RNA–Protein interactions for RNA: ENST00000627541.1

ZCCHC17-209, Transcript of zinc finger CCHC-type containing 17, humanhuman

TSL 5 BASIC

Gene ZCCHC17, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17-209ENST00000627541 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
ZCCHC17-209ENST00000627541 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
ZCCHC17-209ENST00000627541 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
ZCCHC17-209ENST00000627541 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
ZCCHC17-209ENST00000627541 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
ZCCHC17-209ENST00000627541 FOXD1Q16676 465 aa18.42■□□□□ 0.54
ZCCHC17-209ENST00000627541 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
ZCCHC17-209ENST00000627541 ADRA2BP18089 450 aa17.95■□□□□ 0.46
ZCCHC17-209ENST00000627541 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
ZCCHC17-209ENST00000627541 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
ZCCHC17-209ENST00000627541 MSH5O43196 834 aa16.97■□□□□ 0.31
ZCCHC17-209ENST00000627541 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
ZCCHC17-209ENST00000627541 KCNA4P22459 653 aa16.72■□□□□ 0.27
ZCCHC17-209ENST00000627541 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
ZCCHC17-209ENST00000627541 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
ZCCHC17-209ENST00000627541 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
ZCCHC17-209ENST00000627541 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
ZCCHC17-209ENST00000627541 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
ZCCHC17-209ENST00000627541 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
ZCCHC17-209ENST00000627541 ABCC9O60706 1549 aa15.97■□□□□ 0.15
ZCCHC17-209ENST00000627541 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
ZCCHC17-209ENST00000627541 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
ZCCHC17-209ENST00000627541 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
ZCCHC17-209ENST00000627541 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
ZCCHC17-209ENST00000627541 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
ZCCHC17-209ENST00000627541 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
ZCCHC17-209ENST00000627541 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
ZCCHC17-209ENST00000627541 ZBTB22O15209 634 aa15.37■□□□□ 0.05
ZCCHC17-209ENST00000627541 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
ZCCHC17-209ENST00000627541 DNAJC5Q9H3Z4 198 aa15.3■□□□□ 0.04
ZCCHC17-209ENST00000627541 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
ZCCHC17-209ENST00000627541 DCAF8L2P0C7V8 631 aa15.22■□□□□ 0.03
ZCCHC17-209ENST00000627541 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
ZCCHC17-209ENST00000627541 ZCCHC6Q5VYS8 1495 aaKnown RBP15.16■□□□□ 0.02
ZCCHC17-209ENST00000627541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -07e-8■■■■□ 25
ZCCHC17-209ENST00000627541 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
ZCCHC17-209ENST00000627541 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
ZCCHC17-209ENST00000627541 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
ZCCHC17-209ENST00000627541 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
ZCCHC17-209ENST00000627541 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
ZCCHC17-209ENST00000627541 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
ZCCHC17-209ENST00000627541 NACADO15069 1562 aa14.81□□□□□ -0.04
ZCCHC17-209ENST00000627541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
ZCCHC17-209ENST00000627541 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
ZCCHC17-209ENST00000627541 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
ZCCHC17-209ENST00000627541 U3KPZ7 1027 aaPredicted RBP14.78□□□□□ -0.04
ZCCHC17-209ENST00000627541 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
ZCCHC17-209ENST00000627541 APLP2Q06481 763 aa14.6□□□□□ -0.07
ZCCHC17-209ENST00000627541 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
ZCCHC17-209ENST00000627541 SCRIBQ14160 1630 aa14.57□□□□□ -0.08
ZCCHC17-209ENST00000627541 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
ZCCHC17-209ENST00000627541 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
ZCCHC17-209ENST00000627541 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
ZCCHC17-209ENST00000627541 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
ZCCHC17-209ENST00000627541 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
ZCCHC17-209ENST00000627541 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.09
ZCCHC17-209ENST00000627541 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
ZCCHC17-209ENST00000627541 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
ZCCHC17-209ENST00000627541 CUX2O14529 1486 aa14.3□□□□□ -0.12
ZCCHC17-209ENST00000627541 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
ZCCHC17-209ENST00000627541 CAPN15O75808 1086 aa14.24□□□□□ -0.13
ZCCHC17-209ENST00000627541 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
ZCCHC17-209ENST00000627541 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
ZCCHC17-209ENST00000627541 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
ZCCHC17-209ENST00000627541 FKBP8Q14318 412 aa14.07□□□□□ -0.16
ZCCHC17-209ENST00000627541 POLA2Q14181 598 aa14.06□□□□□ -0.16
ZCCHC17-209ENST00000627541 TRIM41Q8WV44 630 aa14.04□□□□□ -0.16
ZCCHC17-209ENST00000627541 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
ZCCHC17-209ENST00000627541 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
ZCCHC17-209ENST00000627541 FBLN2P98095 1184 aa13.98□□□□□ -0.17
ZCCHC17-209ENST00000627541 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
ZCCHC17-209ENST00000627541 ABCB7O75027 752 aa13.96□□□□□ -0.17
ZCCHC17-209ENST00000627541 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
ZCCHC17-209ENST00000627541 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
ZCCHC17-209ENST00000627541 SMARCA4P51532 1647 aa13.9□□□□□ -0.18
ZCCHC17-209ENST00000627541 DSG3P32926 999 aa13.9□□□□□ -0.18
ZCCHC17-209ENST00000627541 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
ZCCHC17-209ENST00000627541 ERCC6Q03468 1493 aa13.83□□□□□ -0.2
ZCCHC17-209ENST00000627541 ATAD2BQ9ULI0 1458 aa13.79□□□□□ -0.2
ZCCHC17-209ENST00000627541 WIZO95785 1651 aa13.79□□□□□ -0.2
ZCCHC17-209ENST00000627541 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
ZCCHC17-209ENST00000627541 SMARCA2P51531 1590 aa13.77□□□□□ -0.21
ZCCHC17-209ENST00000627541 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
ZCCHC17-209ENST00000627541 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.21
ZCCHC17-209ENST00000627541 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
ZCCHC17-209ENST00000627541 NCAPD3P42695 1498 aa13.69□□□□□ -0.22
ZCCHC17-209ENST00000627541 THOC2Q8NI27 1593 aaKnown RBP13.67□□□□□ -0.22
ZCCHC17-209ENST00000627541 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
ZCCHC17-209ENST00000627541 PROM2Q8N271 834 aa13.59□□□□□ -0.23
ZCCHC17-209ENST00000627541 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
ZCCHC17-209ENST00000627541 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
ZCCHC17-209ENST00000627541 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
ZCCHC17-209ENST00000627541 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
ZCCHC17-209ENST00000627541 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
ZCCHC17-209ENST00000627541 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
ZCCHC17-209ENST00000627541 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
ZCCHC17-209ENST00000627541 NESP48681 1621 aa13.47□□□□□ -0.25
ZCCHC17-209ENST00000627541 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
ZCCHC17-209ENST00000627541 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
ZCCHC17-209ENST00000627541 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms