RNA–Protein interactions for RNA: ENST00000344147.9

ZCCHC17-201, Transcript of zinc finger CCHC-type containing 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZCCHC17, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17-201ENST00000344147 NISCHQ9Y2I1 1504 aa33.68■■■□□ 2.98
ZCCHC17-201ENST00000344147 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
ZCCHC17-201ENST00000344147 ABCC9O60706 1549 aa28.79■■■□□ 2.2
ZCCHC17-201ENST00000344147 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
ZCCHC17-201ENST00000344147 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
ZCCHC17-201ENST00000344147 NACADO15069 1562 aa27.86■■■□□ 2.05
ZCCHC17-201ENST00000344147 DCAF1Q9Y4B6 1507 aa27.84■■■□□ 2.05
ZCCHC17-201ENST00000344147 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
ZCCHC17-201ENST00000344147 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
ZCCHC17-201ENST00000344147 UNC13AQ9UPW8 1703 aa27.29■■□□□ 1.96
ZCCHC17-201ENST00000344147 SCRIBQ14160 1630 aa27.22■■□□□ 1.95
ZCCHC17-201ENST00000344147 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
ZCCHC17-201ENST00000344147 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
ZCCHC17-201ENST00000344147 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
ZCCHC17-201ENST00000344147 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
ZCCHC17-201ENST00000344147 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
ZCCHC17-201ENST00000344147 DNAJC5BQ9UF47 199 aa26.17■■□□□ 1.78
ZCCHC17-201ENST00000344147 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
ZCCHC17-201ENST00000344147 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
ZCCHC17-201ENST00000344147 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
ZCCHC17-201ENST00000344147 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
ZCCHC17-201ENST00000344147 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.73
ZCCHC17-201ENST00000344147 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
ZCCHC17-201ENST00000344147 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
ZCCHC17-201ENST00000344147 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
ZCCHC17-201ENST00000344147 WIZO95785 1651 aa25.75■■□□□ 1.71
ZCCHC17-201ENST00000344147 NCAPD3P42695 1498 aa25.73■■□□□ 1.71
ZCCHC17-201ENST00000344147 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
ZCCHC17-201ENST00000344147 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
ZCCHC17-201ENST00000344147 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
ZCCHC17-201ENST00000344147 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
ZCCHC17-201ENST00000344147 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
ZCCHC17-201ENST00000344147 NESP48681 1621 aa25.06■■□□□ 1.6
ZCCHC17-201ENST00000344147 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
ZCCHC17-201ENST00000344147 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
ZCCHC17-201ENST00000344147 CFTRP13569 1480 aa24.94■■□□□ 1.58
ZCCHC17-201ENST00000344147 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
ZCCHC17-201ENST00000344147 KIF21AQ7Z4S6 1674 aa24.76■■□□□ 1.55
ZCCHC17-201ENST00000344147 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
ZCCHC17-201ENST00000344147 ERCC6Q03468 1493 aa24.72■■□□□ 1.55
ZCCHC17-201ENST00000344147 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
ZCCHC17-201ENST00000344147 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
ZCCHC17-201ENST00000344147 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
ZCCHC17-201ENST00000344147 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
ZCCHC17-201ENST00000344147 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
ZCCHC17-201ENST00000344147 WDR62O43379 1518 aa24.44■■□□□ 1.5
ZCCHC17-201ENST00000344147 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
ZCCHC17-201ENST00000344147 TOPBP1Q92547 1522 aa24.38■■□□□ 1.49
ZCCHC17-201ENST00000344147 CUX1P39880 1505 aa24.36■■□□□ 1.49
ZCCHC17-201ENST00000344147 DNMBPQ6XZF7 1577 aa24.36■■□□□ 1.49
ZCCHC17-201ENST00000344147 CUX2O14529 1486 aa24.31■■□□□ 1.48
ZCCHC17-201ENST00000344147 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
ZCCHC17-201ENST00000344147 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
ZCCHC17-201ENST00000344147 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
ZCCHC17-201ENST00000344147 TOP2BQ02880 1626 aa24.22■■□□□ 1.47
ZCCHC17-201ENST00000344147 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.46
ZCCHC17-201ENST00000344147 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.46
ZCCHC17-201ENST00000344147 RAD54L2Q9Y4B4 1467 aa24.12■■□□□ 1.45
ZCCHC17-201ENST00000344147 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
ZCCHC17-201ENST00000344147 SOGA1O94964 1423 aa24.09■■□□□ 1.45
ZCCHC17-201ENST00000344147 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
ZCCHC17-201ENST00000344147 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
ZCCHC17-201ENST00000344147 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
ZCCHC17-201ENST00000344147 WDR97A6NE52 1622 aa24■■□□□ 1.43
ZCCHC17-201ENST00000344147 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
ZCCHC17-201ENST00000344147 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
ZCCHC17-201ENST00000344147 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
ZCCHC17-201ENST00000344147 AQRO60306 1485 aaKnown RBP eCLIP23.93■■□□□ 1.42
ZCCHC17-201ENST00000344147 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
ZCCHC17-201ENST00000344147 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
ZCCHC17-201ENST00000344147 GAPVD1Q14C86 1478 aa23.82■■□□□ 1.4
ZCCHC17-201ENST00000344147 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
ZCCHC17-201ENST00000344147 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
ZCCHC17-201ENST00000344147 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
ZCCHC17-201ENST00000344147 GRIN2BQ13224 1484 aa23.74■■□□□ 1.39
ZCCHC17-201ENST00000344147 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
ZCCHC17-201ENST00000344147 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
ZCCHC17-201ENST00000344147 IGF1RP08069 1367 aa23.66■■□□□ 1.38
ZCCHC17-201ENST00000344147 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
ZCCHC17-201ENST00000344147 ADAMTS12P58397 1594 aa23.58■■□□□ 1.37
ZCCHC17-201ENST00000344147 CHD1O14646 1710 aa23.56■■□□□ 1.36
ZCCHC17-201ENST00000344147 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
ZCCHC17-201ENST00000344147 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
ZCCHC17-201ENST00000344147 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
ZCCHC17-201ENST00000344147 FBLN2P98095 1184 aa23.53■■□□□ 1.36
ZCCHC17-201ENST00000344147 CUL7Q14999 1698 aa23.51■■□□□ 1.35
ZCCHC17-201ENST00000344147 CHMP7Q8WUX9 453 aaPredicted RBP23.51■■□□□ 1.35
ZCCHC17-201ENST00000344147 EEA1Q15075 1411 aa23.5■■□□□ 1.35
ZCCHC17-201ENST00000344147 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
ZCCHC17-201ENST00000344147 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
ZCCHC17-201ENST00000344147 GRIN2AQ12879 1464 aa23.45■■□□□ 1.35
ZCCHC17-201ENST00000344147 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
ZCCHC17-201ENST00000344147 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
ZCCHC17-201ENST00000344147 RAPGEF2Q9Y4G8 1499 aa23.39■■□□□ 1.33
ZCCHC17-201ENST00000344147 CEP170Q5SW79 1584 aa23.36■■□□□ 1.33
ZCCHC17-201ENST00000344147 NUP160Q12769 1436 aa23.34■■□□□ 1.33
ZCCHC17-201ENST00000344147 KIF21BO75037 1637 aa23.29■■□□□ 1.32
ZCCHC17-201ENST00000344147 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
ZCCHC17-201ENST00000344147 EHMT2Q96KQ7 1210 aa23.25■■□□□ 1.31
ZCCHC17-201ENST00000344147 KIAA0586Q9BVV6 1533 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms