RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
MALAT1-210ENST00000617489 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
MALAT1-210ENST00000617489 SENP3Q9H4L4 574 aaPredicted RBP21.87■■□□□ 1.09
MALAT1-210ENST00000617489 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
MALAT1-210ENST00000617489 FOXD1Q16676 465 aa20.36■□□□□ 0.85
MALAT1-210ENST00000617489 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
MALAT1-210ENST00000617489 MSH5O43196 834 aa19.12■□□□□ 0.65
MALAT1-210ENST00000617489 PIAS4Q8N2W9 510 aaPredicted RBP19.06■□□□□ 0.64
MALAT1-210ENST00000617489 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
MALAT1-210ENST00000617489 ADRA2BP18089 450 aa18.95■□□□□ 0.62
MALAT1-210ENST00000617489 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
MALAT1-210ENST00000617489 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
MALAT1-210ENST00000617489 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
MALAT1-210ENST00000617489 DMRT2Q9Y5R5 561 aa17.29■□□□□ 0.36
MALAT1-210ENST00000617489 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
MALAT1-210ENST00000617489 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
MALAT1-210ENST00000617489 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
MALAT1-210ENST00000617489 HOXD11P31277 338 aaPredicted RBP16.6■□□□□ 0.25
MALAT1-210ENST00000617489 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
MALAT1-210ENST00000617489 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
MALAT1-210ENST00000617489 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
MALAT1-210ENST00000617489 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
MALAT1-210ENST00000617489 C1QBPQ07021 282 aaKnown RBP16.06■□□□□ 0.16
MALAT1-210ENST00000617489 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
MALAT1-210ENST00000617489 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
MALAT1-210ENST00000617489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
MALAT1-210ENST00000617489 KCNA4P22459 653 aa15.64■□□□□ 0.09
MALAT1-210ENST00000617489 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
MALAT1-210ENST00000617489 CAPN15O75808 1086 aa15.39■□□□□ 0.05
MALAT1-210ENST00000617489 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
MALAT1-210ENST00000617489 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
MALAT1-210ENST00000617489 DSG3P32926 999 aa15.23■□□□□ 0.03
MALAT1-210ENST00000617489 APLP2Q06481 763 aa15.16■□□□□ 0.02
MALAT1-210ENST00000617489 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
MALAT1-210ENST00000617489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.11■□□□□ 0.01
MALAT1-210ENST00000617489 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
MALAT1-210ENST00000617489 ZNF219Q9P2Y4 722 aaPredicted RBP15.04■□□□□ -0
MALAT1-210ENST00000617489 ABCB7O75027 752 aa15□□□□□ -0.01
MALAT1-210ENST00000617489 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
MALAT1-210ENST00000617489 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
MALAT1-210ENST00000617489 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
MALAT1-210ENST00000617489 POTEHQ6S545 545 aa14.73□□□□□ -0.05
MALAT1-210ENST00000617489 POLA2Q14181 598 aa14.66□□□□□ -0.06
MALAT1-210ENST00000617489 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
MALAT1-210ENST00000617489 RBM42Q9BTD8 480 aaKnown RBP14.58□□□□□ -0.08
MALAT1-210ENST00000617489 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
MALAT1-210ENST00000617489 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
MALAT1-210ENST00000617489 ZBTB22O15209 634 aa14.32□□□□□ -0.12
MALAT1-210ENST00000617489 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.13
MALAT1-210ENST00000617489 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
MALAT1-210ENST00000617489 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
MALAT1-210ENST00000617489 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
MALAT1-210ENST00000617489 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
MALAT1-210ENST00000617489 FBLN2P98095 1184 aa14□□□□□ -0.17
MALAT1-210ENST00000617489 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
MALAT1-210ENST00000617489 PIP4P2Q8N4L2 257 aa13.9□□□□□ -0.18
MALAT1-210ENST00000617489 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
MALAT1-210ENST00000617489 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
MALAT1-210ENST00000617489 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
MALAT1-210ENST00000617489 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
MALAT1-210ENST00000617489 HAX1O00165 279 aa13.77□□□□□ -0.21
MALAT1-210ENST00000617489 MKRN4PQ13434 485 aaPredicted RBP13.77□□□□□ -0.21
MALAT1-210ENST00000617489 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
MALAT1-210ENST00000617489 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
MALAT1-210ENST00000617489 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
MALAT1-210ENST00000617489 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
MALAT1-210ENST00000617489 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
MALAT1-210ENST00000617489 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
MALAT1-210ENST00000617489 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
MALAT1-210ENST00000617489 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
MALAT1-210ENST00000617489 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
MALAT1-210ENST00000617489 EVX2Q03828 476 aa13.48□□□□□ -0.25
MALAT1-210ENST00000617489 PRR29P0C7W0 189 aa13.47□□□□□ -0.25
MALAT1-210ENST00000617489 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
MALAT1-210ENST00000617489 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
MALAT1-210ENST00000617489 GABBR2O75899 941 aa13.21□□□□□ -0.29
MALAT1-210ENST00000617489 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
MALAT1-210ENST00000617489 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
MALAT1-210ENST00000617489 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
MALAT1-210ENST00000617489 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
MALAT1-210ENST00000617489 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
MALAT1-210ENST00000617489 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
MALAT1-210ENST00000617489 CLCN6P51797 869 aa12.97□□□□□ -0.33
MALAT1-210ENST00000617489 LHX8Q68G74 356 aa12.94□□□□□ -0.34
MALAT1-210ENST00000617489 DCBLD2Q96PD2 775 aa12.91□□□□□ -0.34
MALAT1-210ENST00000617489 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
MALAT1-210ENST00000617489 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
MALAT1-210ENST00000617489 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
MALAT1-210ENST00000617489 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
MALAT1-210ENST00000617489 GALR2O43603 387 aaPredicted RBP12.77□□□□□ -0.37
MALAT1-210ENST00000617489 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
MALAT1-210ENST00000617489 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
MALAT1-210ENST00000617489 PROM2Q8N271 834 aa12.69□□□□□ -0.38
MALAT1-210ENST00000617489 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
MALAT1-210ENST00000617489 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
MALAT1-210ENST00000617489 MIER1Q8N108 512 aa12.64□□□□□ -0.39
MALAT1-210ENST00000617489 MS4A3Q96HJ5 214 aa12.57□□□□□ -0.4
MALAT1-210ENST00000617489 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
MALAT1-210ENST00000617489 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
MALAT1-210ENST00000617489 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms