RNA–Protein interactions for RNA: YKL165C

MCD4, Transcript of Protein involved in GPI anchor synthesis, yeast

Gene MCD4, Length 2,760 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCD4	YKL165C	SDS3	P40505	327 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	CIT3	P43635	486 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	RIM21	P48565	533 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	ELP4	Q02884	456 aa	Known RBP	4.21	□□□□□ -1.74
MCD4	YKL165C	CWC21	Q03375	135 aa	Known RBP	4.21	□□□□□ -1.74
MCD4	YKL165C	GPI13	Q07830	1017 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	REC8	Q12188	680 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	SRF1	Q12516	437 aa		4.21	□□□□□ -1.74
MCD4	YKL165C	RPB2	P08518	1224 aa	Known RBP	4.2	□□□□□ -1.74
MCD4	YKL165C	IDI1	P15496	288 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	CLC1	P17891	233 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	ASF2	P32448	525 aa	Predicted RBP	4.2	□□□□□ -1.74
MCD4	YKL165C	KRE6	P32486	720 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	CBF2	P32504	956 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	MGE1	P38523	228 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	BCD1	P38772	366 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	TMA108	P40462	946 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	ALA1	P40825	983 aa	Known RBP	4.2	□□□□□ -1.74
MCD4	YKL165C	JJJ1	P53863	590 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	MET14	Q02196	202 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	YDR338C	Q05497	695 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	MDM38	Q08179	573 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
MCD4	YKL165C	LSP1	Q12230	341 aa	Known RBP	4.2	□□□□□ -1.74
MCD4	YKL165C	IKI3	Q06706	1349 aa	Known RBP	4.2	□□□□□ -1.74
MCD4	YKL165C	LEU1	P07264	779 aa	Known RBP	4.2	□□□□□ -1.74
MCD4	YKL165C	RSC6	P25632	483 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	CNS1	P33313	385 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	DIB1	Q06819	143 aa	Predicted RBP	4.2	□□□□□ -1.74
MCD4	YKL165C	MDM36	Q06820	579 aa		4.2	□□□□□ -1.74
MCD4	YKL165C	CYT1	P07143	309 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	MIP1	P15801	1254 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	PHO84	P25297	587 aa	Known RBP	4.19	□□□□□ -1.74
MCD4	YKL165C	PLC1	P32383	869 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	SOL3	P38858	249 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	MAD1	P40957	749 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	FOX2	Q02207	900 aa	Known RBP	4.19	□□□□□ -1.74
MCD4	YKL165C	ECM23	Q02710	187 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	BUL2	Q03758	920 aa	Known RBP	4.19	□□□□□ -1.74
MCD4	YKL165C	ARR1	Q06596	294 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	NTG2	Q08214	380 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	RPC40	P07703	335 aa	Known RBP	4.19	□□□□□ -1.74
MCD4	YKL165C	WHI3	P34761	661 aa	Known RBP	4.19	□□□□□ -1.74
MCD4	YKL165C	BYE1	P36106	594 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	PCL7	P40186	285 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	SKP2	P42843	763 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	YAP1802	P53309	568 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	NIS1	P53939	407 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	LSO1	Q3E827	93 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	KEX2	P13134	814 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	DBF20	P32328	564 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	PTR2	P32901	601 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	YBR071W	P38243	211 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	PEX32	P38292	413 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	SMC2	P38989	1170 aa	Known RBP	4.19	□□□□□ -1.74
MCD4	YKL165C	YJL070C	P40361	888 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	MID1	P41821	548 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	ALG2	P43636	503 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	SHE4	P51534	789 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	PRP42	Q03776	544 aa	Known RBP	4.19	□□□□□ -1.74
MCD4	YKL165C	ERV41	Q04651	352 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	YDR344C	Q05510	147 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	BRE4	Q07660	1125 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	CUE5	Q08412	411 aa	Known RBP	4.19	□□□□□ -1.74
MCD4	YKL165C	YLR125W	Q12138	136 aa		4.19	□□□□□ -1.74
MCD4	YKL165C	AI4	P03878	556 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	ARG81	P05085	880 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	RAD16	P31244	790 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	THI4	P32318	326 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	EFB1	P32471	206 aa	Known RBP	4.18	□□□□□ -1.74
MCD4	YKL165C	PXA1	P41909	870 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	APL6	P46682	809 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	MEP3	P53390	489 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	ERV25	P54837	211 aa	Known RBP	4.18	□□□□□ -1.74
MCD4	YKL165C	PKH3	Q03306	898 aa	Predicted RBP	4.18	□□□□□ -1.74
MCD4	YKL165C	TRS130	Q03660	1102 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	SPC19	Q03954	165 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	COG8	Q04632	607 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	SSQ1	Q05931	657 aa	Predicted RBP	4.18	□□□□□ -1.74
MCD4	YKL165C	YVC1	Q12324	675 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	PRT1	P06103	763 aa	Known RBP	4.18	□□□□□ -1.74
MCD4	YKL165C	HSF1	P10961	833 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	YHR131C	P38835	850 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	ILV3	P39522	585 aa	Known RBP	4.18	□□□□□ -1.74
MCD4	YKL165C	SPC72	P39723	622 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	TPA1	P40032	644 aa	Known RBP	4.18	□□□□□ -1.74
MCD4	YKL165C	UPF3	P48412	387 aa	Known RBP	4.18	□□□□□ -1.74
MCD4	YKL165C	YGR237C	P50089	785 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	YML6	P51998	286 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	LSB1	P53281	241 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	YGR266W	P53326	701 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	TAF11	Q04226	346 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	PHO92	Q06390	306 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	RGA2	Q06407	1009 aa		4.18	□□□□□ -1.74
MCD4	YKL165C	SRS2	P12954	1174 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	FAR1	P21268	830 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	CBP3	P21560	335 aa		4.17	□□□□□ -1.74
MCD4	YKL165C	MRS6	P32864	603 aa	Known RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	HAL5	P38970	855 aa	Known RBP	4.17	□□□□□ -1.74
MCD4	YKL165C	PKP1	P40530	394 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms