RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
SORT1-209ENST00000538502 MYT1Q01538 1121 aa11.14□□□□□ -0.63
SORT1-209ENST00000538502 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
SORT1-209ENST00000538502 SUPT5HO00267 1087 aaKnown RBP10.84□□□□□ -0.67
SORT1-209ENST00000538502 NISCHQ9Y2I1 1504 aa10.82□□□□□ -0.68
SORT1-209ENST00000538502 CCER1Q8TC90 406 aaPredicted RBP10.8□□□□□ -0.68
SORT1-209ENST00000538502 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
SORT1-209ENST00000538502 CENPBP07199 599 aaPredicted RBP10.79□□□□□ -0.68
SORT1-209ENST00000538502 ERICH6Q7L0X2 663 aa10.73□□□□□ -0.69
SORT1-209ENST00000538502 APLP2Q06481 763 aa10.62□□□□□ -0.71
SORT1-209ENST00000538502 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
SORT1-209ENST00000538502 SHROOM4Q9ULL8 1493 aa10.5□□□□□ -0.73
SORT1-209ENST00000538502 NEFLP07196 543 aa10.45□□□□□ -0.74
SORT1-209ENST00000538502 FAM9AQ8IZU1 332 aaPredicted RBP10.38□□□□□ -0.75
SORT1-209ENST00000538502 YTHDC1Q96MU7 727 aaKnown RBP10.36□□□□□ -0.75
SORT1-209ENST00000538502 EHMT2Q96KQ7 1210 aa10.32□□□□□ -0.76
SORT1-209ENST00000538502 HRCP23327 699 aa10.25□□□□□ -0.77
SORT1-209ENST00000538502 TTBK1Q5TCY1 1321 aaPredicted RBP10.24□□□□□ -0.77
SORT1-209ENST00000538502 TRIM26Q12899 539 aaPredicted RBP10.22□□□□□ -0.77
SORT1-209ENST00000538502 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
SORT1-209ENST00000538502 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
SORT1-209ENST00000538502 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
SORT1-209ENST00000538502 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
SORT1-209ENST00000538502 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
SORT1-209ENST00000538502 DIEXFQ68CQ4 756 aaKnown RBP9.9□□□□□ -0.82
SORT1-209ENST00000538502 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
SORT1-209ENST00000538502 CLSPNQ9HAW4 1339 aa9.88□□□□□ -0.83
SORT1-209ENST00000538502 RANGAP1P46060 587 aaPredicted RBP9.86□□□□□ -0.83
SORT1-209ENST00000538502 MYT1LQ9UL68 1186 aa9.84□□□□□ -0.83
SORT1-209ENST00000538502 CDK11AQ9UQ88 783 aaPredicted RBP9.81□□□□□ -0.84
SORT1-209ENST00000538502 GTF3C3Q9Y5Q9 886 aa9.78□□□□□ -0.84
SORT1-209ENST00000538502 CHIC1Q5VXU3 224 aa9.76□□□□□ -0.85
SORT1-209ENST00000538502 GLIPR1L2Q4G1C9 344 aa9.73□□□□□ -0.85
SORT1-209ENST00000538502 PPARGC1BQ86YN6 1023 aaKnown RBP9.73□□□□□ -0.85
SORT1-209ENST00000538502 ACIN1Q9UKV3 1341 aaKnown RBP9.73□□□□□ -0.85
SORT1-209ENST00000538502 HNRNPUL2Q1KMD3 747 aaKnown RBP9.68□□□□□ -0.86
SORT1-209ENST00000538502 ANP32CO43423 234 aa9.68□□□□□ -0.86
SORT1-209ENST00000538502 ANP32AP39687 249 aaKnown RBP9.67□□□□□ -0.86
SORT1-209ENST00000538502 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
SORT1-209ENST00000538502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.65□□□□□ -0.87
SORT1-209ENST00000538502 LOC105371045A0A1W2PR82 267 aa9.64□□□□□ -0.87
SORT1-209ENST00000538502 ITGAEP38570 1179 aa9.63□□□□□ -0.87
SORT1-209ENST00000538502 ANP32BQ92688 251 aaKnown RBP9.57□□□□□ -0.88
SORT1-209ENST00000538502 ZBTB47Q9UFB7 747 aaPredicted RBP9.57□□□□□ -0.88
SORT1-209ENST00000538502 BCANQ96GW7 911 aa9.56□□□□□ -0.88
SORT1-209ENST00000538502 DCAF1Q9Y4B6 1507 aa9.53□□□□□ -0.88
SORT1-209ENST00000538502 EIF5BO60841 1220 aaKnown RBP9.49□□□□□ -0.89
SORT1-209ENST00000538502 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
SORT1-209ENST00000538502 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
SORT1-209ENST00000538502 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
SORT1-209ENST00000538502 SLC4A1APQ9BWU0 796 aaKnown RBP9.45□□□□□ -0.9
SORT1-209ENST00000538502 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
SORT1-209ENST00000538502 UPF2Q9HAU5 1272 aaKnown RBP9.44□□□□□ -0.9
SORT1-209ENST00000538502 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
SORT1-209ENST00000538502 FKBP8Q14318 412 aa9.41□□□□□ -0.9
SORT1-209ENST00000538502 ANP32EQ9BTT0 268 aa9.4□□□□□ -0.91
SORT1-209ENST00000538502 NEFMP07197 916 aa9.38□□□□□ -0.91
SORT1-209ENST00000538502 NPM2Q86SE8 214 aaKnown RBP9.37□□□□□ -0.91
SORT1-209ENST00000538502 DDRGK1Q96HY6 314 aa9.37□□□□□ -0.91
SORT1-209ENST00000538502 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
SORT1-209ENST00000538502 HSP90AA1P07900 732 aaKnown RBP9.34□□□□□ -0.91
SORT1-209ENST00000538502 SCAF1Q9H7N4 1312 aaKnown RBP9.33□□□□□ -0.92
SORT1-209ENST00000538502 TNNT2P45379 298 aaPredicted RBP9.32□□□□□ -0.92
SORT1-209ENST00000538502 CCDC136Q96JN2 1154 aa9.29□□□□□ -0.92
SORT1-209ENST00000538502 CCDC180Q9P1Z9 1646 aa9.29□□□□□ -0.92
SORT1-209ENST00000538502 TONSLQ96HA7 1378 aa9.29□□□□□ -0.92
SORT1-209ENST00000538502 HNRNPUQ00839 825 aaKnown RBP eCLIP9.28□□□□□ -0.92
SORT1-209ENST00000538502 NBR1Q14596 966 aa9.28□□□□□ -0.92
SORT1-209ENST00000538502 BECN1Q14457 450 aa9.27□□□□□ -0.92
SORT1-209ENST00000538502 PPM1GO15355 546 aaPredicted RBP9.26□□□□□ -0.93
SORT1-209ENST00000538502 ERICH6BQ5W0A0 696 aa9.26□□□□□ -0.93
SORT1-209ENST00000538502 ZNF326Q5BKZ1 582 aaKnown RBP9.26□□□□□ -0.93
SORT1-209ENST00000538502 TRIM44Q96DX7 344 aaPredicted RBP9.25□□□□□ -0.93
SORT1-209ENST00000538502 CSRNP3Q8WYN3 585 aa9.23□□□□□ -0.93
SORT1-209ENST00000538502 GOLGA6L22H0YM25 854 aa9.21□□□□□ -0.94
SORT1-209ENST00000538502 NCLP19338 710 aaKnown RBP9.18□□□□□ -0.94
SORT1-209ENST00000538502 DDX10Q13206 875 aaKnown RBP9.17□□□□□ -0.94
SORT1-209ENST00000538502 TMC1Q8TDI8 760 aa9.17□□□□□ -0.94
SORT1-209ENST00000538502 FAM9BQ8IZU0 186 aa9.17□□□□□ -0.94
SORT1-209ENST00000538502 MIER1Q8N108 512 aa9.14□□□□□ -0.95
SORT1-209ENST00000538502 WDR43Q15061 677 aaKnown RBP eCLIP9.14□□□□□ -0.95
SORT1-209ENST00000538502 MYH16Q9H6N6 1097 aa9.13□□□□□ -0.95
SORT1-209ENST00000538502 MRS2Q9HD23 443 aa9.13□□□□□ -0.95
SORT1-209ENST00000538502 NOP58Q9Y2X3 529 aaKnown RBP9.13□□□□□ -0.95
SORT1-209ENST00000538502 L1TD1Q5T7N2 865 aaKnown RBP9.11□□□□□ -0.95
SORT1-209ENST00000538502 PPP4R2Q9NY27 417 aa9.11□□□□□ -0.95
SORT1-209ENST00000538502 BCL11AQ9H165 835 aa9.1□□□□□ -0.95
SORT1-209ENST00000538502 NAP1L5Q96NT1 182 aaPredicted RBP9.1□□□□□ -0.95
SORT1-209ENST00000538502 SLC24A1O60721 1099 aa9.09□□□□□ -0.95
SORT1-209ENST00000538502 EEA1Q15075 1411 aa9.08□□□□□ -0.96
SORT1-209ENST00000538502 CDK11BP21127 795 aaKnown RBP9.08□□□□□ -0.96
SORT1-209ENST00000538502 PTMAP06454 111 aaKnown RBP9.07□□□□□ -0.96
SORT1-209ENST00000538502 EIF4G2P78344 907 aaKnown RBP eCLIP9.07□□□□□ -0.96
SORT1-209ENST00000538502 PTMSP20962 102 aa9.06□□□□□ -0.96
SORT1-209ENST00000538502 CASC1Q6TDU7 716 aa9.06□□□□□ -0.96
SORT1-209ENST00000538502 ARXQ96QS3 562 aa9.05□□□□□ -0.96
SORT1-209ENST00000538502 GOLGA6L6A8MZA4 724 aa9.05□□□□□ -0.96
SORT1-209ENST00000538502 DNTTIP2Q5QJE6 756 aaKnown RBP9.04□□□□□ -0.96
SORT1-209ENST00000538502 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
SORT1-209ENST00000538502 CHMP4BQ9H444 224 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms