RNA–Protein interactions for RNA: ENST00000501597.3

RPL41-202, Transcript of ribosomal protein L41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL41, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL41-202ENST00000501597 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
RPL41-202ENST00000501597 AEBP2Q6ZN18 517 aaPredicted RBP18.79■□□□□ 0.6
RPL41-202ENST00000501597 NISCHQ9Y2I1 1504 aa17.24■□□□□ 0.35
RPL41-202ENST00000501597 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
RPL41-202ENST00000501597 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
RPL41-202ENST00000501597 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
RPL41-202ENST00000501597 CCDC180Q9P1Z9 1646 aa15.38■□□□□ 0.05
RPL41-202ENST00000501597 ABCC9O60706 1549 aa15.17■□□□□ 0.02
RPL41-202ENST00000501597 FOXD1Q16676 465 aa14.66□□□□□ -0.06
RPL41-202ENST00000501597 ADRA2BP18089 450 aa14.61□□□□□ -0.07
RPL41-202ENST00000501597 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
RPL41-202ENST00000501597 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
RPL41-202ENST00000501597 NACADO15069 1562 aa14.51□□□□□ -0.09
RPL41-202ENST00000501597 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
RPL41-202ENST00000501597 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
RPL41-202ENST00000501597 MYO15BQ96JP2 1530 aa14.4□□□□□ -0.1
RPL41-202ENST00000501597 DCAF1Q9Y4B6 1507 aa14.28□□□□□ -0.12
RPL41-202ENST00000501597 KCNA4P22459 653 aa14.23□□□□□ -0.13
RPL41-202ENST00000501597 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.145e-9■□□□□ 10.3
RPL41-202ENST00000501597 UNC13AQ9UPW8 1703 aa14.12□□□□□ -0.15
RPL41-202ENST00000501597 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
RPL41-202ENST00000501597 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
RPL41-202ENST00000501597 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.17
RPL41-202ENST00000501597 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
RPL41-202ENST00000501597 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
RPL41-202ENST00000501597 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
RPL41-202ENST00000501597 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
RPL41-202ENST00000501597 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
RPL41-202ENST00000501597 EIF4G1Q04637 1599 aaKnown RBP13.74□□□□□ -0.21
RPL41-202ENST00000501597 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
RPL41-202ENST00000501597 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
RPL41-202ENST00000501597 CECR2Q9BXF3 1484 aa13.66□□□□□ -0.22
RPL41-202ENST00000501597 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
RPL41-202ENST00000501597 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
RPL41-202ENST00000501597 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
RPL41-202ENST00000501597 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
RPL41-202ENST00000501597 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
RPL41-202ENST00000501597 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
RPL41-202ENST00000501597 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
RPL41-202ENST00000501597 BAZ1AQ9NRL2 1556 aaPredicted RBP13.39□□□□□ -0.27
RPL41-202ENST00000501597 MSH5O43196 834 aa13.38□□□□□ -0.27
RPL41-202ENST00000501597 ATAD2BQ9ULI0 1458 aa13.37□□□□□ -0.27
RPL41-202ENST00000501597 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
RPL41-202ENST00000501597 RSF1Q96T23 1441 aaPredicted RBP13.35□□□□□ -0.27
RPL41-202ENST00000501597 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.28
RPL41-202ENST00000501597 HMGXB3Q12766 1538 aa13.31□□□□□ -0.28
RPL41-202ENST00000501597 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
RPL41-202ENST00000501597 BAZ1BQ9UIG0 1483 aaKnown RBP13.27□□□□□ -0.29
RPL41-202ENST00000501597 WIZO95785 1651 aa13.24□□□□□ -0.29
RPL41-202ENST00000501597 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
RPL41-202ENST00000501597 ZBTB22O15209 634 aa13.08□□□□□ -0.32
RPL41-202ENST00000501597 NESP48681 1621 aa13.07□□□□□ -0.32
RPL41-202ENST00000501597 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
RPL41-202ENST00000501597 LAMC3Q9Y6N6 1575 aa13.05□□□□□ -0.32
RPL41-202ENST00000501597 CUX2O14529 1486 aa13.03□□□□□ -0.32
RPL41-202ENST00000501597 RNF216Q9NWF9 866 aaPredicted RBP13.02□□□□□ -0.33
RPL41-202ENST00000501597 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
RPL41-202ENST00000501597 CADPSQ9ULU8 1353 aa13□□□□□ -0.33
RPL41-202ENST00000501597 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
RPL41-202ENST00000501597 PDS5BQ9NTI5 1447 aa12.99□□□□□ -0.33
RPL41-202ENST00000501597 CCDC88BA6NC98 1476 aa12.95□□□□□ -0.34
RPL41-202ENST00000501597 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
RPL41-202ENST00000501597 CFTRP13569 1480 aa12.89□□□□□ -0.35
RPL41-202ENST00000501597 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
RPL41-202ENST00000501597 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
RPL41-202ENST00000501597 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
RPL41-202ENST00000501597 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
RPL41-202ENST00000501597 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
RPL41-202ENST00000501597 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
RPL41-202ENST00000501597 WDR62O43379 1518 aa12.8□□□□□ -0.36
RPL41-202ENST00000501597 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.37
RPL41-202ENST00000501597 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
RPL41-202ENST00000501597 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
RPL41-202ENST00000501597 URB2Q14146 1524 aaKnown RBP12.71□□□□□ -0.38
RPL41-202ENST00000501597 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
RPL41-202ENST00000501597 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
RPL41-202ENST00000501597 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
RPL41-202ENST00000501597 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
RPL41-202ENST00000501597 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
RPL41-202ENST00000501597 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.47e-12■■■■■ 31.3
RPL41-202ENST00000501597 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
RPL41-202ENST00000501597 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
RPL41-202ENST00000501597 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
RPL41-202ENST00000501597 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
RPL41-202ENST00000501597 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
RPL41-202ENST00000501597 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
RPL41-202ENST00000501597 TOP2BQ02880 1626 aa12.47□□□□□ -0.41
RPL41-202ENST00000501597 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
RPL41-202ENST00000501597 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
RPL41-202ENST00000501597 CUX1P39880 1505 aa12.47□□□□□ -0.41
RPL41-202ENST00000501597 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
RPL41-202ENST00000501597 SOGA1O94964 1423 aa12.45□□□□□ -0.42
RPL41-202ENST00000501597 EIF4G3O43432 1585 aaKnown RBP12.45□□□□□ -0.42
RPL41-202ENST00000501597 FGD5Q6ZNL6 1462 aa12.45□□□□□ -0.42
RPL41-202ENST00000501597 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.428e-42■■■■■ 77.3
RPL41-202ENST00000501597 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
RPL41-202ENST00000501597 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
RPL41-202ENST00000501597 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
RPL41-202ENST00000501597 TDRD9Q8NDG6 1382 aaKnown RBP12.4□□□□□ -0.42
RPL41-202ENST00000501597 RUSC2Q8N2Y8 1516 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms