□□ -1.35
VMA4	YOR332W	ASF1	P32447	279 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	VRP1	P37370	817 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	REI1	P38344	393 aa	Predicted RBP	6.59	□□□□□ -1.35
VMA4	YOR332W	NDC80	P40460	691 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	IRC8	P47046	822 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	ALD2	P47771	506 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	ENP2	P48234	707 aa	Known RBP	6.59	□□□□□ -1.35
VMA4	YOR332W	ACS2	P52910	683 aa	Known RBP	6.59	□□□□□ -1.35
VMA4	YOR332W	YMR102C	Q03177	834 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	ISR1	Q06098	443 aa	Known RBP	6.59	□□□□□ -1.35
VMA4	YOR332W	PTC5	Q12511	572 aa		6.59	□□□□□ -1.35
VMA4	YOR332W	FAS2	P19097	1887 aa	Known RBP	6.59	□□□□□ -1.35
VMA4	YOR332W	CHO2	P05374	869 aa	Known RBP	6.58	□□□□□ -1.36
VMA4	YOR332W	SPO11	P23179	398 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	SLD2	P34252	453 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	YET1	P35723	206 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	MUD2	P36084	527 aa	Known RBP	6.58	□□□□□ -1.36
VMA4	YOR332W	SAP190	P36123	1033 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	YKR075C	P36155	307 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	CCT4	P39078	528 aa	Known RBP	6.58	□□□□□ -1.36
VMA4	YOR332W	BUD16	P39988	312 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	IOC3	P43596	787 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	HDA1	P53973	706 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	PUS5	Q06244	254 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	TFC6	Q06339	672 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	HMI1	Q12039	706 aa		6.58	□□□□□ -1.36
VMA4	YOR332W	RPS6A	P0CX37	236 aa	Known RBP	6.57	□□□□□ -1.36
VMA4	YOR332W	RPS6B	P0CX38	236 aa	Predicted RBP	6.57	□□□□□ -1.36
VMA4	YOR332W	SDH2	P21801	266 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	MSH3	P25336	1018 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	SEC65	P29478	273 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	SAC6	P32599	642 aa	Known RBP	6.57	□□□□□ -1.36
VMA4	YOR332W	GRX7	P38068	203 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	MCX1	P38323	520 aa	Predicted RBP	6.57	□□□□□ -1.36
VMA4	YOR332W	EFM2	P38347	419 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	EFM4	P40516	257 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	PTK2	P47116	818 aa	Known RBP	6.57	□□□□□ -1.36
VMA4	YOR332W	ERG5	P54781	538 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	RPS15	Q01855	142 aa	Known RBP	6.57	□□□□□ -1.36
VMA4	YOR332W	FOX2	Q02207	900 aa	Known RBP	6.57	□□□□□ -1.36
VMA4	YOR332W	MMR1	Q06324	491 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	ATG23	Q06671	453 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	ATG20	Q07528	640 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	ATG9	Q12142	997 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	NYV1	Q12255	253 aa		6.57	□□□□□ -1.36
VMA4	YOR332W	MIP1	P15801	1254 aa		6.56	□□□□□ -1.36
VMA4	YOR332W	SER1	P33330	395 aa	Known RBP	6.56	□□□□□ -1.36
VMA4	YOR332W	RXT2	P38255	430 aa		6.56	□□□□□ -1.36
VMA4	YOR332W	RGD1	P38339	666 aa		6.56	□□□□□ -1.36
VMA4	YOR332W	BCD1	P38772	366 aa		6.56	□□□□□ -1.36
VMA4	YOR332W	HUL4	P40985	892 aa		6.56	□□□□□ -1.36
VMA4	YOR332W	YGR237C	P50089	785 aa		6.56	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms