RNA–Protein interactions for RNA: ENST00000635550.1

SEC24C-207, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 2

Gene SEC24C, Length 3,424 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-207ENST00000635550 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
SEC24C-207ENST00000635550 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
SEC24C-207ENST00000635550 CCDC180Q9P1Z9 1646 aa12.97□□□□□ -0.33
SEC24C-207ENST00000635550 ZCCHC6Q5VYS8 1495 aaKnown RBP12.95□□□□□ -0.34
SEC24C-207ENST00000635550 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
SEC24C-207ENST00000635550 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
SEC24C-207ENST00000635550 DCAF1Q9Y4B6 1507 aa12.53□□□□□ -0.4
SEC24C-207ENST00000635550 CHIC1Q5VXU3 224 aa12.49□□□□□ -0.41
SEC24C-207ENST00000635550 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
SEC24C-207ENST00000635550 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
SEC24C-207ENST00000635550 ABCC9O60706 1549 aa12.22□□□□□ -0.45
SEC24C-207ENST00000635550 LOC105371045A0A1W2PR82 267 aa12.17□□□□□ -0.46
SEC24C-207ENST00000635550 RSF1Q96T23 1441 aaPredicted RBP12.14□□□□□ -0.47
SEC24C-207ENST00000635550 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
SEC24C-207ENST00000635550 HRCP23327 699 aa12.1□□□□□ -0.47
SEC24C-207ENST00000635550 RB1CC1Q8TDY2 1594 aa12.02□□□□□ -0.48
SEC24C-207ENST00000635550 NACADO15069 1562 aa12.01□□□□□ -0.49
SEC24C-207ENST00000635550 CECR2Q9BXF3 1484 aa11.99□□□□□ -0.49
SEC24C-207ENST00000635550 TRIM41Q8WV44 630 aa11.96□□□□□ -0.5
SEC24C-207ENST00000635550 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
SEC24C-207ENST00000635550 PPARGC1BQ86YN6 1023 aaKnown RBP11.91□□□□□ -0.5
SEC24C-207ENST00000635550 FAM9AQ8IZU1 332 aaPredicted RBP11.89□□□□□ -0.51
SEC24C-207ENST00000635550 WIZO95785 1651 aa11.88□□□□□ -0.51
SEC24C-207ENST00000635550 TRIM26Q12899 539 aaPredicted RBP11.86□□□□□ -0.51
SEC24C-207ENST00000635550 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
SEC24C-207ENST00000635550 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
SEC24C-207ENST00000635550 EIF4G1Q04637 1599 aaKnown RBP11.69□□□□□ -0.54
SEC24C-207ENST00000635550 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
SEC24C-207ENST00000635550 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
SEC24C-207ENST00000635550 TOP2AP11388 1531 aaKnown RBP11.65□□□□□ -0.55
SEC24C-207ENST00000635550 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
SEC24C-207ENST00000635550 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
SEC24C-207ENST00000635550 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
SEC24C-207ENST00000635550 PABPN1Q86U42 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
SEC24C-207ENST00000635550 ZEB1P37275 1124 aaPredicted RBP11.55□□□□□ -0.56
SEC24C-207ENST00000635550 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
SEC24C-207ENST00000635550 SOGA1O94964 1423 aa11.52□□□□□ -0.57
SEC24C-207ENST00000635550 RUSC2Q8N2Y8 1516 aa11.47□□□□□ -0.57
SEC24C-207ENST00000635550 CEP162Q5TB80 1403 aa11.44□□□□□ -0.58
SEC24C-207ENST00000635550 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
SEC24C-207ENST00000635550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
SEC24C-207ENST00000635550 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
SEC24C-207ENST00000635550 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
SEC24C-207ENST00000635550 WRNQ14191 1432 aaPredicted RBP eCLIP11.4□□□□□ -0.58
SEC24C-207ENST00000635550 TNIKQ9UKE5 1360 aa11.4□□□□□ -0.58
SEC24C-207ENST00000635550 UBTFP17480 764 aaKnown RBP11.39□□□□□ -0.59
SEC24C-207ENST00000635550 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
SEC24C-207ENST00000635550 EEA1Q15075 1411 aa11.37□□□□□ -0.59
SEC24C-207ENST00000635550 ATAD2BQ9ULI0 1458 aa11.37□□□□□ -0.59
SEC24C-207ENST00000635550 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
SEC24C-207ENST00000635550 SYNJ1O43426 1573 aa11.36□□□□□ -0.59
SEC24C-207ENST00000635550 BAZ1BQ9UIG0 1483 aaKnown RBP11.33□□□□□ -0.6
SEC24C-207ENST00000635550 GOLGA3Q08378 1498 aa11.33□□□□□ -0.6
SEC24C-207ENST00000635550 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
SEC24C-207ENST00000635550 KIF21BO75037 1637 aa11.25□□□□□ -0.61
SEC24C-207ENST00000635550 RAPGEF2Q9Y4G8 1499 aa11.22□□□□□ -0.61
SEC24C-207ENST00000635550 CLIP1P30622 1438 aa11.21□□□□□ -0.61
SEC24C-207ENST00000635550 RANGAP1P46060 587 aaPredicted RBP11.21□□□□□ -0.61
SEC24C-207ENST00000635550 TOP2BQ02880 1626 aa11.19□□□□□ -0.62
SEC24C-207ENST00000635550 SCAF1Q9H7N4 1312 aaKnown RBP11.18□□□□□ -0.62
SEC24C-207ENST00000635550 VPS8Q8N3P4 1428 aa11.16□□□□□ -0.62
SEC24C-207ENST00000635550 HNRNPUL2Q1KMD3 747 aaKnown RBP11.16□□□□□ -0.62
SEC24C-207ENST00000635550 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.63
SEC24C-207ENST00000635550 BIVM-ERCC5R4GMW8 1640 aa11.14□□□□□ -0.63
SEC24C-207ENST00000635550 NCAPD3P42695 1498 aa11.13□□□□□ -0.63
SEC24C-207ENST00000635550 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
SEC24C-207ENST00000635550 APLP2Q06481 763 aa11.1□□□□□ -0.63
SEC24C-207ENST00000635550 CUX1P39880 1505 aa11.1□□□□□ -0.63
SEC24C-207ENST00000635550 PRXQ9BXM0 1461 aa11.09□□□□□ -0.63
SEC24C-207ENST00000635550 ERICH3Q5RHP9 1530 aa11.06□□□□□ -0.64
SEC24C-207ENST00000635550 NEUROD1Q13562 356 aa11.06□□□□□ -0.64
SEC24C-207ENST00000635550 CFTRP13569 1480 aa11.06□□□□□ -0.64
SEC24C-207ENST00000635550 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
SEC24C-207ENST00000635550 ARAP1Q96P48 1450 aa11.04□□□□□ -0.64
SEC24C-207ENST00000635550 ACIN1Q9UKV3 1341 aaKnown RBP11.04□□□□□ -0.64
SEC24C-207ENST00000635550 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
SEC24C-207ENST00000635550 KIF27Q86VH2 1401 aa11.02□□□□□ -0.64
SEC24C-207ENST00000635550 ARHGAP35Q9NRY4 1499 aa10.95□□□□□ -0.66
SEC24C-207ENST00000635550 CENPBP07199 599 aaPredicted RBP10.94□□□□□ -0.66
SEC24C-207ENST00000635550 GTF3C3Q9Y5Q9 886 aa10.94□□□□□ -0.66
SEC24C-207ENST00000635550 IGF1RP08069 1367 aa10.94□□□□□ -0.66
SEC24C-207ENST00000635550 CUX2O14529 1486 aa10.93□□□□□ -0.66
SEC24C-207ENST00000635550 CADPSQ9ULU8 1353 aa10.93□□□□□ -0.66
SEC24C-207ENST00000635550 PRDM2Q13029 1718 aa10.93□□□□□ -0.66
SEC24C-207ENST00000635550 MIER1Q8N108 512 aa10.93□□□□□ -0.66
SEC24C-207ENST00000635550 DHX57Q6P158 1386 aaKnown RBP10.92□□□□□ -0.66
SEC24C-207ENST00000635550 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
SEC24C-207ENST00000635550 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
SEC24C-207ENST00000635550 FGD5Q6ZNL6 1462 aa10.9□□□□□ -0.67
SEC24C-207ENST00000635550 ITGAEP38570 1179 aa10.87□□□□□ -0.67
SEC24C-207ENST00000635550 CARMIL1Q5VZK9 1371 aa10.87□□□□□ -0.67
SEC24C-207ENST00000635550 CC2D2AQ9P2K1 1620 aa10.87□□□□□ -0.67
SEC24C-207ENST00000635550 CCNB3Q8WWL7 1395 aa10.87□□□□□ -0.67
SEC24C-207ENST00000635550 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
SEC24C-207ENST00000635550 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
SEC24C-207ENST00000635550 P3H3Q8IVL6 736 aa10.82□□□□□ -0.68
SEC24C-207ENST00000635550 PELP1Q8IZL8 1130 aaKnown RBP10.82□□□□□ -0.68
SEC24C-207ENST00000635550 TIAM1Q13009 1591 aa10.82□□□□□ -0.68
SEC24C-207ENST00000635550 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
SEC24C-207ENST00000635550 NESP48681 1621 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms