RNA–Protein interactions for RNA: ENST00000487117.1

HP1BP3-212, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

TSL 2

Gene HP1BP3, Length 1,598 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-212ENST00000487117 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
HP1BP3-212ENST00000487117 CHIC1Q5VXU3 224 aa28.4■■■□□ 2.14
HP1BP3-212ENST00000487117 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
HP1BP3-212ENST00000487117 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
HP1BP3-212ENST00000487117 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.3
HP1BP3-212ENST00000487117 FOXD1Q16676 465 aa22.63■■□□□ 1.21
HP1BP3-212ENST00000487117 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
HP1BP3-212ENST00000487117 ADRA2BP18089 450 aa21.98■■□□□ 1.11
HP1BP3-212ENST00000487117 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
HP1BP3-212ENST00000487117 MSH5O43196 834 aa20.73■□□□□ 0.91
HP1BP3-212ENST00000487117 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
HP1BP3-212ENST00000487117 POTEDQ86YR6 584 aa20.38■□□□□ 0.85
HP1BP3-212ENST00000487117 KCNA4P22459 653 aa20.29■□□□□ 0.84
HP1BP3-212ENST00000487117 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
HP1BP3-212ENST00000487117 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.78
HP1BP3-212ENST00000487117 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
HP1BP3-212ENST00000487117 CNKSR2Q8WXI2 1034 aa19.81■□□□□ 0.76
HP1BP3-212ENST00000487117 NPM3O75607 178 aaKnown RBP19.7■□□□□ 0.74
HP1BP3-212ENST00000487117 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
HP1BP3-212ENST00000487117 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
HP1BP3-212ENST00000487117 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
HP1BP3-212ENST00000487117 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
HP1BP3-212ENST00000487117 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
HP1BP3-212ENST00000487117 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
HP1BP3-212ENST00000487117 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
HP1BP3-212ENST00000487117 ZBTB22O15209 634 aa18.69■□□□□ 0.58
HP1BP3-212ENST00000487117 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
HP1BP3-212ENST00000487117 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
HP1BP3-212ENST00000487117 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
HP1BP3-212ENST00000487117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.521e-21■□□□□ 11.2
HP1BP3-212ENST00000487117 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
HP1BP3-212ENST00000487117 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
HP1BP3-212ENST00000487117 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
HP1BP3-212ENST00000487117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
HP1BP3-212ENST00000487117 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
HP1BP3-212ENST00000487117 SAMD1Q6SPF0 538 aaPredicted RBP17.84■□□□□ 0.45
HP1BP3-212ENST00000487117 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
HP1BP3-212ENST00000487117 CACNB1Q02641 598 aaPredicted RBP17.76■□□□□ 0.43
HP1BP3-212ENST00000487117 ATF5Q9Y2D1 282 aaPredicted RBP17.72■□□□□ 0.43
HP1BP3-212ENST00000487117 APLP2Q06481 763 aa17.62■□□□□ 0.41
HP1BP3-212ENST00000487117 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
HP1BP3-212ENST00000487117 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
HP1BP3-212ENST00000487117 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
HP1BP3-212ENST00000487117 CAPN15O75808 1086 aa17.36■□□□□ 0.37
HP1BP3-212ENST00000487117 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
HP1BP3-212ENST00000487117 POLA2Q14181 598 aa17.14■□□□□ 0.33
HP1BP3-212ENST00000487117 ABCB7O75027 752 aa17.08■□□□□ 0.32
HP1BP3-212ENST00000487117 DSG3P32926 999 aa17.04■□□□□ 0.32
HP1BP3-212ENST00000487117 MKRN4PQ13434 485 aaPredicted RBP16.96■□□□□ 0.31
HP1BP3-212ENST00000487117 FKBP8Q14318 412 aa16.94■□□□□ 0.3
HP1BP3-212ENST00000487117 FBLN2P98095 1184 aa16.89■□□□□ 0.3
HP1BP3-212ENST00000487117 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
HP1BP3-212ENST00000487117 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
HP1BP3-212ENST00000487117 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
HP1BP3-212ENST00000487117 PROM2Q8N271 834 aa16.47■□□□□ 0.23
HP1BP3-212ENST00000487117 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
HP1BP3-212ENST00000487117 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
HP1BP3-212ENST00000487117 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
HP1BP3-212ENST00000487117 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
HP1BP3-212ENST00000487117 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
HP1BP3-212ENST00000487117 FBXO3Q9UK99 471 aa16.24■□□□□ 0.19
HP1BP3-212ENST00000487117 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
HP1BP3-212ENST00000487117 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
HP1BP3-212ENST00000487117 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
HP1BP3-212ENST00000487117 VASPP50552 380 aaPredicted RBP16.04■□□□□ 0.16
HP1BP3-212ENST00000487117 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
HP1BP3-212ENST00000487117 REM2Q8IYK8 340 aaPredicted RBP15.93■□□□□ 0.14
HP1BP3-212ENST00000487117 POTEHQ6S545 545 aa15.92■□□□□ 0.14
HP1BP3-212ENST00000487117 SPDYE1Q8NFV5 336 aaPredicted RBP15.88■□□□□ 0.13
HP1BP3-212ENST00000487117 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
HP1BP3-212ENST00000487117 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
HP1BP3-212ENST00000487117 IFNLR1Q8IU57 520 aaPredicted RBP15.86■□□□□ 0.13
HP1BP3-212ENST00000487117 CLEC11AQ9Y240 323 aa15.79■□□□□ 0.12
HP1BP3-212ENST00000487117 PLCD3Q8N3E9 789 aa15.77■□□□□ 0.11
HP1BP3-212ENST00000487117 MIER1Q8N108 512 aa15.76■□□□□ 0.11
HP1BP3-212ENST00000487117 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
HP1BP3-212ENST00000487117 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
HP1BP3-212ENST00000487117 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
HP1BP3-212ENST00000487117 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
HP1BP3-212ENST00000487117 SPOCK2Q92563 424 aa15.61■□□□□ 0.09
HP1BP3-212ENST00000487117 CREBZFQ9NS37 354 aa15.59■□□□□ 0.09
HP1BP3-212ENST00000487117 ZBTB47Q9UFB7 747 aaPredicted RBP15.56■□□□□ 0.08
HP1BP3-212ENST00000487117 MNX1P50219 401 aaPredicted RBP15.47■□□□□ 0.07
HP1BP3-212ENST00000487117 PKD2Q13563 968 aa15.44■□□□□ 0.06
HP1BP3-212ENST00000487117 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
HP1BP3-212ENST00000487117 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
HP1BP3-212ENST00000487117 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
HP1BP3-212ENST00000487117 NUBP1P53384 320 aa15.37■□□□□ 0.05
HP1BP3-212ENST00000487117 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
HP1BP3-212ENST00000487117 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
HP1BP3-212ENST00000487117 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
HP1BP3-212ENST00000487117 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
HP1BP3-212ENST00000487117 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
HP1BP3-212ENST00000487117 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
HP1BP3-212ENST00000487117 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
HP1BP3-212ENST00000487117 GSE1Q14687 1217 aa15.24■□□□□ 0.03
HP1BP3-212ENST00000487117 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
HP1BP3-212ENST00000487117 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
HP1BP3-212ENST00000487117 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
HP1BP3-212ENST00000487117 RGL2O15211 777 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms