RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 AEBP2Q6ZN18 517 aaPredicted RBP38.59■■■■□ 3.77
MALAT1-217ENST00000620902 CHIC1Q5VXU3 224 aa37.52■■■■□ 3.6
MALAT1-217ENST00000620902 PHF23Q9BUL5 403 aaPredicted RBP32.92■■■□□ 2.86
MALAT1-217ENST00000620902 SENP3Q9H4L4 574 aaPredicted RBP32.9■■■□□ 2.86
MALAT1-217ENST00000620902 FOXD1Q16676 465 aa30.48■■■□□ 2.47
MALAT1-217ENST00000620902 PLPPR3Q6T4P5 718 aa30.4■■■□□ 2.46
MALAT1-217ENST00000620902 PPP6R1Q9UPN7 881 aa29.11■■■□□ 2.25
MALAT1-217ENST00000620902 ADRA2BP18089 450 aa29.08■■■□□ 2.25
MALAT1-217ENST00000620902 PIAS4Q8N2W9 510 aaPredicted RBP28.71■■■□□ 2.19
MALAT1-217ENST00000620902 MSH5O43196 834 aa28.31■■■□□ 2.12
MALAT1-217ENST00000620902 SCAF1Q9H7N4 1312 aaKnown RBP26.76■■□□□ 1.87
MALAT1-217ENST00000620902 PPP4R3CPQ6ZMV5 832 aa26.71■■□□□ 1.87
MALAT1-217ENST00000620902 MAPK8IP2Q13387 824 aaPredicted RBP26.44■■□□□ 1.82
MALAT1-217ENST00000620902 DMRT2Q9Y5R5 561 aa26.2■■□□□ 1.78
MALAT1-217ENST00000620902 POTEDQ86YR6 584 aa26.12■■□□□ 1.77
MALAT1-217ENST00000620902 CNKSR2Q8WXI2 1034 aa26.07■■□□□ 1.76
MALAT1-217ENST00000620902 NCBP3Q53F19 620 aaKnown RBP26.03■■□□□ 1.76
MALAT1-217ENST00000620902 KCNA4P22459 653 aa25.77■■□□□ 1.72
MALAT1-217ENST00000620902 RNF216Q9NWF9 866 aaPredicted RBP25.62■■□□□ 1.69
MALAT1-217ENST00000620902 HOXD11P31277 338 aaPredicted RBP25.57■■□□□ 1.68
MALAT1-217ENST00000620902 NPM3O75607 178 aaKnown RBP25.54■■□□□ 1.68
MALAT1-217ENST00000620902 DCAF8L1A6NGE4 600 aa25.03■■□□□ 1.6
MALAT1-217ENST00000620902 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
MALAT1-217ENST00000620902 SLC4A1APQ9BWU0 796 aaKnown RBP24.54■■□□□ 1.52
MALAT1-217ENST00000620902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.36■■□□□ 1.49
MALAT1-217ENST00000620902 RNF39Q9H2S5 420 aa24.19■■□□□ 1.46
MALAT1-217ENST00000620902 SLC4A2P04920 1241 aa24.17■■□□□ 1.46
MALAT1-217ENST00000620902 C1QBPQ07021 282 aaKnown RBP23.94■■□□□ 1.42
MALAT1-217ENST00000620902 U3KPZ7 1027 aaPredicted RBP23.9■■□□□ 1.42
MALAT1-217ENST00000620902 FOXD4L1Q9NU39 408 aa23.84■■□□□ 1.41
MALAT1-217ENST00000620902 CACNB1Q02641 598 aaPredicted RBP23.74■■□□□ 1.39
MALAT1-217ENST00000620902 ZBTB22O15209 634 aa23.67■■□□□ 1.38
MALAT1-217ENST00000620902 MYCNP04198 464 aaPredicted RBP23.66■■□□□ 1.38
MALAT1-217ENST00000620902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.64■■□□□ 1.37
MALAT1-217ENST00000620902 HNRNPUL2Q1KMD3 747 aaKnown RBP23.64■■□□□ 1.37
MALAT1-217ENST00000620902 SAMD1Q6SPF0 538 aaPredicted RBP23.51■■□□□ 1.35
MALAT1-217ENST00000620902 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
MALAT1-217ENST00000620902 APLP2Q06481 763 aa23.47■■□□□ 1.35
MALAT1-217ENST00000620902 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
MALAT1-217ENST00000620902 SPINK5Q9NQ38 1064 aaPredicted RBP23.27■■□□□ 1.32
MALAT1-217ENST00000620902 CAPN15O75808 1086 aa23.24■■□□□ 1.31
MALAT1-217ENST00000620902 ZNF219Q9P2Y4 722 aaPredicted RBP23.12■■□□□ 1.29
MALAT1-217ENST00000620902 ATXN8OSP0DMR3 200 aa23.11■■□□□ 1.29
MALAT1-217ENST00000620902 TRHP20396 242 aaPredicted RBP23.06■■□□□ 1.28
MALAT1-217ENST00000620902 ATF5Q9Y2D1 282 aaPredicted RBP22.94■■□□□ 1.26
MALAT1-217ENST00000620902 DSG3P32926 999 aa22.91■■□□□ 1.26
MALAT1-217ENST00000620902 ABCB7O75027 752 aa22.72■■□□□ 1.23
MALAT1-217ENST00000620902 POLA2Q14181 598 aa22.65■■□□□ 1.22
MALAT1-217ENST00000620902 ZBTB12Q9Y330 459 aaPredicted RBP22.35■■□□□ 1.17
MALAT1-217ENST00000620902 FBLN2P98095 1184 aa22.12■■□□□ 1.13
MALAT1-217ENST00000620902 MKRN4PQ13434 485 aaPredicted RBP21.96■■□□□ 1.11
MALAT1-217ENST00000620902 RBM42Q9BTD8 480 aaKnown RBP21.92■■□□□ 1.1
MALAT1-217ENST00000620902 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
MALAT1-217ENST00000620902 SPDYE2BA6NHP3 402 aa21.69■■□□□ 1.06
MALAT1-217ENST00000620902 SPDYE6P0CI01 402 aa21.69■■□□□ 1.06
MALAT1-217ENST00000620902 SPDYE2Q495Y8 402 aa21.69■■□□□ 1.06
MALAT1-217ENST00000620902 AKT1S1Q96B36 256 aa21.58■■□□□ 1.05
MALAT1-217ENST00000620902 ZNF692Q9BU19 519 aaPredicted RBP21.54■■□□□ 1.04
MALAT1-217ENST00000620902 SSUH2Q9Y2M2 353 aa21.46■■□□□ 1.03
MALAT1-217ENST00000620902 SPDYE4A6NLX3 237 aa21.4■■□□□ 1.02
MALAT1-217ENST00000620902 REM2Q8IYK8 340 aaPredicted RBP21.32■■□□□ 1
MALAT1-217ENST00000620902 ABCC9O60706 1549 aa21.32■■□□□ 1
MALAT1-217ENST00000620902 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
MALAT1-217ENST00000620902 PABPN1Q86U42 306 aaKnown RBP eCLIP21.22■□□□□ 0.99
MALAT1-217ENST00000620902 FKBP8Q14318 412 aa21.15■□□□□ 0.98
MALAT1-217ENST00000620902 SPDYE1Q8NFV5 336 aaPredicted RBP21.11■□□□□ 0.97
MALAT1-217ENST00000620902 PITPNM1O00562 1244 aa21.06■□□□□ 0.96
MALAT1-217ENST00000620902 CHRDL2Q6WN34 429 aa21.04■□□□□ 0.96
MALAT1-217ENST00000620902 PROM2Q8N271 834 aa21.02■□□□□ 0.96
MALAT1-217ENST00000620902 CLEC11AQ9Y240 323 aa20.96■□□□□ 0.95
MALAT1-217ENST00000620902 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
MALAT1-217ENST00000620902 PRR29P0C7W0 189 aa20.79■□□□□ 0.92
MALAT1-217ENST00000620902 FXR2P51116 673 aaKnown RBP eCLIP20.75■□□□□ 0.91
MALAT1-217ENST00000620902 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
MALAT1-217ENST00000620902 PIP4P2Q8N4L2 257 aa20.7■□□□□ 0.9
MALAT1-217ENST00000620902 POTEHQ6S545 545 aa20.66■□□□□ 0.9
MALAT1-217ENST00000620902 FBXO3Q9UK99 471 aa20.58■□□□□ 0.89
MALAT1-217ENST00000620902 PRKAR2AP13861 404 aaKnown RBP20.54■□□□□ 0.88
MALAT1-217ENST00000620902 CHADLQ6NUI6 762 aa20.44■□□□□ 0.86
MALAT1-217ENST00000620902 CREBZFQ9NS37 354 aa20.42■□□□□ 0.86
MALAT1-217ENST00000620902 MIER1Q8N108 512 aa20.34■□□□□ 0.85
MALAT1-217ENST00000620902 PLEKHG5O94827 1062 aa20.33■□□□□ 0.85
MALAT1-217ENST00000620902 FARP1Q9Y4F1 1045 aaPredicted RBP20.29■□□□□ 0.84
MALAT1-217ENST00000620902 PLCD3Q8N3E9 789 aa20.28■□□□□ 0.84
MALAT1-217ENST00000620902 VASPP50552 380 aaPredicted RBP20.22■□□□□ 0.83
MALAT1-217ENST00000620902 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
MALAT1-217ENST00000620902 MNX1P50219 401 aaPredicted RBP20.17■□□□□ 0.82
MALAT1-217ENST00000620902 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
MALAT1-217ENST00000620902 HAX1O00165 279 aa20.13■□□□□ 0.81
MALAT1-217ENST00000620902 C19orf67A6NJJ6 358 aa20.05■□□□□ 0.8
MALAT1-217ENST00000620902 KLHL34Q8N239 644 aa19.95■□□□□ 0.78
MALAT1-217ENST00000620902 CD44P16070 742 aaKnown RBP19.94■□□□□ 0.78
MALAT1-217ENST00000620902 IFNLR1Q8IU57 520 aaPredicted RBP19.9■□□□□ 0.78
MALAT1-217ENST00000620902 PAK3O75914 559 aaPredicted RBP19.88■□□□□ 0.77
MALAT1-217ENST00000620902 EVX2Q03828 476 aa19.86■□□□□ 0.77
MALAT1-217ENST00000620902 NUBP1P53384 320 aa19.82■□□□□ 0.76
MALAT1-217ENST00000620902 CCDC180Q9P1Z9 1646 aa19.82■□□□□ 0.76
MALAT1-217ENST00000620902 ZRANB1Q9UGI0 708 aa19.79■□□□□ 0.76
MALAT1-217ENST00000620902 RASEFQ8IZ41 740 aa19.77■□□□□ 0.76
MALAT1-217ENST00000620902 SP7Q8TDD2 431 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms