RNA–Protein interactions for RNA: ENST00000361227.2

MT-ND3-201, Transcript of mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3, humanhuman

APPRIS P1 BASIC

Gene MT-ND3, Length 346 nt, Biotype protein coding, Subcellular localisation Cytosol, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3-201ENST00000361227 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
MT-ND3-201ENST00000361227 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
MT-ND3-201ENST00000361227 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
MT-ND3-201ENST00000361227 SENP3Q9H4L4 574 aaPredicted RBP15.14■□□□□ 0.01
MT-ND3-201ENST00000361227 PLPPR3Q6T4P5 718 aa14.46□□□□□ -0.09
MT-ND3-201ENST00000361227 FOXD1Q16676 465 aa14.03□□□□□ -0.16
MT-ND3-201ENST00000361227 ADRA2BP18089 450 aa13.69□□□□□ -0.22
MT-ND3-201ENST00000361227 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
MT-ND3-201ENST00000361227 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
MT-ND3-201ENST00000361227 MSH5O43196 834 aa12.85□□□□□ -0.35
MT-ND3-201ENST00000361227 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.37
MT-ND3-201ENST00000361227 KCNA4P22459 653 aa12.72□□□□□ -0.37
MT-ND3-201ENST00000361227 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
MT-ND3-201ENST00000361227 NCBP3Q53F19 620 aaKnown RBP12.5□□□□□ -0.41
MT-ND3-201ENST00000361227 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
MT-ND3-201ENST00000361227 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
MT-ND3-201ENST00000361227 NPM3O75607 178 aaKnown RBP12.31□□□□□ -0.44
MT-ND3-201ENST00000361227 SLC4A1APQ9BWU0 796 aaKnown RBP12.16□□□□□ -0.46
MT-ND3-201ENST00000361227 DMRT2Q9Y5R5 561 aa12.11□□□□□ -0.47
MT-ND3-201ENST00000361227 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
MT-ND3-201ENST00000361227 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
MT-ND3-201ENST00000361227 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
MT-ND3-201ENST00000361227 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
MT-ND3-201ENST00000361227 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
MT-ND3-201ENST00000361227 ZBTB22O15209 634 aa11.7□□□□□ -0.54
MT-ND3-201ENST00000361227 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
MT-ND3-201ENST00000361227 FOXD4L1Q9NU39 408 aa11.63□□□□□ -0.55
MT-ND3-201ENST00000361227 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
MT-ND3-201ENST00000361227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.42□□□□□ -0.58
MT-ND3-201ENST00000361227 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
MT-ND3-201ENST00000361227 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
MT-ND3-201ENST00000361227 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
MT-ND3-201ENST00000361227 ATXN8OSP0DMR3 200 aa11.2□□□□□ -0.62
MT-ND3-201ENST00000361227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
MT-ND3-201ENST00000361227 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
MT-ND3-201ENST00000361227 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
MT-ND3-201ENST00000361227 ATF5Q9Y2D1 282 aaPredicted RBP11.07□□□□□ -0.64
MT-ND3-201ENST00000361227 RNF39Q9H2S5 420 aa11.03□□□□□ -0.64
MT-ND3-201ENST00000361227 APLP2Q06481 763 aa11□□□□□ -0.65
MT-ND3-201ENST00000361227 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
MT-ND3-201ENST00000361227 ZNF219Q9P2Y4 722 aaPredicted RBP10.88□□□□□ -0.67
MT-ND3-201ENST00000361227 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
MT-ND3-201ENST00000361227 TRHP20396 242 aaPredicted RBP10.85□□□□□ -0.67
MT-ND3-201ENST00000361227 CAPN15O75808 1086 aa10.83□□□□□ -0.68
MT-ND3-201ENST00000361227 POLA2Q14181 598 aa10.71□□□□□ -0.69
MT-ND3-201ENST00000361227 FKBP8Q14318 412 aa10.69□□□□□ -0.7
MT-ND3-201ENST00000361227 ABCB7O75027 752 aa10.64□□□□□ -0.71
MT-ND3-201ENST00000361227 CACNB1Q02641 598 aaPredicted RBP10.62□□□□□ -0.71
MT-ND3-201ENST00000361227 DSG3P32926 999 aa10.58□□□□□ -0.72
MT-ND3-201ENST00000361227 FBLN2P98095 1184 aa10.58□□□□□ -0.72
MT-ND3-201ENST00000361227 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
MT-ND3-201ENST00000361227 ZBTB12Q9Y330 459 aaPredicted RBP10.51□□□□□ -0.73
MT-ND3-201ENST00000361227 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.73
MT-ND3-201ENST00000361227 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
MT-ND3-201ENST00000361227 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
MT-ND3-201ENST00000361227 PROM2Q8N271 834 aa10.27□□□□□ -0.77
MT-ND3-201ENST00000361227 SPDYE2BA6NHP3 402 aa10.25□□□□□ -0.77
MT-ND3-201ENST00000361227 SPDYE6P0CI01 402 aa10.25□□□□□ -0.77
MT-ND3-201ENST00000361227 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
MT-ND3-201ENST00000361227 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
MT-ND3-201ENST00000361227 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
MT-ND3-201ENST00000361227 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
MT-ND3-201ENST00000361227 AMER1Q5JTC6 1135 aaPredicted RBP10.09□□□□□ -0.79
MT-ND3-201ENST00000361227 RTN4Q9NQC3 1192 aaKnown RBP10.09□□□□□ -0.79
MT-ND3-201ENST00000361227 VASPP50552 380 aaPredicted RBP10.08□□□□□ -0.8
MT-ND3-201ENST00000361227 RBM42Q9BTD8 480 aaKnown RBP10.07□□□□□ -0.8
MT-ND3-201ENST00000361227 STAG3Q9UJ98 1225 aa10.02□□□□□ -0.81
MT-ND3-201ENST00000361227 AKT1S1Q96B36 256 aa10□□□□□ -0.81
MT-ND3-201ENST00000361227 IFNLR1Q8IU57 520 aaPredicted RBP9.97□□□□□ -0.81
MT-ND3-201ENST00000361227 MIER1Q8N108 512 aa9.93□□□□□ -0.82
MT-ND3-201ENST00000361227 PLCD3Q8N3E9 789 aa9.92□□□□□ -0.82
MT-ND3-201ENST00000361227 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
MT-ND3-201ENST00000361227 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
MT-ND3-201ENST00000361227 SPDYE1Q8NFV5 336 aaPredicted RBP9.9□□□□□ -0.82
MT-ND3-201ENST00000361227 CLEC11AQ9Y240 323 aa9.89□□□□□ -0.83
MT-ND3-201ENST00000361227 PLEKHG5O94827 1062 aa9.85□□□□□ -0.83
MT-ND3-201ENST00000361227 PRR29P0C7W0 189 aa9.82□□□□□ -0.84
MT-ND3-201ENST00000361227 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
MT-ND3-201ENST00000361227 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
MT-ND3-201ENST00000361227 ZBTB47Q9UFB7 747 aaPredicted RBP9.78□□□□□ -0.84
MT-ND3-201ENST00000361227 PKD2Q13563 968 aa9.72□□□□□ -0.85
MT-ND3-201ENST00000361227 CREBZFQ9NS37 354 aa9.71□□□□□ -0.86
MT-ND3-201ENST00000361227 CIZ1Q9ULV3 898 aaPredicted RBP9.66□□□□□ -0.86
MT-ND3-201ENST00000361227 ECM2O94769 699 aaPredicted RBP9.63□□□□□ -0.87
MT-ND3-201ENST00000361227 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
MT-ND3-201ENST00000361227 DCAF8L2P0C7V8 631 aa9.62□□□□□ -0.87
MT-ND3-201ENST00000361227 NUBP1P53384 320 aa9.61□□□□□ -0.87
MT-ND3-201ENST00000361227 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
MT-ND3-201ENST00000361227 NPM1P06748 294 aaKnown RBP eCLIP9.58□□□□□ -0.88
MT-ND3-201ENST00000361227 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
MT-ND3-201ENST00000361227 GSE1Q14687 1217 aa9.57□□□□□ -0.88
MT-ND3-201ENST00000361227 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
MT-ND3-201ENST00000361227 PRKAR2AP13861 404 aaKnown RBP9.56□□□□□ -0.88
MT-ND3-201ENST00000361227 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
MT-ND3-201ENST00000361227 FAM212AQ96EL1 285 aa9.54□□□□□ -0.88
MT-ND3-201ENST00000361227 RASEFQ8IZ41 740 aa9.53□□□□□ -0.88
MT-ND3-201ENST00000361227 FARP1Q9Y4F1 1045 aaPredicted RBP9.53□□□□□ -0.88
MT-ND3-201ENST00000361227 RGL2O15211 777 aa9.52□□□□□ -0.89
MT-ND3-201ENST00000361227 TRIM41Q8WV44 630 aa9.52□□□□□ -0.89
MT-ND3-201ENST00000361227 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms