RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C TY1B-GR3Q12316 1755 aa6.08□□□□□ -1.44
TVP38YKR088C TY1B-ORQ92393 1755 aa6.08□□□□□ -1.44
TVP38YKR088C VPS15P22219 1454 aa6.08□□□□□ -1.44
TVP38YKR088C NOG1Q02892 647 aaKnown RBP6.07□□□□□ -1.44
TVP38YKR088C UTP5Q04177 643 aaKnown RBP6.07□□□□□ -1.44
TVP38YKR088C NBA1Q08229 501 aaKnown RBP6.07□□□□□ -1.44
TVP38YKR088C TAD3Q9URQ3 322 aa6.07□□□□□ -1.44
TVP38YKR088C SPS1P08458 490 aa6.06□□□□□ -1.44
TVP38YKR088C XKS1P42826 600 aa6.06□□□□□ -1.44
TVP38YKR088C RLF2Q12495 606 aa6.06□□□□□ -1.44
TVP38YKR088C SEC3P33332 1336 aaKnown RBP6.05□□□□□ -1.44
TVP38YKR088C YBT1P32386 1661 aa6.05□□□□□ -1.44
TVP38YKR088C MPT5P39016 859 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
TVP38YKR088C YJL045WP47052 634 aa6.05□□□□□ -1.44
TVP38YKR088C SAM37P50110 327 aa6.05□□□□□ -1.44
TVP38YKR088C YCS4Q06156 1176 aa6.05□□□□□ -1.44
TVP38YKR088C PDR10P51533 1564 aa6.05□□□□□ -1.44
TVP38YKR088C TAT2P38967 592 aa6.04□□□□□ -1.44
TVP38YKR088C SPT20P50875 604 aa6.04□□□□□ -1.44
TVP38YKR088C YNR063WP53749 607 aa6.04□□□□□ -1.44
TVP38YKR088C SGD1Q06132 899 aa6.04□□□□□ -1.44
TVP38YKR088C RSC58Q07979 502 aa6.04□□□□□ -1.44
TVP38YKR088C ESC1Q03661 1658 aaKnown RBP6.04□□□□□ -1.44
TVP38YKR088C SPT7P35177 1332 aa6.03□□□□□ -1.44
TVP38YKR088C MSH3P25336 1018 aa6.03□□□□□ -1.44
TVP38YKR088C YDR132CQ03900 495 aa6.03□□□□□ -1.44
TVP38YKR088C DNF1P32660 1571 aa6.02□□□□□ -1.45
TVP38YKR088C TRL1P09880 827 aaKnown RBP6.02□□□□□ -1.45
TVP38YKR088C QNS1P38795 714 aaKnown RBP6.02□□□□□ -1.45
TVP38YKR088C PEX13P80667 386 aa6.02□□□□□ -1.45
TVP38YKR088C IRC20Q06554 1556 aa6.01□□□□□ -1.45
TVP38YKR088C TY1B-JR2P47100 1755 aaKnown RBP6.01□□□□□ -1.45
TVP38YKR088C TY1B-ER2Q03619 1755 aa6.01□□□□□ -1.45
TVP38YKR088C TY1B-MR1Q04214 1755 aa6.01□□□□□ -1.45
TVP38YKR088C TY1B-MR2Q04670 1755 aaKnown RBP6.01□□□□□ -1.45
TVP38YKR088C TY1B-LR1Q12088 1755 aaKnown RBP6.01□□□□□ -1.45
TVP38YKR088C TY1B-NL1Q12112 1755 aa6.01□□□□□ -1.45
TVP38YKR088C TY1B-GR1Q12141 1755 aa6.01□□□□□ -1.45
TVP38YKR088C TY1B-BLQ12490 1755 aa6.01□□□□□ -1.45
TVP38YKR088C VMA4P22203 233 aaKnown RBP6.01□□□□□ -1.45
TVP38YKR088C YSC84P32793 468 aa6.01□□□□□ -1.45
TVP38YKR088C GRS1P38088 690 aaKnown RBP6.01□□□□□ -1.45
TVP38YKR088C CIC1P38779 376 aaKnown RBP6.01□□□□□ -1.45
TVP38YKR088C LAM1P38851 1228 aa6.01□□□□□ -1.45
TVP38YKR088C CAT8P39113 1433 aa6□□□□□ -1.45
TVP38YKR088C MEF2P39677 819 aa6□□□□□ -1.45
TVP38YKR088C HNT2P49775 206 aa6□□□□□ -1.45
TVP38YKR088C GCN5Q03330 439 aa6□□□□□ -1.45
TVP38YKR088C NUP159P40477 1460 aa6□□□□□ -1.45
TVP38YKR088C CDC25P04821 1589 aa6□□□□□ -1.45
TVP38YKR088C GEA2P39993 1459 aaKnown RBP5.99□□□□□ -1.45
TVP38YKR088C VPS53P47061 822 aa5.99□□□□□ -1.45
TVP38YKR088C GPI13Q07830 1017 aa5.99□□□□□ -1.45
TVP38YKR088C COQ4O13525 335 aa5.98□□□□□ -1.45
TVP38YKR088C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
TVP38YKR088C RSM26P47141 266 aa5.98□□□□□ -1.45
TVP38YKR088C TRM2P33753 639 aa5.97□□□□□ -1.45
TVP38YKR088C CCZ1P38273 704 aa5.97□□□□□ -1.45
TVP38YKR088C RKM2Q03942 479 aa5.97□□□□□ -1.45
TVP38YKR088C FRT1Q99332 602 aa5.97□□□□□ -1.45
TVP38YKR088C GCN2P15442 1659 aa5.97□□□□□ -1.45
TVP38YKR088C PUF4P25339 888 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
TVP38YKR088C SQT1P35184 431 aa5.96□□□□□ -1.46
TVP38YKR088C SRB8P25648 1427 aa5.96□□□□□ -1.46
TVP38YKR088C PDR5P33302 1511 aaKnown RBP5.95□□□□□ -1.46
TVP38YKR088C CYC1P00044 109 aaPredicted RBP5.95□□□□□ -1.46
TVP38YKR088C KAR2P16474 682 aaKnown RBP5.95□□□□□ -1.46
TVP38YKR088C PRS1P32895 427 aaKnown RBP5.95□□□□□ -1.46
TVP38YKR088C SEC26P41810 973 aaKnown RBP5.95□□□□□ -1.46
TVP38YKR088C MDJ2P42834 146 aa5.95□□□□□ -1.46
TVP38YKR088C NUT2Q06213 157 aa5.95□□□□□ -1.46
TVP38YKR088C PUS9Q12069 462 aa5.95□□□□□ -1.46
TVP38YKR088C ARO1P08566 1588 aaKnown RBP5.94□□□□□ -1.46
TVP38YKR088C ADD66P36040 267 aa5.94□□□□□ -1.46
TVP38YKR088C RSB1Q08417 382 aa5.94□□□□□ -1.46
TVP38YKR088C GDB1Q06625 1536 aa5.94□□□□□ -1.46
TVP38YKR088C YLR419WQ06698 1435 aaKnown RBP5.93□□□□□ -1.46
TVP38YKR088C PRP40P33203 583 aaKnown RBP5.93□□□□□ -1.46
TVP38YKR088C ERP5P38819 212 aa5.93□□□□□ -1.46
TVP38YKR088C ROT1Q03691 256 aa5.93□□□□□ -1.46
TVP38YKR088C RCL1Q08096 367 aaPredicted RBP5.93□□□□□ -1.46
TVP38YKR088C NTE1Q04958 1679 aa5.93□□□□□ -1.46
TVP38YKR088C RPO21P04050 1733 aaKnown RBP5.93□□□□□ -1.46
TVP38YKR088C DOM34P33309 386 aa5.92□□□□□ -1.46
TVP38YKR088C PEX28P38848 579 aa5.92□□□□□ -1.46
TVP38YKR088C MSE1P48525 536 aa5.92□□□□□ -1.46
TVP38YKR088C KIP1P28742 1111 aa5.91□□□□□ -1.46
TVP38YKR088C TNA1P53322 534 aa5.91□□□□□ -1.46
TVP38YKR088C ULP1Q02724 621 aa5.91□□□□□ -1.46
TVP38YKR088C HOS3Q02959 697 aaKnown RBP5.91□□□□□ -1.46
TVP38YKR088C YBL113CQ7M4S9 792 aa5.91□□□□□ -1.46
TVP38YKR088C UGA4P32837 571 aa5.9□□□□□ -1.46
TVP38YKR088C YPT53P36019 220 aa5.9□□□□□ -1.46
TVP38YKR088C RPA190P10964 1664 aaKnown RBP5.9□□□□□ -1.47
TVP38YKR088C MHP1P43638 1398 aa5.9□□□□□ -1.47
TVP38YKR088C BAP2P38084 609 aa5.89□□□□□ -1.47
TVP38YKR088C RDH54P38086 958 aa5.89□□□□□ -1.47
TVP38YKR088C DAL4Q04895 635 aa5.89□□□□□ -1.47
TVP38YKR088C DUS4Q06063 367 aa5.89□□□□□ -1.47
TVP38YKR088C PDR12Q02785 1511 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms