RNA–Protein interactions for RNA: YCR069W

CPR4, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR4, Length 957 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR4YCR069W WHI3P34761 661 aaKnown RBP5.93□□□□□ -1.46
CPR4YCR069W STM1P39015 273 aaKnown RBP5.93□□□□□ -1.46
CPR4YCR069W MMM1P41800 426 aa5.93□□□□□ -1.46
CPR4YCR069W THI12P42883 340 aa5.93□□□□□ -1.46
CPR4YCR069W THI5P43534 340 aa5.93□□□□□ -1.46
CPR4YCR069W THI11P47183 340 aa5.93□□□□□ -1.46
CPR4YCR069W MAG2Q06436 670 aaKnown RBP5.93□□□□□ -1.46
CPR4YCR069W THI13Q07748 340 aa5.93□□□□□ -1.46
CPR4YCR069W TY1A-GR1Q12085 440 aa5.93□□□□□ -1.46
CPR4YCR069W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.93□□□□□ -1.46
CPR4YCR069W TY1A-OLQ92392 440 aaKnown RBP5.93□□□□□ -1.46
CPR4YCR069W LEU2P04173 364 aaPredicted RBP5.92□□□□□ -1.46
CPR4YCR069W ENP1P38333 483 aaKnown RBP5.92□□□□□ -1.46
CPR4YCR069W PPX1P38698 397 aa5.92□□□□□ -1.46
CPR4YCR069W ADE6P38972 1358 aaKnown RBP5.92□□□□□ -1.46
CPR4YCR069W PHO4P07270 312 aaKnown RBP5.91□□□□□ -1.46
CPR4YCR069W MET4P32389 672 aa5.91□□□□□ -1.46
CPR4YCR069W GCD6P32501 712 aaKnown RBP5.91□□□□□ -1.46
CPR4YCR069W GRX4P32642 244 aa5.91□□□□□ -1.46
CPR4YCR069W CIT3P43635 486 aa5.91□□□□□ -1.46
CPR4YCR069W PRP43P53131 767 aaKnown RBP5.91□□□□□ -1.46
CPR4YCR069W TAP42Q04372 366 aa5.91□□□□□ -1.46
CPR4YCR069W MSC6Q08818 692 aaKnown RBP5.91□□□□□ -1.46
CPR4YCR069W GCD1P09032 578 aaPredicted RBP5.9□□□□□ -1.46
CPR4YCR069W VPS35P34110 944 aa5.9□□□□□ -1.46
CPR4YCR069W YKL077WP36081 392 aa5.9□□□□□ -1.46
CPR4YCR069W MSH4P40965 878 aaPredicted RBP5.9□□□□□ -1.46
CPR4YCR069W RCM1P53972 490 aa5.9□□□□□ -1.46
CPR4YCR069W SDH1Q00711 640 aa5.9□□□□□ -1.46
CPR4YCR069W RPS4AP0CX35 261 aaKnown RBP5.89□□□□□ -1.47
CPR4YCR069W RPS4BP0CX36 261 aaKnown RBP5.89□□□□□ -1.47
CPR4YCR069W PRP40P33203 583 aaKnown RBP5.89□□□□□ -1.47
CPR4YCR069W ARL1P38116 183 aaKnown RBP5.89□□□□□ -1.47
CPR4YCR069W EXO5P38289 585 aa5.89□□□□□ -1.47
CPR4YCR069W SHU2P38957 223 aa5.89□□□□□ -1.47
CPR4YCR069W WHI5Q12416 295 aa5.89□□□□□ -1.47
CPR4YCR069W SEA4P38164 1038 aa5.88□□□□□ -1.47
CPR4YCR069W YGR045CP53229 120 aa5.88□□□□□ -1.47
CPR4YCR069W ELA1P53861 379 aaPredicted RBP5.88□□□□□ -1.47
CPR4YCR069W ORC1P54784 914 aaPredicted RBP5.88□□□□□ -1.47
CPR4YCR069W AVO1Q08236 1176 aa5.88□□□□□ -1.47
CPR4YCR069W PPH3P32345 308 aa5.87□□□□□ -1.47
CPR4YCR069W UGA4P32837 571 aa5.87□□□□□ -1.47
CPR4YCR069W SLS1P42900 643 aa5.87□□□□□ -1.47
CPR4YCR069W DAK2P43550 591 aa5.87□□□□□ -1.47
CPR4YCR069W NOG1Q02892 647 aaKnown RBP5.87□□□□□ -1.47
CPR4YCR069W DAL4Q04895 635 aa5.87□□□□□ -1.47
CPR4YCR069W YOR059CQ08448 450 aaKnown RBP5.87□□□□□ -1.47
CPR4YCR069W NSI1Q12457 570 aa5.87□□□□□ -1.47
CPR4YCR069W NFS1P25374 497 aa5.86□□□□□ -1.47
CPR4YCR069W NEM1P38757 446 aa5.86□□□□□ -1.47
CPR4YCR069W AVT1P47082 602 aa5.86□□□□□ -1.47
CPR4YCR069W ALT1P52893 592 aa5.86□□□□□ -1.47
CPR4YCR069W EAR1Q03212 550 aa5.86□□□□□ -1.47
CPR4YCR069W YML133CQ03099 1374 aa5.85□□□□□ -1.47
CPR4YCR069W YLL067CQ07888 1374 aa5.85□□□□□ -1.47
CPR4YCR069W YLL066CQ99208 1374 aa5.85□□□□□ -1.47
CPR4YCR069W SPT7P35177 1332 aa5.85□□□□□ -1.47
CPR4YCR069W RPP0P05317 312 aaKnown RBP5.85□□□□□ -1.47
CPR4YCR069W KAR2P16474 682 aaKnown RBP5.85□□□□□ -1.47
CPR4YCR069W SEC20P28791 383 aa5.85□□□□□ -1.47
CPR4YCR069W SMY2P32909 740 aaKnown RBP5.85□□□□□ -1.47
CPR4YCR069W PEX13P80667 386 aa5.85□□□□□ -1.47
CPR4YCR069W ULP1Q02724 621 aa5.85□□□□□ -1.47
CPR4YCR069W TOS4Q06266 489 aa5.85□□□□□ -1.47
CPR4YCR069W OXR1Q08952 273 aa5.85□□□□□ -1.47
CPR4YCR069W MSH3P25336 1018 aa5.84□□□□□ -1.47
CPR4YCR069W NNK1P36003 928 aa5.84□□□□□ -1.47
CPR4YCR069W OYE3P41816 400 aaPredicted RBP5.84□□□□□ -1.47
CPR4YCR069W YFR016CP43597 1233 aaKnown RBP5.84□□□□□ -1.47
CPR4YCR069W RSM26P47141 266 aa5.84□□□□□ -1.47
CPR4YCR069W SQT1P35184 431 aa5.83□□□□□ -1.48
CPR4YCR069W YAR028WP39548 234 aa5.82□□□□□ -1.48
CPR4YCR069W IRC24P40580 263 aa5.82□□□□□ -1.48
CPR4YCR069W SEN54Q02825 467 aaPredicted RBP5.82□□□□□ -1.48
CPR4YCR069W UTP5Q04177 643 aaKnown RBP5.82□□□□□ -1.48
CPR4YCR069W YVC1Q12324 675 aa5.82□□□□□ -1.48
CPR4YCR069W TY4B-HP0C2J7 1802 aa5.82□□□□□ -1.48
CPR4YCR069W TY4B-JP47024 1803 aa5.82□□□□□ -1.48
CPR4YCR069W RRP5Q05022 1729 aaKnown RBP5.82□□□□□ -1.48
CPR4YCR069W RPO41P13433 1351 aaKnown RBP5.81□□□□□ -1.48
CPR4YCR069W RPT1P33299 467 aaKnown RBP5.81□□□□□ -1.48
CPR4YCR069W YRB30P53107 440 aaPredicted RBP5.81□□□□□ -1.48
CPR4YCR069W APC1P53886 1748 aa5.8□□□□□ -1.48
CPR4YCR069W YRF1-2P40105 1681 aa5.8□□□□□ -1.48
CPR4YCR069W LRG1P35688 1017 aa5.8□□□□□ -1.48
CPR4YCR069W POL12P38121 705 aaPredicted RBP5.8□□□□□ -1.48
CPR4YCR069W PEX28P38848 579 aa5.8□□□□□ -1.48
CPR4YCR069W XKS1P42826 600 aa5.8□□□□□ -1.48
CPR4YCR069W YPL109CQ02981 657 aa5.8□□□□□ -1.48
CPR4YCR069W TRE1Q08919 783 aa5.8□□□□□ -1.48
CPR4YCR069W EDE1P34216 1381 aa5.8□□□□□ -1.48
CPR4YCR069W VMA4P22203 233 aaKnown RBP5.79□□□□□ -1.48
CPR4YCR069W FAA3P39002 694 aa5.79□□□□□ -1.48
CPR4YCR069W CTF4Q01454 927 aa5.79□□□□□ -1.48
CPR4YCR069W ADI1Q03677 179 aa5.79□□□□□ -1.48
CPR4YCR069W TPP1Q03796 238 aa5.79□□□□□ -1.48
CPR4YCR069W PUS7Q08647 676 aaKnown RBP5.79□□□□□ -1.48
CPR4YCR069W HXK1P04806 485 aaKnown RBP5.78□□□□□ -1.48
CPR4YCR069W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms