RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	CLB5	P30283	435 aa		4.94	□□□□□ -1.62
SBE2	YDR351W	YHR131C	P38835	850 aa		4.94	□□□□□ -1.62
SBE2	YDR351W	ROG3	P43602	733 aa		4.94	□□□□□ -1.62
SBE2	YDR351W	CCM1	P48237	864 aa	Predicted RBP	4.94	□□□□□ -1.62
SBE2	YDR351W	NAF1	P53919	492 aa	Known RBP	4.94	□□□□□ -1.62
SBE2	YDR351W	RAT1	Q02792	1006 aa	Known RBP	4.94	□□□□□ -1.62
SBE2	YDR351W	SNZ1	Q03148	297 aa		4.94	□□□□□ -1.62
SBE2	YDR351W	HAS1	Q03532	505 aa	Known RBP	4.94	□□□□□ -1.62
SBE2	YDR351W	MLC2	Q06580	163 aa		4.94	□□□□□ -1.62
SBE2	YDR351W	CSR1	Q06705	408 aa	Known RBP	4.94	□□□□□ -1.62
SBE2	YDR351W	REX3	Q12090	404 aa		4.94	□□□□□ -1.62
SBE2	YDR351W	MRP7	P12687	371 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	CDC34	P14682	295 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	EAP1	P36041	632 aa	Known RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	SAP190	P36123	1033 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	HAL5	P38970	855 aa	Known RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	YMR124W	P39523	943 aa	Known RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	SET2	P46995	733 aa	Known RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	CCT8	P47079	568 aa	Known RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	ISM1	P48526	1002 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	HST1	P53685	503 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	TRS130	Q03660	1102 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	PUN1	Q06991	263 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	SMF3	Q12078	473 aa	Predicted RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	SMC6	Q12749	1114 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	RGR1	P19263	1082 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	GCD6	P32501	712 aa	Known RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	TFC4	P33339	1025 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	PTC3	P34221	468 aa	Known RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	SPC72	P39723	622 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	AGX1	P43567	385 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	CNN1	P43618	361 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	YGR125W	P53273	1036 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	PBP1	P53297	722 aa	Known RBP	4.93	□□□□□ -1.62
SBE2	YDR351W	YNL193W	P53870	558 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	VPS30	Q02948	557 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	TAF11	Q04226	346 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	BRE4	Q07660	1125 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	MCM16	Q12262	181 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	APC2	Q12440	853 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	RKM4	Q12504	494 aa		4.93	□□□□□ -1.62
SBE2	YDR351W	STF1	P01098	86 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	ILS1	P09436	1072 aa	Known RBP	4.92	□□□□□ -1.62
SBE2	YDR351W	SEC23	P15303	768 aa	Known RBP	4.92	□□□□□ -1.62
SBE2	YDR351W	DIT1	P21623	536 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	DUT1	P33317	147 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
SBE2	YDR351W	NIC96	P34077	839 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	VPS35	P34110	944 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	KIC1	P38692	1080 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	CTM1	P38818	585 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	ULI1	P43604	169 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	TRE2	Q08693	809 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	FAP7	Q12055	197 aa	Predicted RBP	4.92	□□□□□ -1.62
SBE2	YDR351W	MSH3	P25336	1018 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	ACP1	P32463	125 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	EFB1	P32471	206 aa	Known RBP	4.92	□□□□□ -1.62
SBE2	YDR351W	NPL6	P32832	435 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
SBE2	YDR351W	KDX1	P36005	433 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	KTR4	P38131	464 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	SRP72	P38688	640 aa	Known RBP	4.92	□□□□□ -1.62
SBE2	YDR351W	ACA1	P39970	489 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	SPR3	P41901	512 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	YJL055W	P47044	245 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	FOL2	P51601	243 aa	Known RBP	4.92	□□□□□ -1.62
SBE2	YDR351W	ACS2	P52910	683 aa	Known RBP	4.92	□□□□□ -1.62
SBE2	YDR351W	NPY1	P53164	384 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	SDA1	P53313	767 aa	Known RBP	4.92	□□□□□ -1.62
SBE2	YDR351W	GAD1	Q04792	585 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	YLR287C	Q05881	355 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	TOS4	Q06266	489 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	YDL073W	Q07454	984 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	GLE1	Q12315	538 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	LDB19	Q12502	818 aa		4.92	□□□□□ -1.62
SBE2	YDR351W	PRT1	P06103	763 aa	Known RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	PET309	P32522	965 aa	Predicted RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	MDE1	P47095	244 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	RNR4	P49723	345 aa	Known RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	MAL11	P53048	616 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	PNG1	Q02890	363 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	GYP1	Q08484	637 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	YRR1	Q12172	810 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	SPO21	Q12411	609 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	CCP1	P00431	361 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	PMS1	P14242	873 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	TRX1	P22217	103 aa	Known RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	CDC48	P25694	835 aa	Known RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	YKL133C	P36066	463 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	RIP-Chip
SBE2	YDR351W	SPT8	P38915	602 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	YGR153W	P48238	217 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	UPF3	P48412	387 aa	Known RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	PRP42	Q03776	544 aa	Known RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	PIB1	Q06651	286 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	RRG1	Q12167	365 aa	Predicted RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	YRM1	Q12340	786 aa		4.91	□□□□□ -1.62
SBE2	YDR351W	HSH49	Q99181	213 aa	Predicted RBP	4.91	□□□□□ -1.62
SBE2	YDR351W	HXK1	P04806	485 aa	Known RBP	4.9	□□□□□ -1.62
SBE2	YDR351W	CLN1	P20437	546 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms