RNA–Protein interactions for RNA: ENST00000613347.1

NEAT1_3.1-201, humanhuman

BASIC

Gene NEAT1_3, Length 159 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1_3.1-201ENST00000613347 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
NEAT1_3.1-201ENST00000613347 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
NEAT1_3.1-201ENST00000613347 ABCC9O60706 1549 aa23.87■■□□□ 1.41
NEAT1_3.1-201ENST00000613347 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
NEAT1_3.1-201ENST00000613347 NACADO15069 1562 aa22.93■■□□□ 1.26
NEAT1_3.1-201ENST00000613347 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
NEAT1_3.1-201ENST00000613347 MYO15BQ96JP2 1530 aa22.76■■□□□ 1.23
NEAT1_3.1-201ENST00000613347 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
NEAT1_3.1-201ENST00000613347 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.21
NEAT1_3.1-201ENST00000613347 UNC13AQ9UPW8 1703 aa22.44■■□□□ 1.18
NEAT1_3.1-201ENST00000613347 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
NEAT1_3.1-201ENST00000613347 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
NEAT1_3.1-201ENST00000613347 SCRIBQ14160 1630 aa22.1■■□□□ 1.13
NEAT1_3.1-201ENST00000613347 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
NEAT1_3.1-201ENST00000613347 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
NEAT1_3.1-201ENST00000613347 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
NEAT1_3.1-201ENST00000613347 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
NEAT1_3.1-201ENST00000613347 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
NEAT1_3.1-201ENST00000613347 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
NEAT1_3.1-201ENST00000613347 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.98
NEAT1_3.1-201ENST00000613347 NCAPD3P42695 1498 aa21.14■□□□□ 0.98
NEAT1_3.1-201ENST00000613347 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
NEAT1_3.1-201ENST00000613347 ATAD2BQ9ULI0 1458 aa21.09■□□□□ 0.97
NEAT1_3.1-201ENST00000613347 HMGXB3Q12766 1538 aa21.01■□□□□ 0.95
NEAT1_3.1-201ENST00000613347 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
NEAT1_3.1-201ENST00000613347 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
NEAT1_3.1-201ENST00000613347 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
NEAT1_3.1-201ENST00000613347 WIZO95785 1651 aa20.73■□□□□ 0.91
NEAT1_3.1-201ENST00000613347 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
NEAT1_3.1-201ENST00000613347 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
NEAT1_3.1-201ENST00000613347 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
NEAT1_3.1-201ENST00000613347 NESP48681 1621 aa20.6■□□□□ 0.89
NEAT1_3.1-201ENST00000613347 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.87
NEAT1_3.1-201ENST00000613347 CUX2O14529 1486 aa20.5■□□□□ 0.87
NEAT1_3.1-201ENST00000613347 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
NEAT1_3.1-201ENST00000613347 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
NEAT1_3.1-201ENST00000613347 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
NEAT1_3.1-201ENST00000613347 THOC2Q8NI27 1593 aaKnown RBP20.35■□□□□ 0.85
NEAT1_3.1-201ENST00000613347 CFTRP13569 1480 aa20.34■□□□□ 0.85
NEAT1_3.1-201ENST00000613347 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
NEAT1_3.1-201ENST00000613347 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
NEAT1_3.1-201ENST00000613347 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
NEAT1_3.1-201ENST00000613347 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
NEAT1_3.1-201ENST00000613347 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
NEAT1_3.1-201ENST00000613347 WDR62O43379 1518 aa20.18■□□□□ 0.82
NEAT1_3.1-201ENST00000613347 DNAJC5Q9H3Z4 198 aa20.08■□□□□ 0.81
NEAT1_3.1-201ENST00000613347 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
NEAT1_3.1-201ENST00000613347 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
NEAT1_3.1-201ENST00000613347 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
NEAT1_3.1-201ENST00000613347 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
NEAT1_3.1-201ENST00000613347 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
NEAT1_3.1-201ENST00000613347 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
NEAT1_3.1-201ENST00000613347 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
NEAT1_3.1-201ENST00000613347 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
NEAT1_3.1-201ENST00000613347 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
NEAT1_3.1-201ENST00000613347 CUX1P39880 1505 aa19.67■□□□□ 0.74
NEAT1_3.1-201ENST00000613347 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
NEAT1_3.1-201ENST00000613347 SOGA1O94964 1423 aa19.66■□□□□ 0.74
NEAT1_3.1-201ENST00000613347 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
NEAT1_3.1-201ENST00000613347 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
NEAT1_3.1-201ENST00000613347 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
NEAT1_3.1-201ENST00000613347 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
NEAT1_3.1-201ENST00000613347 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.73
NEAT1_3.1-201ENST00000613347 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
NEAT1_3.1-201ENST00000613347 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
NEAT1_3.1-201ENST00000613347 TOP2BQ02880 1626 aa19.5■□□□□ 0.71
NEAT1_3.1-201ENST00000613347 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
NEAT1_3.1-201ENST00000613347 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
NEAT1_3.1-201ENST00000613347 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
NEAT1_3.1-201ENST00000613347 CHD1O14646 1710 aa19.45■□□□□ 0.7
NEAT1_3.1-201ENST00000613347 SYNJ1O43426 1573 aa19.43■□□□□ 0.7
NEAT1_3.1-201ENST00000613347 GAPVD1Q14C86 1478 aa19.42■□□□□ 0.7
NEAT1_3.1-201ENST00000613347 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
NEAT1_3.1-201ENST00000613347 FBLN2P98095 1184 aa19.41■□□□□ 0.7
NEAT1_3.1-201ENST00000613347 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
NEAT1_3.1-201ENST00000613347 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
NEAT1_3.1-201ENST00000613347 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
NEAT1_3.1-201ENST00000613347 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
NEAT1_3.1-201ENST00000613347 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
NEAT1_3.1-201ENST00000613347 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
NEAT1_3.1-201ENST00000613347 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
NEAT1_3.1-201ENST00000613347 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
NEAT1_3.1-201ENST00000613347 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
NEAT1_3.1-201ENST00000613347 ARHGEF11O15085 1522 aa19.26■□□□□ 0.67
NEAT1_3.1-201ENST00000613347 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
NEAT1_3.1-201ENST00000613347 CLASP1Q7Z460 1538 aa19.22■□□□□ 0.67
NEAT1_3.1-201ENST00000613347 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
NEAT1_3.1-201ENST00000613347 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
NEAT1_3.1-201ENST00000613347 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
NEAT1_3.1-201ENST00000613347 KIF27Q86VH2 1401 aa19.14■□□□□ 0.65
NEAT1_3.1-201ENST00000613347 CYB5RLQ6IPT4 315 aa19.12■□□□□ 0.65
NEAT1_3.1-201ENST00000613347 NUP160Q12769 1436 aa19.1■□□□□ 0.65
NEAT1_3.1-201ENST00000613347 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
NEAT1_3.1-201ENST00000613347 CEP170Q5SW79 1584 aa19.07■□□□□ 0.64
NEAT1_3.1-201ENST00000613347 IGF1RP08069 1367 aa19.06■□□□□ 0.64
NEAT1_3.1-201ENST00000613347 CUL7Q14999 1698 aa19.05■□□□□ 0.64
NEAT1_3.1-201ENST00000613347 SHROOM2Q13796 1616 aa19■□□□□ 0.63
NEAT1_3.1-201ENST00000613347 CARMIL1Q5VZK9 1371 aa18.95■□□□□ 0.62
NEAT1_3.1-201ENST00000613347 JPH4Q96JJ6 628 aa18.95■□□□□ 0.62
NEAT1_3.1-201ENST00000613347 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms