Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC10.92□□□□□ -0.664e-6■■□□□ 11.9
SUB1P53999 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.674e-6■■□□□ 11.9
SUB1P53999 POLG-215ENST00000635986 2351 ntTSL 510.86□□□□□ -0.674e-6■■□□□ 11.9
SUB1P53999 MRPL18-203ENST00000479638 600 ntTSL 510.74□□□□□ -0.698e-8■■□□□ 11.9
SUB1P53999 MAN2C1-213ENST00000563528 367 ntTSL 310.73□□□□□ -0.698e-8■■□□□ 11.9
SUB1P53999 POLG-217ENST00000636774 4151 ntTSL 510.69□□□□□ -0.74e-6■■□□□ 11.9
SUB1P53999 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.56□□□□□ -0.724e-6■■□□□ 11.9
SUB1P53999 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.56□□□□□ -0.724e-6■■□□□ 11.9
SUB1P53999 SPAG5-214ENST00000582076 719 ntTSL 310.4□□□□□ -0.744e-6■■□□□ 11.9
SUB1P53999 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.756e-12■■□□□ 11.9
SUB1P53999 COL18A1-201ENST00000342220 3386 ntTSL 210.37□□□□□ -0.754e-6■■□□□ 11.9
SUB1P53999 MAN2C1-205ENST00000562067 710 ntTSL 510.27□□□□□ -0.778e-8■■□□□ 11.9
SUB1P53999 MAN2C1-221ENST00000564929 851 ntTSL 510.27□□□□□ -0.778e-8■■□□□ 11.9
SUB1P53999 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.824e-6■■□□□ 11.9
SUB1P53999 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC9.87□□□□□ -0.834e-6■■□□□ 11.9
SUB1P53999 NARS-202ENST00000411676 1097 ntTSL 29.83□□□□□ -0.844e-6■■□□□ 11.9
SUB1P53999 ASAH1-269ENST00000638069 3068 ntTSL 59.36□□□□□ -0.914e-6■■□□□ 11.9
SUB1P53999 POLG-211ENST00000532584 708 ntTSL 39.33□□□□□ -0.924e-6■■□□□ 11.9
SUB1P53999 AC005726.2-202ENST00000531839 1033 ntAPPRIS P5 TSL 29.2□□□□□ -0.944e-6■■□□□ 11.9
SUB1P53999 NARS-205ENST00000587194 562 ntTSL 49.17□□□□□ -0.944e-6■■□□□ 11.9
SUB1P53999 NARS-212ENST00000591599 584 ntTSL 59.17□□□□□ -0.944e-6■■□□□ 11.9
SUB1P53999 NARS-203ENST00000540592 937 ntTSL 29.17□□□□□ -0.944e-6■■□□□ 11.9
SUB1P53999 POLG-221ENST00000637238 3022 ntTSL 58.74□□□□□ -1.014e-6■■□□□ 11.9
SUB1P53999 ZCCHC17-203ENST00000479629 761 ntTSL 28.59□□□□□ -1.034e-6■■□□□ 11.9
SUB1P53999 ACACA-235ENST00000614789 662 ntTSL 1 (best)8.42□□□□□ -1.068e-8■■□□□ 11.9
SUB1P53999 SPAG5-211ENST00000580676 1023 ntTSL 58.35□□□□□ -1.074e-6■■□□□ 11.9
SUB1P53999 POLG-222ENST00000637264 3153 ntTSL 58.3□□□□□ -1.084e-6■■□□□ 11.9
SUB1P53999 SPAG5-215ENST00000582175 657 ntTSL 58.01□□□□□ -1.134e-6■■□□□ 11.9
SUB1P53999 SNRNP200-207ENST00000493271 585 ntTSL 37.93□□□□□ -1.144e-6■■□□□ 11.9
SUB1P53999 SLC3A2-223ENST00000546312 564 ntTSL 27.57□□□□□ -1.24e-6■■□□□ 11.9
SUB1P53999 ASAH1-268ENST00000638028 2393 ntTSL 27.55□□□□□ -1.24e-6■■□□□ 11.9
SUB1P53999 SPAG5-207ENST00000580083 978 ntTSL 37.4□□□□□ -1.224e-6■■□□□ 11.9
SUB1P53999 NARS-208ENST00000588661 582 ntTSL 57.35□□□□□ -1.234e-6■■□□□ 11.9
SUB1P53999 RPL41-201ENST00000358888 551 ntTSL 37.26□□□□□ -1.254e-10■■□□□ 11.9
SUB1P53999 ACACA-246ENST00000621960 551 ntTSL 56.91□□□□□ -1.38e-8■■□□□ 11.9
SUB1P53999 ASAH1-248ENST00000637484 2304 ntTSL 56.86□□□□□ -1.314e-6■■□□□ 11.9
SUB1P53999 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.324e-10■■□□□ 11.9
SUB1P53999 SNRNP200-203ENST00000480242 3409 ntTSL 26.64□□□□□ -1.354e-6■■□□□ 11.9
SUB1P53999 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC6.36□□□□□ -1.394e-6■■□□□ 11.9
SUB1P53999 ACACA-232ENST00000614438 569 ntTSL 2 BASIC6.36□□□□□ -1.398e-8■■□□□ 11.9
SUB1P53999 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC6.36□□□□□ -1.394e-6■■□□□ 11.9
SUB1P53999 TMEM245-202ENST00000413712 1973 ntTSL 26.35□□□□□ -1.394e-6■■□□□ 11.9
SUB1P53999 ASAH1-220ENST00000636050 2546 ntTSL 56.28□□□□□ -1.44e-6■■□□□ 11.9
SUB1P53999 ASAH1-214ENST00000635756 1589 ntTSL 56.27□□□□□ -1.414e-6■■□□□ 11.9
SUB1P53999 ASAH1-257ENST00000637752 2708 nt6.24□□□□□ -1.414e-6■■□□□ 11.9
SUB1P53999 ASAH1-230ENST00000636563 1891 ntTSL 56.17□□□□□ -1.424e-6■■□□□ 11.9
SUB1P53999 TMEM245-205ENST00000491854 2435 ntTSL 26.06□□□□□ -1.444e-6■■□□□ 11.9
SUB1P53999 ACACA-228ENST00000613146 3974 ntTSL 1 (best)6.05□□□□□ -1.448e-8■■□□□ 11.9
SUB1P53999 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.454e-10■■□□□ 11.9
SUB1P53999 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC5.97□□□□□ -1.454e-6■■□□□ 11.9
SUB1P53999 SEC24C-207ENST00000635550 3424 ntTSL 25.91□□□□□ -1.464e-6■■□□□ 11.9
SUB1P53999 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC5.87□□□□□ -1.474e-6■■□□□ 11.9
SUB1P53999 POLG-207ENST00000528881 524 ntTSL 55.87□□□□□ -1.474e-6■■□□□ 11.9
SUB1P53999 SPAG5-208ENST00000580377 547 ntTSL 45.8□□□□□ -1.484e-6■■□□□ 11.9
SUB1P53999 RPL41-203ENST00000546485 335 ntTSL 25.73□□□□□ -1.494e-10■■□□□ 11.9
SUB1P53999 ASAH1-206ENST00000518746 3870 ntTSL 25.58□□□□□ -1.524e-6■■□□□ 11.9
SUB1P53999 ASAH1-253ENST00000637609 4981 ntTSL 55.41□□□□□ -1.544e-6■■□□□ 11.9
SUB1P53999 CNOT10-203ENST00000416457 2096 ntTSL 25.16□□□□□ -1.584e-6■■□□□ 11.9
SUB1P53999 UQCRC2-211ENST00000567810 582 ntTSL 35.1□□□□□ -1.594e-10■■□□□ 11.9
SUB1P53999 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.06□□□□□ -1.64e-6■■□□□ 11.9
SUB1P53999 ASAH1-246ENST00000637343 3671 ntTSL 45.01□□□□□ -1.614e-6■■□□□ 11.9
SUB1P53999 SPAG5-202ENST00000378976 755 ntTSL 54.66□□□□□ -1.664e-6■■□□□ 11.9
SUB1P53999 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.674e-6■■□□□ 11.9
SUB1P53999 ASAH1-218ENST00000636009 2148 ntTSL 54.64□□□□□ -1.674e-6■■□□□ 11.9
SUB1P53999 ASAH1-262ENST00000637857 2585 ntTSL 54.23□□□□□ -1.734e-6■■□□□ 11.9
SUB1P53999 ASAH1-242ENST00000637014 2626 ntTSL 23.99□□□□□ -1.774e-6■■□□□ 11.9
SUB1P53999 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.67□□□□□ -1.824e-6■■□□□ 11.9
SUB1P53999 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.58□□□□□ -1.844e-6■■□□□ 11.9
SUB1P53999 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.37□□□□□ -1.874e-6■■□□□ 11.9
SUB1P53999 TOMM7-206ENST00000496129 520 ntTSL 1 (best)3.25□□□□□ -1.896e-12■■□□□ 11.9
SUB1P53999 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.08□□□□□ -1.924e-6■■□□□ 11.9
SUB1P53999 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.958e-8■■□□□ 11.9
SUB1P53999 EIF4A1-204ENST00000577731 574 ntTSL 22.89□□□□□ -1.954e-10■■□□□ 11.9
SUB1P53999 PSMA3-212ENST00000557290 730 ntTSL 22.61□□□□□ -1.994e-6■■□□□ 11.9
SUB1P53999 PSMA3-204ENST00000553677 363 ntTSL 52.1□□□□□ -2.074e-6■■□□□ 11.9
SUB1P53999 PPA1-203ENST00000460755 412 ntTSL 51.91□□□□□ -2.14e-6■■□□□ 11.9
SUB1P53999 ACACA-224ENST00000612007 451 ntTSL 51.71□□□□□ -2.148e-8■■□□□ 11.9
SUB1P53999 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.192e-11■■□□□ 11.8
SUB1P53999 ANAPC5-210ENST00000536416 677 ntTSL 312.8□□□□□ -0.366e-7■■□□□ 11.8
SUB1P53999 ANAPC5-211ENST00000536837 509 ntTSL 411.8□□□□□ -0.526e-7■■□□□ 11.8
SUB1P53999 ANAPC5-220ENST00000544442 915 ntTSL 510.21□□□□□ -0.776e-7■■□□□ 11.8
SUB1P53999 ANAPC5-222ENST00000545801 1281 ntTSL 210.06□□□□□ -0.86e-7■■□□□ 11.8
SUB1P53999 ANAPC5-216ENST00000539871 704 ntTSL 59.52□□□□□ -0.896e-7■■□□□ 11.8
SUB1P53999 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.272e-6■■□□□ 11.8
SUB1P53999 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.14■□□□□ 0.019e-8■■□□□ 11.8
SUB1P53999 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.119e-8■■□□□ 11.8
SUB1P53999 ANP32A-207ENST00000486054 2015 ntTSL 214.06□□□□□ -0.161e-8■■□□□ 11.8
SUB1P53999 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.222e-6■■□□□ 11.8
SUB1P53999 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.54□□□□□ -0.249e-8■■□□□ 11.8
SUB1P53999 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.54□□□□□ -0.249e-8■■□□□ 11.8
SUB1P53999 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.431e-8■■□□□ 11.8
SUB1P53999 ANP32A-202ENST00000409628 2001 ntTSL 511.72□□□□□ -0.531e-8■■□□□ 11.8
SUB1P53999 ANP32A-201ENST00000267918 1084 ntTSL 311.33□□□□□ -0.61e-8■■□□□ 11.8
SUB1P53999 GSPT1-208ENST00000565267 1864 ntTSL 56.91□□□□□ -1.32e-6■■□□□ 11.8
SUB1P53999 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.312e-6■■□□□ 11.8
SUB1P53999 CSDE1-207ENST00000483407 741 ntTSL 24.25□□□□□ -1.738e-9■■□□□ 11.8
SUB1P53999 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.93e-7■■□□□ 11.8
SUB1P53999 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.4□□□□□ -0.12e-7■■□□□ 11.8
SUB1P53999 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.12e-7■■□□□ 11.8
SUB1P53999 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.35□□□□□ -0.592e-7■■□□□ 11.8
Retrieved 100 of 11,644 protein–RNA pairs in 612.2 ms