RNA–Protein interactions for RNA: ENST00000621960.1

ACACA-246, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 5

Gene ACACA, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-246ENST00000621960 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
ACACA-246ENST00000621960 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
ACACA-246ENST00000621960 ABCC9O60706 1549 aa21.62■■□□□ 1.05
ACACA-246ENST00000621960 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
ACACA-246ENST00000621960 NACADO15069 1562 aa20.46■□□□□ 0.87
ACACA-246ENST00000621960 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
ACACA-246ENST00000621960 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
ACACA-246ENST00000621960 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
ACACA-246ENST00000621960 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
ACACA-246ENST00000621960 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.89e-8■■□□□ 11.5
ACACA-246ENST00000621960 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
ACACA-246ENST00000621960 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
ACACA-246ENST00000621960 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
ACACA-246ENST00000621960 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
ACACA-246ENST00000621960 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
ACACA-246ENST00000621960 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
ACACA-246ENST00000621960 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
ACACA-246ENST00000621960 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
ACACA-246ENST00000621960 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
ACACA-246ENST00000621960 NCAPD3P42695 1498 aa18.83■□□□□ 0.6
ACACA-246ENST00000621960 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
ACACA-246ENST00000621960 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
ACACA-246ENST00000621960 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
ACACA-246ENST00000621960 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
ACACA-246ENST00000621960 ERCC6Q03468 1493 aa18.68■□□□□ 0.58
ACACA-246ENST00000621960 CUX2O14529 1486 aa18.66■□□□□ 0.58
ACACA-246ENST00000621960 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.58
ACACA-246ENST00000621960 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
ACACA-246ENST00000621960 NESP48681 1621 aa18.58■□□□□ 0.56
ACACA-246ENST00000621960 DNAJC5Q9H3Z4 198 aa18.57■□□□□ 0.56
ACACA-246ENST00000621960 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
ACACA-246ENST00000621960 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
ACACA-246ENST00000621960 THOC2Q8NI27 1593 aaKnown RBP18.49■□□□□ 0.55
ACACA-246ENST00000621960 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
ACACA-246ENST00000621960 WIZO95785 1651 aa18.38■□□□□ 0.53
ACACA-246ENST00000621960 PDS5BQ9NTI5 1447 aa18.31■□□□□ 0.52
ACACA-246ENST00000621960 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
ACACA-246ENST00000621960 MRC2Q9UBG0 1479 aa18.19■□□□□ 0.5
ACACA-246ENST00000621960 WDR62O43379 1518 aa18.18■□□□□ 0.5
ACACA-246ENST00000621960 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
ACACA-246ENST00000621960 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
ACACA-246ENST00000621960 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
ACACA-246ENST00000621960 PRDM2Q13029 1718 aa18.1■□□□□ 0.49
ACACA-246ENST00000621960 FANCD2Q9BXW9 1451 aa18.08■□□□□ 0.49
ACACA-246ENST00000621960 CFTRP13569 1480 aa18.06■□□□□ 0.48
ACACA-246ENST00000621960 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
ACACA-246ENST00000621960 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
ACACA-246ENST00000621960 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
ACACA-246ENST00000621960 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
ACACA-246ENST00000621960 IFT140Q96RY7 1462 aa17.73■□□□□ 0.43
ACACA-246ENST00000621960 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
ACACA-246ENST00000621960 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
ACACA-246ENST00000621960 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
ACACA-246ENST00000621960 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
ACACA-246ENST00000621960 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
ACACA-246ENST00000621960 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
ACACA-246ENST00000621960 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
ACACA-246ENST00000621960 TARBP1Q13395 1621 aaKnown RBP17.64■□□□□ 0.41
ACACA-246ENST00000621960 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
ACACA-246ENST00000621960 CHD1O14646 1710 aa17.63■□□□□ 0.41
ACACA-246ENST00000621960 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
ACACA-246ENST00000621960 ARHGEF11O15085 1522 aa17.54■□□□□ 0.4
ACACA-246ENST00000621960 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.395e-6■■■■■ 28
ACACA-246ENST00000621960 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
ACACA-246ENST00000621960 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
ACACA-246ENST00000621960 FGD5Q6ZNL6 1462 aa17.45■□□□□ 0.38
ACACA-246ENST00000621960 CUX1P39880 1505 aa17.44■□□□□ 0.38
ACACA-246ENST00000621960 SOGA1O94964 1423 aa17.43■□□□□ 0.38
ACACA-246ENST00000621960 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
ACACA-246ENST00000621960 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
ACACA-246ENST00000621960 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
ACACA-246ENST00000621960 FBLN2P98095 1184 aa17.37■□□□□ 0.37
ACACA-246ENST00000621960 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
ACACA-246ENST00000621960 CLASP1Q7Z460 1538 aa17.34■□□□□ 0.37
ACACA-246ENST00000621960 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
ACACA-246ENST00000621960 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
ACACA-246ENST00000621960 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
ACACA-246ENST00000621960 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
ACACA-246ENST00000621960 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
ACACA-246ENST00000621960 SYNJ2O15056 1496 aa17.27■□□□□ 0.36
ACACA-246ENST00000621960 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
ACACA-246ENST00000621960 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
ACACA-246ENST00000621960 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
ACACA-246ENST00000621960 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
ACACA-246ENST00000621960 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
ACACA-246ENST00000621960 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
ACACA-246ENST00000621960 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
ACACA-246ENST00000621960 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
ACACA-246ENST00000621960 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
ACACA-246ENST00000621960 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
ACACA-246ENST00000621960 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
ACACA-246ENST00000621960 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
ACACA-246ENST00000621960 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
ACACA-246ENST00000621960 ERCC6L2Q5T890 1561 aa17.05■□□□□ 0.32
ACACA-246ENST00000621960 NUP160Q12769 1436 aa17.04■□□□□ 0.32
ACACA-246ENST00000621960 FHAD1B1AJZ9 1412 aa17.02■□□□□ 0.31
ACACA-246ENST00000621960 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
ACACA-246ENST00000621960 KIF13AQ9H1H9 1805 aa16.89■□□□□ 0.29
ACACA-246ENST00000621960 CUL7Q14999 1698 aa16.87■□□□□ 0.29
ACACA-246ENST00000621960 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms