RNA–Protein interactions for RNA: YDR047W

HEM12, Transcript of Uroporphyrinogen decarboxylase, yeast

Gene HEM12, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HEM12	YDR047W	MFM1	Q02783	413 aa		12.07	□□□□□ -0.48
HEM12	YDR047W	ADY4	Q05955	493 aa		12.07	□□□□□ -0.48
HEM12	YDR047W	SUB2	Q07478	446 aa	Known RBP	12.07	□□□□□ -0.48
HEM12	YDR047W	TLG2	Q08144	397 aa		12.07	□□□□□ -0.48
HEM12	YDR047W	PDC1	P06169	563 aa	Known RBP	12.06	□□□□□ -0.48
HEM12	YDR047W	MIP1	P15801	1254 aa		12.06	□□□□□ -0.48
HEM12	YDR047W	MSH3	P25336	1018 aa		12.06	□□□□□ -0.48
HEM12	YDR047W	MRC1	P25588	1096 aa		12.06	□□□□□ -0.48
HEM12	YDR047W	YET1	P35723	206 aa		12.06	□□□□□ -0.48
HEM12	YDR047W	ROG3	P43602	733 aa		12.06	□□□□□ -0.48
HEM12	YDR047W	LSC2	P53312	427 aa		12.06	□□□□□ -0.48
HEM12	YDR047W	EBS1	Q03466	884 aa	Known RBP	12.06	□□□□□ -0.48
HEM12	YDR047W	YLH47	Q06493	454 aa		12.06	□□□□□ -0.48
HEM12	YDR047W	ISW1	P38144	1129 aa		12.05	□□□□□ -0.48
HEM12	YDR047W	AIP1	P46680	615 aa	Known RBP	12.05	□□□□□ -0.48
HEM12	YDR047W	FYV8	P46949	817 aa	Known RBP	12.05	□□□□□ -0.48
HEM12	YDR047W	OYE2	Q03558	400 aa	Known RBP	12.05	□□□□□ -0.48
HEM12	YDR047W	YCG1	Q06680	1035 aa		12.05	□□□□□ -0.48
HEM12	YDR047W	OXR1	Q08952	273 aa		12.05	□□□□□ -0.48
HEM12	YDR047W	YEL076C-A	P0CX16	216 aa		12.04	□□□□□ -0.48
HEM12	YDR047W	YLR464W	P0CX17	216 aa		12.04	□□□□□ -0.48
HEM12	YDR047W	SSA1	P10591	642 aa	Known RBP	12.04	□□□□□ -0.48
HEM12	YDR047W	ISY1	P21374	235 aa	Predicted RBP	12.04	□□□□□ -0.48
HEM12	YDR047W	PSO2	P30620	661 aa		12.04	□□□□□ -0.48
HEM12	YDR047W	PXL1	P36166	706 aa		12.04	□□□□□ -0.48
HEM12	YDR047W	CTM1	P38818	585 aa		12.04	□□□□□ -0.48
HEM12	YDR047W	NDT80	P38830	627 aa		12.04	□□□□□ -0.48
HEM12	YDR047W	YEL076C	P39971	216 aa		12.04	□□□□□ -0.48
HEM12	YDR047W	STR2	P47164	639 aa		12.04	□□□□□ -0.48
HEM12	YDR047W	ILV1	P00927	576 aa	Known RBP	12.03	□□□□□ -0.48
HEM12	YDR047W	PHO88	P38264	188 aa	Predicted RBP	12.03	□□□□□ -0.48
HEM12	YDR047W	SPT8	P38915	602 aa		12.03	□□□□□ -0.48
HEM12	YDR047W	YML037C	Q03703	340 aa		12.03	□□□□□ -0.48
HEM12	YDR047W	RAD18	P10862	487 aa		12.02	□□□□□ -0.49
HEM12	YDR047W	OM45	P16547	393 aa		12.02	□□□□□ -0.49
HEM12	YDR047W	UGA4	P32837	571 aa		12.02	□□□□□ -0.49
HEM12	YDR047W	SEC65	P29478	273 aa		12.01	□□□□□ -0.49
HEM12	YDR047W	YKL091C	P33324	310 aa	Known RBP	12.01	□□□□□ -0.49
HEM12	YDR047W	SHM1	P37292	490 aa	Predicted RBP	12.01	□□□□□ -0.49
HEM12	YDR047W	NUP82	P40368	713 aa		12.01	□□□□□ -0.49
HEM12	YDR047W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	12.01	□□□□□ -0.49	not detected
HEM12	YDR047W	ORC4	P54791	529 aa		12.01	□□□□□ -0.49
HEM12	YDR047W	FUS2	Q05670	677 aa		12.01	□□□□□ -0.49
HEM12	YDR047W	YAP7	Q08182	245 aa		12.01	□□□□□ -0.49
HEM12	YDR047W	APL4	Q12028	832 aa		12.01	□□□□□ -0.49
HEM12	YDR047W	ARP6	Q12509	438 aa		12.01	□□□□□ -0.49
HEM12	YDR047W	SPO11	P23179	398 aa		12	□□□□□ -0.49
HEM12	YDR047W	MIP6	P38760	659 aa	Known RBP	12	□□□□□ -0.49
HEM12	YDR047W	LIF1	P53150	421 aa		12	□□□□□ -0.49
HEM12	YDR047W	GIN4	Q12263	1142 aa		12	□□□□□ -0.49
HEM12	YDR047W	RPS6A	P0CX37	236 aa	Known RBP	11.99	□□□□□ -0.49
HEM12	YDR047W	RPS6B	P0CX38	236 aa	Predicted RBP	11.99	□□□□□ -0.49
HEM12	YDR047W	PER1	P25625	357 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	RAM2	P29703	316 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	OCT1	P35999	772 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	SIP3	P38717	1229 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	RTT107	P38850	1070 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	VHR2	P40041	505 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	PEA2	P40091	420 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	GUP1	P53154	560 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	PGA2	P53903	129 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	SEC5	P89102	971 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	YOL075C	Q08234	1294 aa		11.99	□□□□□ -0.49
HEM12	YDR047W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.98	□□□□□ -0.49	not detected
HEM12	YDR047W	PGM1	P33401	570 aa	Known RBP	11.98	□□□□□ -0.49
HEM12	YDR047W	TGL1	P34163	548 aa		11.98	□□□□□ -0.49
HEM12	YDR047W	PPS1	P38148	807 aa		11.98	□□□□□ -0.49
HEM12	YDR047W	EFM2	P38347	419 aa		11.98	□□□□□ -0.49
HEM12	YDR047W	OSW7	P43611	510 aa		11.98	□□□□□ -0.49
HEM12	YDR047W	HOS3	Q02959	697 aa	Known RBP	11.98	□□□□□ -0.49
HEM12	YDR047W	CWC15	Q03772	175 aa	Known RBP	11.98	□□□□□ -0.49
HEM12	YDR047W	COG4	Q06096	861 aa		11.98	□□□□□ -0.49
HEM12	YDR047W	YPL216W	Q08964	1102 aa		11.98	□□□□□ -0.49
HEM12	YDR047W	PFK1	P16861	987 aa	Known RBP	11.97	□□□□□ -0.49
HEM12	YDR047W	PCH2	P38126	564 aa		11.97	□□□□□ -0.49
HEM12	YDR047W	PIH1	P38768	344 aa		11.97	□□□□□ -0.49
HEM12	YDR047W	CNM67	P53865	581 aa	Known RBP	11.97	□□□□□ -0.49
HEM12	YDR047W	ALF1	P53904	254 aa		11.97	□□□□□ -0.49
HEM12	YDR047W	TMA64	Q04600	565 aa	Known RBP	11.97	□□□□□ -0.49
HEM12	YDR047W	GUD1	Q07729	489 aa		11.97	□□□□□ -0.49
HEM12	YDR047W	HMI1	Q12039	706 aa		11.97	□□□□□ -0.49
HEM12	YDR047W	ATG9	Q12142	997 aa		11.97	□□□□□ -0.49
HEM12	YDR047W	FBP1	P09201	348 aa		11.96	□□□□□ -0.49
HEM12	YDR047W	MAK16	P10962	306 aa	Predicted RBP	11.96	□□□□□ -0.49
HEM12	YDR047W	LEO1	P38439	464 aa		11.96	□□□□□ -0.49
HEM12	YDR047W	HUL4	P40985	892 aa		11.96	□□□□□ -0.49
HEM12	YDR047W	BRE2	P43132	505 aa		11.96	□□□□□ -0.49
HEM12	YDR047W	ALD6	P54115	500 aa	Known RBP	11.96	□□□□□ -0.49
HEM12	YDR047W	YLR287C	Q05881	355 aa		11.96	□□□□□ -0.49
HEM12	YDR047W	VPS38	Q05919	439 aa		11.96	□□□□□ -0.49
HEM12	YDR047W	SPH1	Q06160	661 aa		11.96	□□□□□ -0.49
HEM12	YDR047W	WHI4	Q07655	649 aa	Known RBP	11.96	□□□□□ -0.49
HEM12	YDR047W	NOP58	Q12499	511 aa	Known RBP	11.96	□□□□□ -0.49
HEM12	YDR047W	SAM1	P10659	382 aa	Known RBP	11.95	□□□□□ -0.5
HEM12	YDR047W	RPC53	P25441	422 aa		11.95	□□□□□ -0.5
HEM12	YDR047W	RPC25	P35718	212 aa		11.95	□□□□□ -0.5
HEM12	YDR047W	TOS3	P43637	560 aa		11.95	□□□□□ -0.5
HEM12	YDR047W	YJL007C	P47080	104 aa		11.95	□□□□□ -0.5
HEM12	YDR047W	YLR326W	Q06170	240 aa	Known RBP	11.95	□□□□□ -0.5
HEM12	YDR047W	VAB2	P40003	282 aa		11.94	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms