RNA–Protein interactions for RNA: ENST00000546109.5

ZCCHC17-204, Transcript of zinc finger CCHC-type containing 17, humanhuman

TSL 2 BASIC

Gene ZCCHC17, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17-204ENST00000546109 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
ZCCHC17-204ENST00000546109 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.58
ZCCHC17-204ENST00000546109 ABCC9O60706 1549 aa30.47■■■□□ 2.47
ZCCHC17-204ENST00000546109 RB1CC1Q8TDY2 1594 aa29.29■■■□□ 2.28
ZCCHC17-204ENST00000546109 NACADO15069 1562 aa29.27■■■□□ 2.28
ZCCHC17-204ENST00000546109 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
ZCCHC17-204ENST00000546109 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
ZCCHC17-204ENST00000546109 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
ZCCHC17-204ENST00000546109 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
ZCCHC17-204ENST00000546109 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
ZCCHC17-204ENST00000546109 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
ZCCHC17-204ENST00000546109 BICRAQ9NZM4 1560 aa28.45■■■□□ 2.15
ZCCHC17-204ENST00000546109 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
ZCCHC17-204ENST00000546109 SHROOM4Q9ULL8 1493 aa28.11■■■□□ 2.09
ZCCHC17-204ENST00000546109 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.07
ZCCHC17-204ENST00000546109 EIF4G1Q04637 1599 aaKnown RBP27.68■■■□□ 2.02
ZCCHC17-204ENST00000546109 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
ZCCHC17-204ENST00000546109 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
ZCCHC17-204ENST00000546109 SMARCA4P51532 1647 aa27.2■■□□□ 1.94
ZCCHC17-204ENST00000546109 BAZ1AQ9NRL2 1556 aaPredicted RBP27.16■■□□□ 1.94
ZCCHC17-204ENST00000546109 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
ZCCHC17-204ENST00000546109 MROH2BQ7Z745 1585 aa27.04■■□□□ 1.92
ZCCHC17-204ENST00000546109 NCAPD3P42695 1498 aa27.02■■□□□ 1.92
ZCCHC17-204ENST00000546109 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
ZCCHC17-204ENST00000546109 PEG3Q9GZU2 1588 aa26.94■■□□□ 1.9
ZCCHC17-204ENST00000546109 HMGXB3Q12766 1538 aa26.89■■□□□ 1.9
ZCCHC17-204ENST00000546109 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
ZCCHC17-204ENST00000546109 WIZO95785 1651 aa26.74■■□□□ 1.87
ZCCHC17-204ENST00000546109 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
ZCCHC17-204ENST00000546109 TOP2AP11388 1531 aaKnown RBP26.45■■□□□ 1.82
ZCCHC17-204ENST00000546109 NESP48681 1621 aa26.39■■□□□ 1.81
ZCCHC17-204ENST00000546109 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
ZCCHC17-204ENST00000546109 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
ZCCHC17-204ENST00000546109 CADPSQ9ULU8 1353 aa26.22■■□□□ 1.79
ZCCHC17-204ENST00000546109 CCDC88BA6NC98 1476 aa26.14■■□□□ 1.77
ZCCHC17-204ENST00000546109 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
ZCCHC17-204ENST00000546109 CFTRP13569 1480 aa26.09■■□□□ 1.77
ZCCHC17-204ENST00000546109 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
ZCCHC17-204ENST00000546109 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
ZCCHC17-204ENST00000546109 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
ZCCHC17-204ENST00000546109 CUX2O14529 1486 aa25.95■■□□□ 1.74
ZCCHC17-204ENST00000546109 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
ZCCHC17-204ENST00000546109 CEP164Q9UPV0 1460 aa25.9■■□□□ 1.74
ZCCHC17-204ENST00000546109 PRDM2Q13029 1718 aa25.86■■□□□ 1.73
ZCCHC17-204ENST00000546109 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
ZCCHC17-204ENST00000546109 WDR62O43379 1518 aa25.78■■□□□ 1.72
ZCCHC17-204ENST00000546109 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
ZCCHC17-204ENST00000546109 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
ZCCHC17-204ENST00000546109 DNMBPQ6XZF7 1577 aa25.49■■□□□ 1.67
ZCCHC17-204ENST00000546109 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
ZCCHC17-204ENST00000546109 CUX1P39880 1505 aa25.36■■□□□ 1.65
ZCCHC17-204ENST00000546109 IFT140Q96RY7 1462 aa25.35■■□□□ 1.65
ZCCHC17-204ENST00000546109 POLA1P09884 1462 aaPredicted RBP25.33■■□□□ 1.64
ZCCHC17-204ENST00000546109 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
ZCCHC17-204ENST00000546109 ZNF608Q9ULD9 1512 aaPredicted RBP25.26■■□□□ 1.63
ZCCHC17-204ENST00000546109 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
ZCCHC17-204ENST00000546109 RAD54L2Q9Y4B4 1467 aa25.21■■□□□ 1.63
ZCCHC17-204ENST00000546109 SOGA1O94964 1423 aa25.19■■□□□ 1.62
ZCCHC17-204ENST00000546109 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
ZCCHC17-204ENST00000546109 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
ZCCHC17-204ENST00000546109 SYNJ1O43426 1573 aa25.15■■□□□ 1.62
ZCCHC17-204ENST00000546109 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
ZCCHC17-204ENST00000546109 BIVM-ERCC5R4GMW8 1640 aa25.13■■□□□ 1.61
ZCCHC17-204ENST00000546109 AQRO60306 1485 aaKnown RBP eCLIP25.11■■□□□ 1.61
ZCCHC17-204ENST00000546109 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
ZCCHC17-204ENST00000546109 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
ZCCHC17-204ENST00000546109 WDR97A6NE52 1622 aa25.06■■□□□ 1.6
ZCCHC17-204ENST00000546109 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
ZCCHC17-204ENST00000546109 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
ZCCHC17-204ENST00000546109 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
ZCCHC17-204ENST00000546109 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
ZCCHC17-204ENST00000546109 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.57
ZCCHC17-204ENST00000546109 PBRM1Q86U86 1689 aa24.86■■□□□ 1.57
ZCCHC17-204ENST00000546109 OSCARQ8IYS5 282 aa24.85■■□□□ 1.57
ZCCHC17-204ENST00000546109 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
ZCCHC17-204ENST00000546109 CHD1O14646 1710 aa24.81■■□□□ 1.56
ZCCHC17-204ENST00000546109 FBLN2P98095 1184 aa24.76■■□□□ 1.55
ZCCHC17-204ENST00000546109 SYNJ2O15056 1496 aa24.74■■□□□ 1.55
ZCCHC17-204ENST00000546109 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
ZCCHC17-204ENST00000546109 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
ZCCHC17-204ENST00000546109 ADAMTS12P58397 1594 aa24.69■■□□□ 1.54
ZCCHC17-204ENST00000546109 KIF27Q86VH2 1401 aa24.64■■□□□ 1.54
ZCCHC17-204ENST00000546109 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
ZCCHC17-204ENST00000546109 GRIN2AQ12879 1464 aa24.6■■□□□ 1.53
ZCCHC17-204ENST00000546109 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
ZCCHC17-204ENST00000546109 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
ZCCHC17-204ENST00000546109 IGF1RP08069 1367 aa24.56■■□□□ 1.52
ZCCHC17-204ENST00000546109 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
ZCCHC17-204ENST00000546109 RIMBP3CA6NJZ7 1639 aa24.49■■□□□ 1.51
ZCCHC17-204ENST00000546109 RIMBP3BA6NNM3 1639 aa24.49■■□□□ 1.51
ZCCHC17-204ENST00000546109 RIMBP3Q9UFD9 1639 aa24.49■■□□□ 1.51
ZCCHC17-204ENST00000546109 CEP170Q5SW79 1584 aa24.49■■□□□ 1.51
ZCCHC17-204ENST00000546109 NUP160Q12769 1436 aa24.49■■□□□ 1.51
ZCCHC17-204ENST00000546109 CUL7Q14999 1698 aa24.47■■□□□ 1.51
ZCCHC17-204ENST00000546109 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
ZCCHC17-204ENST00000546109 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.5
ZCCHC17-204ENST00000546109 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
ZCCHC17-204ENST00000546109 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
ZCCHC17-204ENST00000546109 SHROOM2Q13796 1616 aa24.3■■□□□ 1.48
ZCCHC17-204ENST00000546109 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms