RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C TAF13P11747 167 aa5.94□□□□□ -1.46
USB1YLR132C KIP1P28742 1111 aa5.94□□□□□ -1.46
USB1YLR132C AIM26P32858 118 aa5.94□□□□□ -1.46
USB1YLR132C THI80P35202 319 aa5.94□□□□□ -1.46
USB1YLR132C GPB2P39717 880 aa5.94□□□□□ -1.46
USB1YLR132C MRPL22P53881 309 aa5.94□□□□□ -1.46
USB1YLR132C PTC5Q12511 572 aa5.94□□□□□ -1.46
USB1YLR132C ALG3P38179 458 aa5.93□□□□□ -1.46
USB1YLR132C ROD1Q02805 837 aa5.93□□□□□ -1.46
USB1YLR132C RSC58Q07979 502 aa5.93□□□□□ -1.46
USB1YLR132C RCL1Q08096 367 aaPredicted RBP5.93□□□□□ -1.46
USB1YLR132C ECM5Q03214 1411 aa5.92□□□□□ -1.46
USB1YLR132C PRP6P19735 899 aaPredicted RBP5.92□□□□□ -1.46
USB1YLR132C RAD27P26793 382 aa5.92□□□□□ -1.46
USB1YLR132C AIM3P38266 947 aaKnown RBP5.92□□□□□ -1.46
USB1YLR132C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
USB1YLR132C RAT1Q02792 1006 aaKnown RBP5.92□□□□□ -1.46
USB1YLR132C PIN2Q12057 282 aa5.92□□□□□ -1.46
USB1YLR132C GNP1P48813 663 aa5.91□□□□□ -1.46
USB1YLR132C FOL2P51601 243 aaKnown RBP5.91□□□□□ -1.46
USB1YLR132C SIW14P53965 281 aa5.91□□□□□ -1.46
USB1YLR132C THO2P53552 1597 aaKnown RBP5.9□□□□□ -1.46
USB1YLR132C COQ4O13525 335 aa5.9□□□□□ -1.46
USB1YLR132C HXT13P39924 564 aa5.9□□□□□ -1.46
USB1YLR132C HXT17P53631 564 aa5.9□□□□□ -1.46
USB1YLR132C HXT15P54854 567 aa5.9□□□□□ -1.46
USB1YLR132C VPS16Q03308 798 aa5.9□□□□□ -1.46
USB1YLR132C TMA46Q12000 345 aaKnown RBP5.9□□□□□ -1.46
USB1YLR132C YCR015CP25616 317 aa5.89□□□□□ -1.47
USB1YLR132C MKK2P32491 506 aa5.89□□□□□ -1.47
USB1YLR132C BAP2P38084 609 aa5.89□□□□□ -1.47
USB1YLR132C VAC8P39968 578 aa5.89□□□□□ -1.47
USB1YLR132C TAF1P46677 1066 aa5.89□□□□□ -1.47
USB1YLR132C NNF1P47149 201 aa5.89□□□□□ -1.47
USB1YLR132C MRL1Q06815 381 aa5.89□□□□□ -1.47
USB1YLR132C ESC8Q08119 714 aa5.89□□□□□ -1.47
USB1YLR132C NBA1Q08229 501 aaKnown RBP5.89□□□□□ -1.47
USB1YLR132C RTT10Q08924 1013 aa5.89□□□□□ -1.47
USB1YLR132C WRS1Q12109 432 aaKnown RBP5.89□□□□□ -1.47
USB1YLR132C AIM44Q99299 758 aa5.89□□□□□ -1.47
USB1YLR132C SNF5P18480 905 aa5.88□□□□□ -1.47
USB1YLR132C CCZ1P38273 704 aa5.88□□□□□ -1.47
USB1YLR132C KRI1P42846 591 aaKnown RBP5.88□□□□□ -1.47
USB1YLR132C ENT3P47160 408 aa5.88□□□□□ -1.47
USB1YLR132C TNA1P53322 534 aa5.88□□□□□ -1.47
USB1YLR132C ALD6P54115 500 aaKnown RBP5.88□□□□□ -1.47
USB1YLR132C HOS3Q02959 697 aaKnown RBP5.88□□□□□ -1.47
USB1YLR132C YPL260WQ08977 551 aa5.88□□□□□ -1.47
USB1YLR132C SPO21Q12411 609 aa5.88□□□□□ -1.47
USB1YLR132C GCR1P07261 785 aa5.87□□□□□ -1.47
USB1YLR132C SPS1P08458 490 aa5.87□□□□□ -1.47
USB1YLR132C RIM8P53179 542 aa5.87□□□□□ -1.47
USB1YLR132C SNO2P53823 222 aa5.87□□□□□ -1.47
USB1YLR132C BUD4P47136 1447 aa5.86□□□□□ -1.47
USB1YLR132C CDC34P14682 295 aa5.86□□□□□ -1.47
USB1YLR132C YKL222CP35995 705 aa5.86□□□□□ -1.47
USB1YLR132C RPN3P40016 523 aaKnown RBP5.86□□□□□ -1.47
USB1YLR132C GDE1Q02979 1223 aa5.86□□□□□ -1.47
USB1YLR132C YPL277CQ08989 487 aa5.86□□□□□ -1.47
USB1YLR132C HIR3P47171 1648 aa5.85□□□□□ -1.47
USB1YLR132C SOD2P00447 233 aa5.85□□□□□ -1.47
USB1YLR132C FLR1P38124 548 aa5.85□□□□□ -1.47
USB1YLR132C PIK1P39104 1066 aa5.85□□□□□ -1.47
USB1YLR132C YFL054CP43549 646 aa5.85□□□□□ -1.47
USB1YLR132C MDS3P53094 1487 aa5.84□□□□□ -1.47
USB1YLR132C RPS13P05756 151 aaKnown RBP5.84□□□□□ -1.47
USB1YLR132C SYP1P25623 870 aaKnown RBP5.83□□□□□ -1.48
USB1YLR132C TOD6P34219 525 aa5.83□□□□□ -1.48
USB1YLR132C ABZ1P37254 787 aaPredicted RBP5.83□□□□□ -1.48
USB1YLR132C RGD1P38339 666 aa5.83□□□□□ -1.48
USB1YLR132C GIP4P39732 760 aa5.83□□□□□ -1.48
USB1YLR132C SEC26P41810 973 aaKnown RBP5.83□□□□□ -1.48
USB1YLR132C ENV11P53246 860 aa5.83□□□□□ -1.48
USB1YLR132C RSB1Q08417 382 aa5.83□□□□□ -1.48
USB1YLR132C YER152CP10356 443 aa5.82□□□□□ -1.48
USB1YLR132C DBP5P20449 482 aaKnown RBP5.82□□□□□ -1.48
USB1YLR132C PUF4P25339 888 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
USB1YLR132C MLS1P30952 554 aa5.82□□□□□ -1.48
USB1YLR132C CNN1P43618 361 aa5.82□□□□□ -1.48
USB1YLR132C SNF7P39929 240 aaKnown RBP5.81□□□□□ -1.48
USB1YLR132C YJL049WP47048 450 aa5.81□□□□□ -1.48
USB1YLR132C YDR132CQ03900 495 aa5.81□□□□□ -1.48
USB1YLR132C SPO20Q04359 397 aa5.81□□□□□ -1.48
USB1YLR132C CYC1P00044 109 aaPredicted RBP5.8□□□□□ -1.48
USB1YLR132C MPH1P40562 993 aa5.8□□□□□ -1.48
USB1YLR132C FAA4P47912 694 aaKnown RBP5.8□□□□□ -1.48
USB1YLR132C YGR053CP53234 283 aa5.8□□□□□ -1.48
USB1YLR132C SGD1Q06132 899 aa5.8□□□□□ -1.48
USB1YLR132C FAL1Q12099 399 aaKnown RBP5.8□□□□□ -1.48
USB1YLR132C REV3P14284 1504 aa5.79□□□□□ -1.48
USB1YLR132C RER2P35196 286 aa5.79□□□□□ -1.48
USB1YLR132C PEP1P32319 1579 aa5.78□□□□□ -1.48
USB1YLR132C LAM1P38851 1228 aa5.78□□□□□ -1.48
USB1YLR132C TYW3P53177 273 aa5.78□□□□□ -1.48
USB1YLR132C DUT1P33317 147 aa5.77□□□□□ -1.49
USB1YLR132C MEF2P39677 819 aa5.77□□□□□ -1.49
USB1YLR132C HNT2P49775 206 aa5.77□□□□□ -1.49
USB1YLR132C TIF35Q04067 274 aaKnown RBP5.77□□□□□ -1.49
USB1YLR132C SSF2Q12153 453 aaPredicted RBP5.77□□□□□ -1.49
USB1YLR132C RIB2Q12362 591 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms