RNA–Protein interactions for RNA: ENST00000557508.5

PSMA3-213, Transcript of proteasome subunit alpha 3, humanhuman

TSL 5 BASIC

Gene PSMA3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-213ENST00000557508 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
PSMA3-213ENST00000557508 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
PSMA3-213ENST00000557508 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
PSMA3-213ENST00000557508 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
PSMA3-213ENST00000557508 FOXD1Q16676 465 aa20.9■□□□□ 0.94
PSMA3-213ENST00000557508 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
PSMA3-213ENST00000557508 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
PSMA3-213ENST00000557508 MSH5O43196 834 aa19.72■□□□□ 0.75
PSMA3-213ENST00000557508 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
PSMA3-213ENST00000557508 ADRA2BP18089 450 aa19.49■□□□□ 0.71
PSMA3-213ENST00000557508 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
PSMA3-213ENST00000557508 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
PSMA3-213ENST00000557508 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
PSMA3-213ENST00000557508 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
PSMA3-213ENST00000557508 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
PSMA3-213ENST00000557508 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
PSMA3-213ENST00000557508 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
PSMA3-213ENST00000557508 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
PSMA3-213ENST00000557508 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
PSMA3-213ENST00000557508 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
PSMA3-213ENST00000557508 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
PSMA3-213ENST00000557508 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
PSMA3-213ENST00000557508 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
PSMA3-213ENST00000557508 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
PSMA3-213ENST00000557508 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
PSMA3-213ENST00000557508 KCNA4P22459 653 aa16.25■□□□□ 0.19
PSMA3-213ENST00000557508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.18
PSMA3-213ENST00000557508 POTEHQ6S545 545 aa16.16■□□□□ 0.18
PSMA3-213ENST00000557508 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
PSMA3-213ENST00000557508 SLC4A2P04920 1241 aa15.87■□□□□ 0.13
PSMA3-213ENST00000557508 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
PSMA3-213ENST00000557508 DSG3P32926 999 aa15.62■□□□□ 0.09
PSMA3-213ENST00000557508 CAPN15O75808 1086 aa15.61■□□□□ 0.09
PSMA3-213ENST00000557508 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
PSMA3-213ENST00000557508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
PSMA3-213ENST00000557508 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
PSMA3-213ENST00000557508 APLP2Q06481 763 aa15.32■□□□□ 0.04
PSMA3-213ENST00000557508 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
PSMA3-213ENST00000557508 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
PSMA3-213ENST00000557508 ABCB7O75027 752 aa15.3■□□□□ 0.04
PSMA3-213ENST00000557508 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
PSMA3-213ENST00000557508 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
PSMA3-213ENST00000557508 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
PSMA3-213ENST00000557508 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
PSMA3-213ENST00000557508 ZBTB22O15209 634 aa15.01□□□□□ -0.01
PSMA3-213ENST00000557508 POLA2Q14181 598 aa15□□□□□ -0.01
PSMA3-213ENST00000557508 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
PSMA3-213ENST00000557508 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
PSMA3-213ENST00000557508 SP7Q8TDD2 431 aaPredicted RBP14.72□□□□□ -0.05
PSMA3-213ENST00000557508 ATXN8OSP0DMR3 200 aa14.62□□□□□ -0.07
PSMA3-213ENST00000557508 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
PSMA3-213ENST00000557508 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
PSMA3-213ENST00000557508 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
PSMA3-213ENST00000557508 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
PSMA3-213ENST00000557508 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
PSMA3-213ENST00000557508 PIP4P2Q8N4L2 257 aa14.3□□□□□ -0.12
PSMA3-213ENST00000557508 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
PSMA3-213ENST00000557508 PITPNM1O00562 1244 aa14.25□□□□□ -0.13
PSMA3-213ENST00000557508 FBLN2P98095 1184 aa14.24□□□□□ -0.13
PSMA3-213ENST00000557508 HAX1O00165 279 aa14.21□□□□□ -0.13
PSMA3-213ENST00000557508 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
PSMA3-213ENST00000557508 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
PSMA3-213ENST00000557508 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
PSMA3-213ENST00000557508 FXR2P51116 673 aaKnown RBP eCLIP14.14□□□□□ -0.15
PSMA3-213ENST00000557508 EVX2Q03828 476 aa14.14□□□□□ -0.15
PSMA3-213ENST00000557508 SSUH2Q9Y2M2 353 aa14.08□□□□□ -0.16
PSMA3-213ENST00000557508 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
PSMA3-213ENST00000557508 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
PSMA3-213ENST00000557508 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
PSMA3-213ENST00000557508 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
PSMA3-213ENST00000557508 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
PSMA3-213ENST00000557508 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
PSMA3-213ENST00000557508 LHX8Q68G74 356 aa13.79□□□□□ -0.2
PSMA3-213ENST00000557508 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
PSMA3-213ENST00000557508 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
PSMA3-213ENST00000557508 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
PSMA3-213ENST00000557508 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
PSMA3-213ENST00000557508 GABBR2O75899 941 aa13.65□□□□□ -0.22
PSMA3-213ENST00000557508 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
PSMA3-213ENST00000557508 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
PSMA3-213ENST00000557508 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
PSMA3-213ENST00000557508 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
PSMA3-213ENST00000557508 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
PSMA3-213ENST00000557508 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
PSMA3-213ENST00000557508 PROM2Q8N271 834 aa13.31□□□□□ -0.28
PSMA3-213ENST00000557508 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
PSMA3-213ENST00000557508 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
PSMA3-213ENST00000557508 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
PSMA3-213ENST00000557508 CLCN6P51797 869 aa13.15□□□□□ -0.3
PSMA3-213ENST00000557508 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
PSMA3-213ENST00000557508 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
PSMA3-213ENST00000557508 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
PSMA3-213ENST00000557508 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
PSMA3-213ENST00000557508 POTEMA6NI47 508 aa13.05□□□□□ -0.32
PSMA3-213ENST00000557508 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
PSMA3-213ENST00000557508 POTEB2H3BUK9 544 aa13□□□□□ -0.33
PSMA3-213ENST00000557508 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
PSMA3-213ENST00000557508 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
PSMA3-213ENST00000557508 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
PSMA3-213ENST00000557508 MS4A3Q96HJ5 214 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms