RNA–Protein interactions for RNA: ENST00000616859.4

ZCCHC17-207, Transcript of zinc finger CCHC-type containing 17, humanhuman

TSL 4 BASIC

Gene ZCCHC17, Length 1,458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17-207ENST00000616859 NISCHQ9Y2I1 1504 aa35.92■■■■□ 3.34
ZCCHC17-207ENST00000616859 CCDC180Q9P1Z9 1646 aa32.2■■■□□ 2.74
ZCCHC17-207ENST00000616859 ABCC9O60706 1549 aa32.05■■■□□ 2.72
ZCCHC17-207ENST00000616859 RB1CC1Q8TDY2 1594 aa30.57■■■□□ 2.48
ZCCHC17-207ENST00000616859 NACADO15069 1562 aa30.39■■■□□ 2.46
ZCCHC17-207ENST00000616859 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
ZCCHC17-207ENST00000616859 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.39
ZCCHC17-207ENST00000616859 DNAJC5BQ9UF47 199 aa29.92■■■□□ 2.38
ZCCHC17-207ENST00000616859 UNC13AQ9UPW8 1703 aa29.89■■■□□ 2.38
ZCCHC17-207ENST00000616859 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
ZCCHC17-207ENST00000616859 ZCCHC6Q5VYS8 1495 aaKnown RBP29.81■■■□□ 2.36
ZCCHC17-207ENST00000616859 BICRAQ9NZM4 1560 aa29.68■■■□□ 2.34
ZCCHC17-207ENST00000616859 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
ZCCHC17-207ENST00000616859 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
ZCCHC17-207ENST00000616859 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
ZCCHC17-207ENST00000616859 CC2D2AQ9P2K1 1620 aa28.97■■■□□ 2.23
ZCCHC17-207ENST00000616859 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
ZCCHC17-207ENST00000616859 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
ZCCHC17-207ENST00000616859 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
ZCCHC17-207ENST00000616859 SMARCA4P51532 1647 aa28■■■□□ 2.07
ZCCHC17-207ENST00000616859 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
ZCCHC17-207ENST00000616859 SMARCA2P51531 1590 aa27.92■■■□□ 2.06
ZCCHC17-207ENST00000616859 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
ZCCHC17-207ENST00000616859 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
ZCCHC17-207ENST00000616859 BAZ1BQ9UIG0 1483 aaKnown RBP27.73■■■□□ 2.03
ZCCHC17-207ENST00000616859 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
ZCCHC17-207ENST00000616859 MROH2BQ7Z745 1585 aa27.69■■■□□ 2.02
ZCCHC17-207ENST00000616859 ERCC6Q03468 1493 aa27.67■■■□□ 2.02
ZCCHC17-207ENST00000616859 NESP48681 1621 aa27.58■■■□□ 2.01
ZCCHC17-207ENST00000616859 CUX2O14529 1486 aa27.56■■■□□ 2
ZCCHC17-207ENST00000616859 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
ZCCHC17-207ENST00000616859 WIZO95785 1651 aa27.37■■□□□ 1.97
ZCCHC17-207ENST00000616859 DNAJC5Q9H3Z4 198 aa27.36■■□□□ 1.97
ZCCHC17-207ENST00000616859 THOC2Q8NI27 1593 aaKnown RBP27.28■■□□□ 1.96
ZCCHC17-207ENST00000616859 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
ZCCHC17-207ENST00000616859 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
ZCCHC17-207ENST00000616859 CADPSQ9ULU8 1353 aa27.19■■□□□ 1.94
ZCCHC17-207ENST00000616859 RSF1Q96T23 1441 aaPredicted RBP27.15■■□□□ 1.94
ZCCHC17-207ENST00000616859 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
ZCCHC17-207ENST00000616859 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
ZCCHC17-207ENST00000616859 WDR62O43379 1518 aa26.94■■□□□ 1.9
ZCCHC17-207ENST00000616859 CFTRP13569 1480 aa26.92■■□□□ 1.9
ZCCHC17-207ENST00000616859 CEP164Q9UPV0 1460 aa26.92■■□□□ 1.9
ZCCHC17-207ENST00000616859 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
ZCCHC17-207ENST00000616859 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
ZCCHC17-207ENST00000616859 PRDM2Q13029 1718 aa26.69■■□□□ 1.86
ZCCHC17-207ENST00000616859 URB2Q14146 1524 aaKnown RBP26.68■■□□□ 1.86
ZCCHC17-207ENST00000616859 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
ZCCHC17-207ENST00000616859 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
ZCCHC17-207ENST00000616859 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
ZCCHC17-207ENST00000616859 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.81
ZCCHC17-207ENST00000616859 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.81
ZCCHC17-207ENST00000616859 OSCARQ8IYS5 282 aa26.3■■□□□ 1.8
ZCCHC17-207ENST00000616859 TRIM41Q8WV44 630 aa26.23■■□□□ 1.79
ZCCHC17-207ENST00000616859 EIF4G3O43432 1585 aaKnown RBP26.21■■□□□ 1.79
ZCCHC17-207ENST00000616859 TARBP1Q13395 1621 aaKnown RBP26.17■■□□□ 1.78
ZCCHC17-207ENST00000616859 POLA1P09884 1462 aaPredicted RBP26.14■■□□□ 1.78
ZCCHC17-207ENST00000616859 AQRO60306 1485 aaKnown RBP eCLIP26.09■■□□□ 1.77
ZCCHC17-207ENST00000616859 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
ZCCHC17-207ENST00000616859 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
ZCCHC17-207ENST00000616859 SOGA1O94964 1423 aa26.02■■□□□ 1.76
ZCCHC17-207ENST00000616859 CUX1P39880 1505 aa26.02■■□□□ 1.76
ZCCHC17-207ENST00000616859 FGD5Q6ZNL6 1462 aa26.01■■□□□ 1.75
ZCCHC17-207ENST00000616859 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
ZCCHC17-207ENST00000616859 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
ZCCHC17-207ENST00000616859 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
ZCCHC17-207ENST00000616859 CHD1O14646 1710 aa25.98■■□□□ 1.75
ZCCHC17-207ENST00000616859 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.75
ZCCHC17-207ENST00000616859 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
ZCCHC17-207ENST00000616859 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
ZCCHC17-207ENST00000616859 FBLN2P98095 1184 aa25.88■■□□□ 1.73
ZCCHC17-207ENST00000616859 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
ZCCHC17-207ENST00000616859 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
ZCCHC17-207ENST00000616859 MAGI1Q96QZ7 1491 aaPredicted RBP25.78■■□□□ 1.72
ZCCHC17-207ENST00000616859 PBRM1Q86U86 1689 aa25.72■■□□□ 1.71
ZCCHC17-207ENST00000616859 ABCA10Q8WWZ4 1543 aa25.71■■□□□ 1.71
ZCCHC17-207ENST00000616859 GAPVD1Q14C86 1478 aa25.71■■□□□ 1.71
ZCCHC17-207ENST00000616859 CHMP7Q8WUX9 453 aaPredicted RBP25.71■■□□□ 1.71
ZCCHC17-207ENST00000616859 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
ZCCHC17-207ENST00000616859 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
ZCCHC17-207ENST00000616859 ABCA5Q8WWZ7 1642 aa25.68■■□□□ 1.7
ZCCHC17-207ENST00000616859 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
ZCCHC17-207ENST00000616859 SYNJ1O43426 1573 aa25.67■■□□□ 1.7
ZCCHC17-207ENST00000616859 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
ZCCHC17-207ENST00000616859 BIVM-ERCC5R4GMW8 1640 aa25.64■■□□□ 1.69
ZCCHC17-207ENST00000616859 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
ZCCHC17-207ENST00000616859 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
ZCCHC17-207ENST00000616859 ADAMTS12P58397 1594 aa25.49■■□□□ 1.67
ZCCHC17-207ENST00000616859 GRIN2AQ12879 1464 aa25.46■■□□□ 1.67
ZCCHC17-207ENST00000616859 ERICH3Q5RHP9 1530 aa25.4■■□□□ 1.66
ZCCHC17-207ENST00000616859 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
ZCCHC17-207ENST00000616859 CEP170Q5SW79 1584 aa25.38■■□□□ 1.65
ZCCHC17-207ENST00000616859 NUP160Q12769 1436 aa25.37■■□□□ 1.65
ZCCHC17-207ENST00000616859 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
ZCCHC17-207ENST00000616859 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
ZCCHC17-207ENST00000616859 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
ZCCHC17-207ENST00000616859 RUSC2Q8N2Y8 1516 aa25.13■■□□□ 1.61
ZCCHC17-207ENST00000616859 KIF27Q86VH2 1401 aa25.12■■□□□ 1.61
ZCCHC17-207ENST00000616859 PRG4Q92954 1404 aaPredicted RBP25.11■■□□□ 1.61
ZCCHC17-207ENST00000616859 IGF1RP08069 1367 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms