RNA–Protein interactions for RNA: ENST00000587961.1

AC079466.1-201, humanhuman

TSL 2 BASIC

Gene AC079466.1, Length 4,453 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079466.1-201ENST00000587961 NISCHQ9Y2I1 1504 aa16.57■□□□□ 0.24
AC079466.1-201ENST00000587961 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
AC079466.1-201ENST00000587961 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
AC079466.1-201ENST00000587961 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
AC079466.1-201ENST00000587961 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
AC079466.1-201ENST00000587961 FAM9AQ8IZU1 332 aaPredicted RBP14.61□□□□□ -0.07
AC079466.1-201ENST00000587961 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
AC079466.1-201ENST00000587961 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
AC079466.1-201ENST00000587961 TTBK1Q5TCY1 1321 aaPredicted RBP14.31□□□□□ -0.12
AC079466.1-201ENST00000587961 APLP2Q06481 763 aa14.28□□□□□ -0.12
AC079466.1-201ENST00000587961 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.12
AC079466.1-201ENST00000587961 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
AC079466.1-201ENST00000587961 ZEB1P37275 1124 aaPredicted RBP14.12□□□□□ -0.15
AC079466.1-201ENST00000587961 RANGAP1P46060 587 aaPredicted RBP14.11□□□□□ -0.15
AC079466.1-201ENST00000587961 UBTFP17480 764 aaKnown RBP14.09□□□□□ -0.15
AC079466.1-201ENST00000587961 CCER1Q8TC90 406 aaPredicted RBP14.08□□□□□ -0.16
AC079466.1-201ENST00000587961 PPARGC1BQ86YN6 1023 aaKnown RBP14.05□□□□□ -0.16
AC079466.1-201ENST00000587961 HRCP23327 699 aa14.04□□□□□ -0.16
AC079466.1-201ENST00000587961 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
AC079466.1-201ENST00000587961 ABCC9O60706 1549 aa13.87□□□□□ -0.19
AC079466.1-201ENST00000587961 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
AC079466.1-201ENST00000587961 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
AC079466.1-201ENST00000587961 ATP1B4Q9UN42 357 aaPredicted RBP13.83□□□□□ -0.2
AC079466.1-201ENST00000587961 ZCCHC6Q5VYS8 1495 aaKnown RBP13.81□□□□□ -0.2
AC079466.1-201ENST00000587961 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
AC079466.1-201ENST00000587961 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
AC079466.1-201ENST00000587961 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
AC079466.1-201ENST00000587961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
AC079466.1-201ENST00000587961 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
AC079466.1-201ENST00000587961 ITGAEP38570 1179 aa13.58□□□□□ -0.24
AC079466.1-201ENST00000587961 SCRIBQ14160 1630 aa13.52□□□□□ -0.25
AC079466.1-201ENST00000587961 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
AC079466.1-201ENST00000587961 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
AC079466.1-201ENST00000587961 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
AC079466.1-201ENST00000587961 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
AC079466.1-201ENST00000587961 NEFLP07196 543 aa13.37□□□□□ -0.27
AC079466.1-201ENST00000587961 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
AC079466.1-201ENST00000587961 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
AC079466.1-201ENST00000587961 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
AC079466.1-201ENST00000587961 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
AC079466.1-201ENST00000587961 POLR3GLQ9BT43 218 aa13.18□□□□□ -0.3
AC079466.1-201ENST00000587961 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
AC079466.1-201ENST00000587961 GTF3C3Q9Y5Q9 886 aa13.14□□□□□ -0.31
AC079466.1-201ENST00000587961 P3H3Q8IVL6 736 aa13.13□□□□□ -0.31
AC079466.1-201ENST00000587961 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
AC079466.1-201ENST00000587961 TRIM52Q96A61 297 aa13.08□□□□□ -0.32
AC079466.1-201ENST00000587961 NACADO15069 1562 aa13.08□□□□□ -0.32
AC079466.1-201ENST00000587961 RB1CC1Q8TDY2 1594 aa13.08□□□□□ -0.32
AC079466.1-201ENST00000587961 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
AC079466.1-201ENST00000587961 ACIN1Q9UKV3 1341 aaKnown RBP13.05□□□□□ -0.32
AC079466.1-201ENST00000587961 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
AC079466.1-201ENST00000587961 MYT1Q01538 1121 aa13.02□□□□□ -0.33
AC079466.1-201ENST00000587961 CEP162Q5TB80 1403 aa12.98□□□□□ -0.33
AC079466.1-201ENST00000587961 CLIP1P30622 1438 aa12.98□□□□□ -0.33
AC079466.1-201ENST00000587961 ARID3CA6NKF2 412 aa12.97□□□□□ -0.33
AC079466.1-201ENST00000587961 EEA1Q15075 1411 aa12.95□□□□□ -0.34
AC079466.1-201ENST00000587961 ANP32CO43423 234 aa12.95□□□□□ -0.34
AC079466.1-201ENST00000587961 FBLN2P98095 1184 aa12.95□□□□□ -0.34
AC079466.1-201ENST00000587961 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
AC079466.1-201ENST00000587961 BCANQ96GW7 911 aa12.93□□□□□ -0.34
AC079466.1-201ENST00000587961 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
AC079466.1-201ENST00000587961 GOLGA3Q08378 1498 aa12.92□□□□□ -0.34
AC079466.1-201ENST00000587961 ZNF326Q5BKZ1 582 aaKnown RBP12.91□□□□□ -0.34
AC079466.1-201ENST00000587961 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
AC079466.1-201ENST00000587961 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
AC079466.1-201ENST00000587961 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
AC079466.1-201ENST00000587961 SOGA1O94964 1423 aa12.82□□□□□ -0.36
AC079466.1-201ENST00000587961 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
AC079466.1-201ENST00000587961 CEP164Q9UPV0 1460 aa12.81□□□□□ -0.36
AC079466.1-201ENST00000587961 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
AC079466.1-201ENST00000587961 MIER1Q8N108 512 aa12.8□□□□□ -0.36
AC079466.1-201ENST00000587961 ZNF777Q9ULD5 760 aaPredicted RBP12.8□□□□□ -0.36
AC079466.1-201ENST00000587961 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
AC079466.1-201ENST00000587961 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
AC079466.1-201ENST00000587961 CCDC88BA6NC98 1476 aa12.76□□□□□ -0.37
AC079466.1-201ENST00000587961 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
AC079466.1-201ENST00000587961 CHIC2Q9UKJ5 165 aa12.76□□□□□ -0.37
AC079466.1-201ENST00000587961 ABCC8Q09428 1581 aa12.75□□□□□ -0.37
AC079466.1-201ENST00000587961 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
AC079466.1-201ENST00000587961 MTUS2Q5JR59 1369 aa12.74□□□□□ -0.37
AC079466.1-201ENST00000587961 DAXXQ9UER7 740 aaPredicted RBP12.73□□□□□ -0.37
AC079466.1-201ENST00000587961 WIZO95785 1651 aa12.7□□□□□ -0.38
AC079466.1-201ENST00000587961 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
AC079466.1-201ENST00000587961 FKBP8Q14318 412 aa12.68□□□□□ -0.38
AC079466.1-201ENST00000587961 HNRNPUQ00839 825 aaKnown RBP eCLIP12.66□□□□□ -0.386e-8■□□□□ 9.2
AC079466.1-201ENST00000587961 CLSPNQ9HAW4 1339 aa12.66□□□□□ -0.38
AC079466.1-201ENST00000587961 RRP7BPQ9NSQ0 103 aa12.63□□□□□ -0.39
AC079466.1-201ENST00000587961 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
AC079466.1-201ENST00000587961 VPS8Q8N3P4 1428 aa12.61□□□□□ -0.39
AC079466.1-201ENST00000587961 FAM9BQ8IZU0 186 aa12.6□□□□□ -0.39
AC079466.1-201ENST00000587961 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
AC079466.1-201ENST00000587961 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
AC079466.1-201ENST00000587961 CUX2O14529 1486 aa12.57□□□□□ -0.4
AC079466.1-201ENST00000587961 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
AC079466.1-201ENST00000587961 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
AC079466.1-201ENST00000587961 SIN3AQ96ST3 1273 aa12.56□□□□□ -0.4
AC079466.1-201ENST00000587961 KANK4Q5T7N3 995 aaPredicted RBP12.56□□□□□ -0.4
AC079466.1-201ENST00000587961 TSPY4P0CV99 314 aa12.54□□□□□ -0.4
AC079466.1-201ENST00000587961 TSPY10P0CW01 314 aa12.54□□□□□ -0.4
AC079466.1-201ENST00000587961 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms