RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C RDH54P38086 958 aa3.97□□□□□ -1.77
SPG3YDR504C GTF1P53260 183 aaPredicted RBP3.97□□□□□ -1.77
SPG3YDR504C VPS62P53285 467 aa3.97□□□□□ -1.77
SPG3YDR504C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SPG3YDR504C TRL1P09880 827 aaKnown RBP3.96□□□□□ -1.78
SPG3YDR504C DCG1P32460 244 aa3.96□□□□□ -1.78
SPG3YDR504C PEX28P38848 579 aa3.96□□□□□ -1.78
SPG3YDR504C GCV2P49095 1034 aa3.96□□□□□ -1.78
SPG3YDR504C SAM37P50110 327 aa3.96□□□□□ -1.78
SPG3YDR504C SUB2Q07478 446 aaKnown RBP3.96□□□□□ -1.78
SPG3YDR504C FRT1Q99332 602 aa3.96□□□□□ -1.78
SPG3YDR504C SQT1P35184 431 aa3.95□□□□□ -1.78
SPG3YDR504C RFC5P38251 354 aa3.95□□□□□ -1.78
SPG3YDR504C YFL054CP43549 646 aa3.95□□□□□ -1.78
SPG3YDR504C EMC1P25574 760 aa3.94□□□□□ -1.78
SPG3YDR504C PRP40P33203 583 aaKnown RBP3.94□□□□□ -1.78
SPG3YDR504C PBP1P53297 722 aaKnown RBP3.94□□□□□ -1.78
SPG3YDR504C ULP1Q02724 621 aa3.94□□□□□ -1.78
SPG3YDR504C PTC5Q12511 572 aa3.94□□□□□ -1.78
SPG3YDR504C OAR1P35731 278 aa3.93□□□□□ -1.78
SPG3YDR504C GRS1P38088 690 aaKnown RBP3.93□□□□□ -1.78
SPG3YDR504C MOH1P38191 138 aa3.93□□□□□ -1.78
SPG3YDR504C CIC1P38779 376 aaKnown RBP3.93□□□□□ -1.78
SPG3YDR504C YGL140CP53120 1219 aa3.93□□□□□ -1.78
SPG3YDR504C HMI1Q12039 706 aa3.93□□□□□ -1.78
SPG3YDR504C MDJ2P42834 146 aa3.92□□□□□ -1.78
SPG3YDR504C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SPG3YDR504C EST2Q06163 884 aa3.92□□□□□ -1.78
SPG3YDR504C ALG3P38179 458 aa3.91□□□□□ -1.78
SPG3YDR504C SIP5P40210 489 aaKnown RBP3.91□□□□□ -1.78
SPG3YDR504C UBA2P52488 636 aa3.91□□□□□ -1.78
SPG3YDR504C NUT2Q06213 157 aa3.91□□□□□ -1.78
SPG3YDR504C APL1P27351 700 aa3.9□□□□□ -1.79
SPG3YDR504C PLB1P39105 664 aa3.9□□□□□ -1.79
SPG3YDR504C RPN3P40016 523 aaKnown RBP3.9□□□□□ -1.79
SPG3YDR504C DAL4Q04895 635 aa3.9□□□□□ -1.79
SPG3YDR504C DED1P06634 604 aaKnown RBP3.89□□□□□ -1.79
SPG3YDR504C DAK2P43550 591 aa3.89□□□□□ -1.79
SPG3YDR504C RPL34AP87262 121 aaPredicted RBP3.89□□□□□ -1.79
SPG3YDR504C SVS1Q12254 260 aa3.89□□□□□ -1.79
SPG3YDR504C KIN2P13186 1147 aaKnown RBP3.88□□□□□ -1.79
SPG3YDR504C LEO1P38439 464 aa3.88□□□□□ -1.79
SPG3YDR504C TOS4Q06266 489 aa3.88□□□□□ -1.79
SPG3YDR504C NOP12Q08208 459 aaKnown RBP3.88□□□□□ -1.79
SPG3YDR504C KAR2P16474 682 aaKnown RBP3.87□□□□□ -1.79
SPG3YDR504C HRR25P29295 494 aaKnown RBP3.87□□□□□ -1.79
SPG3YDR504C CUE2P36075 443 aaKnown RBP3.87□□□□□ -1.79
SPG3YDR504C ERP5P38819 212 aa3.87□□□□□ -1.79
SPG3YDR504C SIZ1Q04195 904 aa3.86□□□□□ -1.79
SPG3YDR504C YPL260WQ08977 551 aa3.86□□□□□ -1.79
SPG3YDR504C SEC23P15303 768 aaKnown RBP3.85□□□□□ -1.79
SPG3YDR504C IOC3P43596 787 aa3.85□□□□□ -1.79
SPG3YDR504C AIM39Q08223 395 aa3.84□□□□□ -1.79
SPG3YDR504C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SPG3YDR504C RAT1Q02792 1006 aaKnown RBP3.83□□□□□ -1.8
SPG3YDR504C YPL109CQ02981 657 aa3.83□□□□□ -1.8
SPG3YDR504C MSC2Q03455 724 aa3.83□□□□□ -1.8
SPG3YDR504C ADI1Q03677 179 aa3.83□□□□□ -1.8
SPG3YDR504C PFK1P16861 987 aaKnown RBP3.82□□□□□ -1.8
SPG3YDR504C EXG2P52911 562 aa3.82□□□□□ -1.8
SPG3YDR504C TPO1Q07824 586 aa3.82□□□□□ -1.8
SPG3YDR504C YBL113CQ7M4S9 792 aa3.82□□□□□ -1.8
SPG3YDR504C YER152CP10356 443 aa3.81□□□□□ -1.8
SPG3YDR504C PEP7P32609 515 aa3.81□□□□□ -1.8
SPG3YDR504C MND2P40577 368 aa3.81□□□□□ -1.8
SPG3YDR504C PHO4P07270 312 aaKnown RBP3.8□□□□□ -1.8
SPG3YDR504C VPS35P34110 944 aa3.8□□□□□ -1.8
SPG3YDR504C PIC2P40035 300 aa3.8□□□□□ -1.8
SPG3YDR504C ROD1Q02805 837 aa3.8□□□□□ -1.8
SPG3YDR504C QRI1P43123 477 aaKnown RBP3.79□□□□□ -1.8
SPG3YDR504C MET12P46151 657 aa3.79□□□□□ -1.8
SPG3YDR504C TMN2Q04562 672 aa3.79□□□□□ -1.8
SPG3YDR504C ATG13Q06628 738 aa3.79□□□□□ -1.8
SPG3YDR504C ADY3Q07732 790 aa3.79□□□□□ -1.8
SPG3YDR504C HIS5P07172 385 aa3.78□□□□□ -1.8
SPG3YDR504C FAA3P39002 694 aa3.78□□□□□ -1.8
SPG3YDR504C ACE2P21192 770 aa3.77□□□□□ -1.81
SPG3YDR504C GCD6P32501 712 aaKnown RBP3.77□□□□□ -1.81
SPG3YDR504C POA1P38218 177 aa3.77□□□□□ -1.81
SPG3YDR504C STU2P46675 888 aa3.77□□□□□ -1.81
SPG3YDR504C YLR040CQ07988 224 aa3.77□□□□□ -1.81
SPG3YDR504C LAS17Q12446 633 aa3.77□□□□□ -1.81
SPG3YDR504C KCS1Q12494 1050 aa3.77□□□□□ -1.81
SPG3YDR504C BAS1P22035 811 aa3.76□□□□□ -1.81
SPG3YDR504C MKK2P32491 506 aa3.76□□□□□ -1.81
SPG3YDR504C CHA4P43634 648 aa3.76□□□□□ -1.81
SPG3YDR504C MLS1P30952 554 aa3.75□□□□□ -1.81
SPG3YDR504C RGD1P38339 666 aa3.75□□□□□ -1.81
SPG3YDR504C YOL073CQ08232 322 aa3.75□□□□□ -1.81
SPG3YDR504C SUL1P38359 859 aa3.74□□□□□ -1.81
SPG3YDR504C ZRG8P40021 1076 aa3.74□□□□□ -1.81
SPG3YDR504C STB4P50104 949 aa3.74□□□□□ -1.81
SPG3YDR504C HFM1P51979 1187 aa3.74□□□□□ -1.81
SPG3YDR504C YAP7Q08182 245 aa3.74□□□□□ -1.81
SPG3YDR504C MCH5Q08777 521 aa3.74□□□□□ -1.81
SPG3YDR504C OXR1Q08952 273 aa3.74□□□□□ -1.81
SPG3YDR504C AFT2Q08957 416 aa3.74□□□□□ -1.81
SPG3YDR504C BI4P03879 638 aa3.73□□□□□ -1.81
SPG3YDR504C ENA1P13587 1091 aa3.73□□□□□ -1.81
SPG3YDR504C EFT1P32324 842 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms