Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MFAP1P1-201ENST00000442257 1255 ntBASIC16.53■□□□□ 0.24
CDH20Q9HBT6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 MIR1238-201ENST00000408483 83 ntBASIC16.52■□□□□ 0.24
CDH20Q9HBT6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 CKBP1-201ENST00000565489 1086 ntBASIC16.52■□□□□ 0.24
CDH20Q9HBT6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH20Q9HBT6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.52■□□□□ 0.23
CDH20Q9HBT6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH20Q9HBT6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 AC079598.2-202ENST00000546624 1451 ntBASIC16.51■□□□□ 0.23
CDH20Q9HBT6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.51■□□□□ 0.23
CDH20Q9HBT6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH20Q9HBT6 AC096733.2-201ENST00000609937 1394 ntBASIC16.51■□□□□ 0.23
CDH20Q9HBT6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 AP005242.2-201ENST00000580065 1175 ntBASIC16.5■□□□□ 0.23
CDH20Q9HBT6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms