RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C DNM1P54861 757 aa3.93□□□□□ -1.78
SHH3YMR118C WAR1Q03631 944 aa3.93□□□□□ -1.78
SHH3YMR118C VMS1Q04311 632 aaKnown RBP3.93□□□□□ -1.78
SHH3YMR118C SML1Q04964 104 aa3.93□□□□□ -1.78
SHH3YMR118C YCG1Q06680 1035 aa3.93□□□□□ -1.78
SHH3YMR118C TLG2Q08144 397 aa3.93□□□□□ -1.78
SHH3YMR118C YKL068W-AQ3E826 78 aa3.93□□□□□ -1.78
SHH3YMR118C YOL087CQ99247 1116 aa3.93□□□□□ -1.78
SHH3YMR118C Q0182Q9ZZW1 134 aa3.93□□□□□ -1.78
SHH3YMR118C USO1P25386 1790 aa3.93□□□□□ -1.78
SHH3YMR118C MCM1P11746 286 aa3.92□□□□□ -1.78
SHH3YMR118C MSH1P25846 959 aa3.92□□□□□ -1.78
SHH3YMR118C GSY2P27472 705 aa3.92□□□□□ -1.78
SHH3YMR118C MLF3P32047 452 aa3.92□□□□□ -1.78
SHH3YMR118C YKT6P36015 200 aaKnown RBP3.92□□□□□ -1.78
SHH3YMR118C NOC2P39744 710 aaKnown RBP3.92□□□□□ -1.78
SHH3YMR118C NUG1P40010 520 aaKnown RBP3.92□□□□□ -1.78
SHH3YMR118C FYV10P40492 516 aa3.92□□□□□ -1.78
SHH3YMR118C BUD6P41697 788 aa3.92□□□□□ -1.78
SHH3YMR118C YKE2P52553 114 aa3.92□□□□□ -1.78
SHH3YMR118C YGL242CP53066 181 aa3.92□□□□□ -1.78
SHH3YMR118C ALO1P54783 526 aaKnown RBP3.92□□□□□ -1.78
SHH3YMR118C MAK10Q02197 733 aa3.92□□□□□ -1.78
SHH3YMR118C YPL034WQ03083 165 aa3.92□□□□□ -1.78
SHH3YMR118C SWI1P09547 1314 aa3.92□□□□□ -1.78
SHH3YMR118C MATALPHA2P0CY08 210 aa3.91□□□□□ -1.78
SHH3YMR118C HMLALPHA2P0CY09 210 aa3.91□□□□□ -1.78
SHH3YMR118C STE11P23561 717 aa3.91□□□□□ -1.78
SHH3YMR118C SRP40P32583 406 aaPredicted RBP3.91□□□□□ -1.78
SHH3YMR118C RFT1P38206 574 aaPredicted RBP3.91□□□□□ -1.78
SHH3YMR118C ALG14P38242 237 aa3.91□□□□□ -1.78
SHH3YMR118C RFC5P38251 354 aa3.91□□□□□ -1.78
SHH3YMR118C GDT1P38301 280 aaPredicted RBP3.91□□□□□ -1.78
SHH3YMR118C CIC1P38779 376 aaKnown RBP3.91□□□□□ -1.78
SHH3YMR118C UBP12P39538 1254 aa3.91□□□□□ -1.78
SHH3YMR118C APT1P49435 187 aaKnown RBP3.91□□□□□ -1.78
SHH3YMR118C VPS75P53853 264 aa3.91□□□□□ -1.78
SHH3YMR118C ZDS2P54786 942 aa3.91□□□□□ -1.78
SHH3YMR118C YMR102CQ03177 834 aa3.91□□□□□ -1.78
SHH3YMR118C RRB1Q04225 511 aaKnown RBP3.91□□□□□ -1.78
SHH3YMR118C RBA50Q04418 439 aa3.91□□□□□ -1.78
SHH3YMR118C ALE1Q08548 619 aa3.91□□□□□ -1.78
SHH3YMR118C CTI6Q08923 506 aa3.91□□□□□ -1.78
SHH3YMR118C TY1B-NL2Q99337 1749 aaKnown RBP3.91□□□□□ -1.78
SHH3YMR118C UBC1P21734 215 aaKnown RBP3.9□□□□□ -1.79
SHH3YMR118C DPB3P27344 201 aa3.9□□□□□ -1.79
SHH3YMR118C CDC15P27636 974 aa3.9□□□□□ -1.79
SHH3YMR118C RRP1P35178 278 aaPredicted RBP3.9□□□□□ -1.79
SHH3YMR118C PGM2P37012 569 aaKnown RBP3.9□□□□□ -1.79
SHH3YMR118C KTR3P38130 404 aaPredicted RBP3.9□□□□□ -1.79
SHH3YMR118C TPS3P38426 1054 aaKnown RBP3.9□□□□□ -1.79
SHH3YMR118C OSH3P38713 996 aaKnown RBP3.9□□□□□ -1.79
SHH3YMR118C CAJ1P39101 391 aa3.9□□□□□ -1.79
SHH3YMR118C MSH4P40965 878 aaPredicted RBP3.9□□□□□ -1.79
SHH3YMR118C YJR008WP47085 338 aa3.9□□□□□ -1.79
SHH3YMR118C CWC22P53333 577 aaKnown RBP3.9□□□□□ -1.79
SHH3YMR118C APL4Q12028 832 aa3.9□□□□□ -1.79
SHH3YMR118C PGA3Q12746 312 aaKnown RBP3.9□□□□□ -1.79
SHH3YMR118C TSC13Q99190 310 aa3.9□□□□□ -1.79
SHH3YMR118C NHA1Q99271 985 aa3.9□□□□□ -1.79
SHH3YMR118C ENO1P00924 437 aaKnown RBP3.89□□□□□ -1.79
SHH3YMR118C LPD1P09624 499 aaKnown RBP3.89□□□□□ -1.79
SHH3YMR118C PGI1P12709 554 aaKnown RBP3.89□□□□□ -1.79
SHH3YMR118C PEP3P27801 918 aa3.89□□□□□ -1.79
SHH3YMR118C YEL043WP32618 956 aa3.89□□□□□ -1.79
SHH3YMR118C SWE1P32944 819 aa3.89□□□□□ -1.79
SHH3YMR118C SLD2P34252 453 aa3.89□□□□□ -1.79
SHH3YMR118C OMA1P36163 345 aa3.89□□□□□ -1.79
SHH3YMR118C PCH2P38126 564 aa3.89□□□□□ -1.79
SHH3YMR118C REI1P38344 393 aaPredicted RBP3.89□□□□□ -1.79
SHH3YMR118C NDC80P40460 691 aa3.89□□□□□ -1.79
SHH3YMR118C RPS0BP46654 252 aaKnown RBP3.89□□□□□ -1.79
SHH3YMR118C MTO1P53070 669 aa3.89□□□□□ -1.79
SHH3YMR118C PIB2P53191 635 aa3.89□□□□□ -1.79
SHH3YMR118C MAL13P53338 473 aa3.89□□□□□ -1.79
SHH3YMR118C MEC3Q02574 474 aa3.89□□□□□ -1.79
SHH3YMR118C HEH2Q03281 663 aa3.89□□□□□ -1.79
SHH3YMR118C GYL1Q04322 720 aa3.89□□□□□ -1.79
SHH3YMR118C YLR407WQ06070 228 aa3.89□□□□□ -1.79
SHH3YMR118C RPN7Q06103 429 aaKnown RBP3.89□□□□□ -1.79
SHH3YMR118C ESF1Q06344 628 aaKnown RBP3.89□□□□□ -1.79
SHH3YMR118C OMS1Q06668 471 aa3.89□□□□□ -1.79
SHH3YMR118C INP54Q08227 384 aaKnown RBP3.89□□□□□ -1.79
SHH3YMR118C CYT1P07143 309 aa3.88□□□□□ -1.79
SHH3YMR118C PHO13P19881 312 aa3.88□□□□□ -1.79
SHH3YMR118C RPO26P20435 155 aa3.88□□□□□ -1.79
SHH3YMR118C RRP43P25359 394 aaPredicted RBP3.88□□□□□ -1.79
SHH3YMR118C PSY4P38193 441 aa3.88□□□□□ -1.79
SHH3YMR118C CCT4P39078 528 aaKnown RBP3.88□□□□□ -1.79
SHH3YMR118C INP52P50942 1183 aa3.88□□□□□ -1.79
SHH3YMR118C CAF130P53280 1122 aaPredicted RBP3.88□□□□□ -1.79
SHH3YMR118C DMA2P53924 522 aa3.88□□□□□ -1.79
SHH3YMR118C VPS64Q03944 604 aa3.88□□□□□ -1.79
SHH3YMR118C MRX10Q05648 414 aa3.88□□□□□ -1.79
SHH3YMR118C HCR1Q05775 265 aaKnown RBP3.88□□□□□ -1.79
SHH3YMR118C ATG23Q06671 453 aa3.88□□□□□ -1.79
SHH3YMR118C TMA16Q08687 178 aa3.88□□□□□ -1.79
SHH3YMR118C SLM3Q12093 417 aa3.88□□□□□ -1.79
SHH3YMR118C SSK22P25390 1331 aaPredicted RBP3.88□□□□□ -1.79
SHH3YMR118C HXK1P04806 485 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms