RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
H3F3B-206ENST00000587560 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
H3F3B-206ENST00000587560 ABCC9O60706 1549 aa37.92■■■■□ 3.66
H3F3B-206ENST00000587560 DNAJC5BQ9UF47 199 aa37.17■■■■□ 3.54
H3F3B-206ENST00000587560 ZCCHC6Q5VYS8 1495 aaKnown RBP36.4■■■■□ 3.42
H3F3B-206ENST00000587560 DCAF1Q9Y4B6 1507 aa36.08■■■■□ 3.37
H3F3B-206ENST00000587560 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
H3F3B-206ENST00000587560 NACADO15069 1562 aa35.89■■■■□ 3.34
H3F3B-206ENST00000587560 DCAF8L2P0C7V8 631 aa35.75■■■■□ 3.31
H3F3B-206ENST00000587560 RB1CC1Q8TDY2 1594 aa35.73■■■■□ 3.31
H3F3B-206ENST00000587560 DNAJC5Q9H3Z4 198 aa35.33■■■■□ 3.25
H3F3B-206ENST00000587560 UNC13AQ9UPW8 1703 aa35.05■■■■□ 3.2
H3F3B-206ENST00000587560 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
H3F3B-206ENST00000587560 PABPN1Q86U42 306 aaKnown RBP eCLIP34.97■■■■□ 3.19
H3F3B-206ENST00000587560 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
H3F3B-206ENST00000587560 SHROOM4Q9ULL8 1493 aa34.58■■■■□ 3.13
H3F3B-206ENST00000587560 CECR2Q9BXF3 1484 aa34.32■■■■□ 3.08
H3F3B-206ENST00000587560 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
H3F3B-206ENST00000587560 EIF4G1Q04637 1599 aaKnown RBP33.69■■■□□ 2.98
H3F3B-206ENST00000587560 BAZ1AQ9NRL2 1556 aaPredicted RBP33.63■■■□□ 2.97
H3F3B-206ENST00000587560 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
H3F3B-206ENST00000587560 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
H3F3B-206ENST00000587560 RSF1Q96T23 1441 aaPredicted RBP33.38■■■□□ 2.93
H3F3B-206ENST00000587560 CUX2O14529 1486 aa33.37■■■□□ 2.93
H3F3B-206ENST00000587560 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
H3F3B-206ENST00000587560 ATAD2BQ9ULI0 1458 aa33.24■■■□□ 2.91
H3F3B-206ENST00000587560 SMARCA2P51531 1590 aa33.2■■■□□ 2.91
H3F3B-206ENST00000587560 WIZO95785 1651 aa33.19■■■□□ 2.9
H3F3B-206ENST00000587560 NCAPD3P42695 1498 aa33.13■■■□□ 2.89
H3F3B-206ENST00000587560 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
H3F3B-206ENST00000587560 TRIM41Q8WV44 630 aa33.02■■■□□ 2.88
H3F3B-206ENST00000587560 BAZ1BQ9UIG0 1483 aaKnown RBP32.93■■■□□ 2.86
H3F3B-206ENST00000587560 TOP2AP11388 1531 aaKnown RBP32.88■■■□□ 2.85
H3F3B-206ENST00000587560 SUPT5HO00267 1087 aaKnown RBP32.84■■■□□ 2.85
H3F3B-206ENST00000587560 ERCC6Q03468 1493 aa32.79■■■□□ 2.84
H3F3B-206ENST00000587560 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
H3F3B-206ENST00000587560 THOC2Q8NI27 1593 aaKnown RBP32.19■■■□□ 2.74
H3F3B-206ENST00000587560 CFTRP13569 1480 aa32.15■■■□□ 2.74
H3F3B-206ENST00000587560 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
H3F3B-206ENST00000587560 LAMC3Q9Y6N6 1575 aa32.12■■■□□ 2.73
H3F3B-206ENST00000587560 NESP48681 1621 aa32.11■■■□□ 2.73
H3F3B-206ENST00000587560 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
H3F3B-206ENST00000587560 PDS5BQ9NTI5 1447 aa31.81■■■□□ 2.68
H3F3B-206ENST00000587560 FANCD2Q9BXW9 1451 aa31.77■■■□□ 2.68
H3F3B-206ENST00000587560 KIF21AQ7Z4S6 1674 aa31.76■■■□□ 2.67
H3F3B-206ENST00000587560 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
H3F3B-206ENST00000587560 MRC2Q9UBG0 1479 aa31.48■■■□□ 2.63
H3F3B-206ENST00000587560 ABCC8Q09428 1581 aa31.47■■■□□ 2.63
H3F3B-206ENST00000587560 OSCARQ8IYS5 282 aa31.47■■■□□ 2.63
H3F3B-206ENST00000587560 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
H3F3B-206ENST00000587560 RIMBP3CA6NJZ7 1639 aa31.43■■■□□ 2.62
H3F3B-206ENST00000587560 RIMBP3BA6NNM3 1639 aa31.43■■■□□ 2.62
H3F3B-206ENST00000587560 RIMBP3Q9UFD9 1639 aa31.43■■■□□ 2.62
H3F3B-206ENST00000587560 AEBP2Q6ZN18 517 aaPredicted RBP31.42■■■□□ 2.62
H3F3B-206ENST00000587560 WDR62O43379 1518 aa31.42■■■□□ 2.62
H3F3B-206ENST00000587560 CUX1P39880 1505 aa31.41■■■□□ 2.62
H3F3B-206ENST00000587560 WRNQ14191 1432 aaPredicted RBP eCLIP31.4■■■□□ 2.625e-8■■□□□ 14.3
H3F3B-206ENST00000587560 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.62
H3F3B-206ENST00000587560 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
H3F3B-206ENST00000587560 BIVM-ERCC5R4GMW8 1640 aa31.35■■■□□ 2.61
H3F3B-206ENST00000587560 SYNJ1O43426 1573 aa31.34■■■□□ 2.61
H3F3B-206ENST00000587560 TOP2BQ02880 1626 aa31.32■■■□□ 2.6
H3F3B-206ENST00000587560 CHIC1Q5VXU3 224 aa31.18■■■□□ 2.58
H3F3B-206ENST00000587560 FGD5Q6ZNL6 1462 aa31.15■■■□□ 2.58
H3F3B-206ENST00000587560 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
H3F3B-206ENST00000587560 ARHGEF11O15085 1522 aa31.1■■■□□ 2.57
H3F3B-206ENST00000587560 TRHP20396 242 aaPredicted RBP31.07■■■□□ 2.56
H3F3B-206ENST00000587560 TARBP1Q13395 1621 aaKnown RBP31.03■■■□□ 2.56
H3F3B-206ENST00000587560 SOGA1O94964 1423 aa30.98■■■□□ 2.55
H3F3B-206ENST00000587560 IFT140Q96RY7 1462 aa30.97■■■□□ 2.55
H3F3B-206ENST00000587560 RAD54L2Q9Y4B4 1467 aa30.97■■■□□ 2.55
H3F3B-206ENST00000587560 WDR97A6NE52 1622 aa30.97■■■□□ 2.55
H3F3B-206ENST00000587560 ABCA10Q8WWZ4 1543 aa30.93■■■□□ 2.54
H3F3B-206ENST00000587560 CYB5RLQ6IPT4 315 aa30.89■■■□□ 2.54
H3F3B-206ENST00000587560 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
H3F3B-206ENST00000587560 ABCA5Q8WWZ7 1642 aa30.77■■■□□ 2.52
H3F3B-206ENST00000587560 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
H3F3B-206ENST00000587560 TDRD9Q8NDG6 1382 aaKnown RBP30.69■■■□□ 2.5
H3F3B-206ENST00000587560 ARAP1Q96P48 1450 aa30.68■■■□□ 2.5
H3F3B-206ENST00000587560 AQRO60306 1485 aaKnown RBP eCLIP30.67■■■□□ 2.51e-21■■■■□ 20.9
H3F3B-206ENST00000587560 RUSC2Q8N2Y8 1516 aa30.67■■■□□ 2.5
H3F3B-206ENST00000587560 KIF27Q86VH2 1401 aa30.66■■■□□ 2.5
H3F3B-206ENST00000587560 GAPVD1Q14C86 1478 aa30.64■■■□□ 2.5
H3F3B-206ENST00000587560 PBRM1Q86U86 1689 aa30.6■■■□□ 2.49
H3F3B-206ENST00000587560 EEA1Q15075 1411 aa30.56■■■□□ 2.48
H3F3B-206ENST00000587560 ERICH3Q5RHP9 1530 aa30.56■■■□□ 2.48
H3F3B-206ENST00000587560 GRIN2BQ13224 1484 aa30.56■■■□□ 2.48
H3F3B-206ENST00000587560 IGF1RP08069 1367 aa30.52■■■□□ 2.48
H3F3B-206ENST00000587560 ILDR1Q86SU0 546 aaPredicted RBP30.51■■■□□ 2.47
H3F3B-206ENST00000587560 MAGI1Q96QZ7 1491 aaPredicted RBP30.42■■■□□ 2.46
H3F3B-206ENST00000587560 SNAPC4Q5SXM2 1469 aa30.41■■■□□ 2.46
H3F3B-206ENST00000587560 CUL7Q14999 1698 aa30.4■■■□□ 2.46
H3F3B-206ENST00000587560 ADAMTS12P58397 1594 aa30.4■■■□□ 2.46
H3F3B-206ENST00000587560 CSRNP3Q8WYN3 585 aa30.37■■■□□ 2.45
H3F3B-206ENST00000587560 PRXQ9BXM0 1461 aa30.35■■■□□ 2.45
H3F3B-206ENST00000587560 CHD1O14646 1710 aa30.35■■■□□ 2.45
H3F3B-206ENST00000587560 FHAD1B1AJZ9 1412 aa30.32■■■□□ 2.44
H3F3B-206ENST00000587560 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
H3F3B-206ENST00000587560 FAM9AQ8IZU1 332 aaPredicted RBP30.29■■■□□ 2.44
H3F3B-206ENST00000587560 SYNJ2O15056 1496 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms