RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 NISCHQ9Y2I1 1504 aa47.81■■■■■ 5.24
PDCD5-207ENST00000590247 CCDC180Q9P1Z9 1646 aa42.83■■■■■ 4.45
PDCD5-207ENST00000590247 ABCC9O60706 1549 aa42.53■■■■■ 4.4
PDCD5-207ENST00000590247 RB1CC1Q8TDY2 1594 aa40.61■■■■■ 4.09
PDCD5-207ENST00000590247 NACADO15069 1562 aa40.41■■■■■ 4.06
PDCD5-207ENST00000590247 DCAF8L2P0C7V8 631 aa40.14■■■■■ 4.02
PDCD5-207ENST00000590247 MYO15BQ96JP2 1530 aa39.96■■■■□ 3.99
PDCD5-207ENST00000590247 UNC13AQ9UPW8 1703 aa39.79■■■■□ 3.96
PDCD5-207ENST00000590247 DNAJC5BQ9UF47 199 aa39.73■■■■□ 3.95
PDCD5-207ENST00000590247 ZCCHC6Q5VYS8 1495 aaKnown RBP39.68■■■■□ 3.94
PDCD5-207ENST00000590247 PABPN1Q86U42 306 aaKnown RBP eCLIP39.62■■■■□ 3.93
PDCD5-207ENST00000590247 DCAF1Q9Y4B6 1507 aa39.54■■■■□ 3.92
PDCD5-207ENST00000590247 BICRAQ9NZM4 1560 aa39.48■■■■□ 3.91
PDCD5-207ENST00000590247 SCRIBQ14160 1630 aa39■■■■□ 3.83
PDCD5-207ENST00000590247 SHROOM4Q9ULL8 1493 aa38.93■■■■□ 3.82
PDCD5-207ENST00000590247 CC2D2AQ9P2K1 1620 aa38.48■■■■□ 3.75
PDCD5-207ENST00000590247 EIF4G1Q04637 1599 aaKnown RBP38.45■■■■□ 3.75
PDCD5-207ENST00000590247 CECR2Q9BXF3 1484 aa38.29■■■■□ 3.72
PDCD5-207ENST00000590247 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
PDCD5-207ENST00000590247 SMARCA4P51532 1647 aa37.26■■■■□ 3.56
PDCD5-207ENST00000590247 ATAD2BQ9ULI0 1458 aa37.22■■■■□ 3.55
PDCD5-207ENST00000590247 SMARCA2P51531 1590 aa37.12■■■■□ 3.53
PDCD5-207ENST00000590247 BAZ1AQ9NRL2 1556 aaPredicted RBP37.08■■■■□ 3.53
PDCD5-207ENST00000590247 HMGXB3Q12766 1538 aa37.05■■■■□ 3.52
PDCD5-207ENST00000590247 PEG3Q9GZU2 1588 aa36.92■■■■□ 3.5
PDCD5-207ENST00000590247 MROH2BQ7Z745 1585 aa36.85■■■■□ 3.49
PDCD5-207ENST00000590247 BAZ1BQ9UIG0 1483 aaKnown RBP36.84■■■■□ 3.49
PDCD5-207ENST00000590247 ERCC6Q03468 1493 aa36.67■■■■□ 3.46
PDCD5-207ENST00000590247 NESP48681 1621 aa36.63■■■■□ 3.45
PDCD5-207ENST00000590247 CUX2O14529 1486 aa36.57■■■■□ 3.45
PDCD5-207ENST00000590247 WIZO95785 1651 aa36.43■■■■□ 3.42
PDCD5-207ENST00000590247 LAMC3Q9Y6N6 1575 aa36.42■■■■□ 3.42
PDCD5-207ENST00000590247 DNAJC5Q9H3Z4 198 aa36.28■■■■□ 3.4
PDCD5-207ENST00000590247 THOC2Q8NI27 1593 aaKnown RBP36.24■■■■□ 3.39
PDCD5-207ENST00000590247 KIF21AQ7Z4S6 1674 aa36.21■■■■□ 3.39
PDCD5-207ENST00000590247 RSF1Q96T23 1441 aaPredicted RBP36.17■■■■□ 3.38
PDCD5-207ENST00000590247 PDS5BQ9NTI5 1447 aa36.17■■■■□ 3.38
PDCD5-207ENST00000590247 CADPSQ9ULU8 1353 aa36.16■■■■□ 3.38
PDCD5-207ENST00000590247 TOP2AP11388 1531 aaKnown RBP35.97■■■■□ 3.35
PDCD5-207ENST00000590247 MRC2Q9UBG0 1479 aa35.86■■■■□ 3.33
PDCD5-207ENST00000590247 CFTRP13569 1480 aa35.82■■■■□ 3.32
PDCD5-207ENST00000590247 WDR62O43379 1518 aa35.79■■■■□ 3.32
PDCD5-207ENST00000590247 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
PDCD5-207ENST00000590247 FANCD2Q9BXW9 1451 aa35.74■■■■□ 3.31
PDCD5-207ENST00000590247 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
PDCD5-207ENST00000590247 PRDM2Q13029 1718 aa35.54■■■■□ 3.28
PDCD5-207ENST00000590247 URB2Q14146 1524 aaKnown RBP35.47■■■■□ 3.27
PDCD5-207ENST00000590247 TOPBP1Q92547 1522 aa35.11■■■■□ 3.21
PDCD5-207ENST00000590247 IFT140Q96RY7 1462 aa35.04■■■■□ 3.2
PDCD5-207ENST00000590247 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
PDCD5-207ENST00000590247 DNMBPQ6XZF7 1577 aa35■■■■□ 3.19
PDCD5-207ENST00000590247 ZNF608Q9ULD9 1512 aaPredicted RBP34.97■■■■□ 3.19
PDCD5-207ENST00000590247 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
PDCD5-207ENST00000590247 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
PDCD5-207ENST00000590247 EIF4G3O43432 1585 aaKnown RBP34.8■■■■□ 3.16
PDCD5-207ENST00000590247 POLA1P09884 1462 aaPredicted RBP34.78■■■■□ 3.16
PDCD5-207ENST00000590247 TRIM41Q8WV44 630 aa34.72■■■■□ 3.15
PDCD5-207ENST00000590247 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.142e-9■■■■■ 26.8
PDCD5-207ENST00000590247 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
PDCD5-207ENST00000590247 RAD54L2Q9Y4B4 1467 aa34.63■■■■□ 3.13
PDCD5-207ENST00000590247 CUX1P39880 1505 aa34.6■■■■□ 3.13
PDCD5-207ENST00000590247 SOGA1O94964 1423 aa34.59■■■■□ 3.13
PDCD5-207ENST00000590247 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
PDCD5-207ENST00000590247 CHD1O14646 1710 aa34.52■■■■□ 3.12
PDCD5-207ENST00000590247 RIMBP3CA6NJZ7 1639 aa34.49■■■■□ 3.11
PDCD5-207ENST00000590247 RIMBP3BA6NNM3 1639 aa34.49■■■■□ 3.11
PDCD5-207ENST00000590247 RIMBP3Q9UFD9 1639 aa34.49■■■■□ 3.11
PDCD5-207ENST00000590247 TDRD9Q8NDG6 1382 aaKnown RBP34.49■■■■□ 3.11
PDCD5-207ENST00000590247 WDR97A6NE52 1622 aa34.47■■■■□ 3.11
PDCD5-207ENST00000590247 ARHGEF11O15085 1522 aa34.39■■■■□ 3.1
PDCD5-207ENST00000590247 FBLN2P98095 1184 aa34.33■■■■□ 3.09
PDCD5-207ENST00000590247 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
PDCD5-207ENST00000590247 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
PDCD5-207ENST00000590247 MAGI1Q96QZ7 1491 aaPredicted RBP34.26■■■■□ 3.07
PDCD5-207ENST00000590247 ABCA10Q8WWZ4 1543 aa34.21■■■■□ 3.07
PDCD5-207ENST00000590247 PBRM1Q86U86 1689 aa34.2■■■■□ 3.07
PDCD5-207ENST00000590247 GAPVD1Q14C86 1478 aa34.18■■■■□ 3.06
PDCD5-207ENST00000590247 ABCA5Q8WWZ7 1642 aa34.16■■■■□ 3.06
PDCD5-207ENST00000590247 CHMP7Q8WUX9 453 aaPredicted RBP34.14■■■■□ 3.06
PDCD5-207ENST00000590247 BIVM-ERCC5R4GMW8 1640 aa34.14■■■■□ 3.06
PDCD5-207ENST00000590247 SYNJ2O15056 1496 aa34.14■■■■□ 3.06
PDCD5-207ENST00000590247 CLASP1Q7Z460 1538 aa34.13■■■■□ 3.05
PDCD5-207ENST00000590247 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
PDCD5-207ENST00000590247 WRNQ14191 1432 aaPredicted RBP eCLIP34.09■■■■□ 3.05
PDCD5-207ENST00000590247 SYNJ1O43426 1573 aa34.09■■■■□ 3.05
PDCD5-207ENST00000590247 ARAP1Q96P48 1450 aa34.07■■■■□ 3.05
PDCD5-207ENST00000590247 CYB5RLQ6IPT4 315 aa34.07■■■■□ 3.04
PDCD5-207ENST00000590247 ADAMTS12P58397 1594 aa33.87■■■■□ 3.01
PDCD5-207ENST00000590247 GRIN2AQ12879 1464 aa33.83■■■■□ 3.01
PDCD5-207ENST00000590247 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
PDCD5-207ENST00000590247 FHAD1B1AJZ9 1412 aa33.76■■■□□ 2.99
PDCD5-207ENST00000590247 CEP170Q5SW79 1584 aa33.73■■■□□ 2.99
PDCD5-207ENST00000590247 NUP160Q12769 1436 aa33.73■■■□□ 2.99
PDCD5-207ENST00000590247 ERCC6L2Q5T890 1561 aa33.61■■■□□ 2.97
PDCD5-207ENST00000590247 SHROOM2Q13796 1616 aa33.59■■■□□ 2.97
PDCD5-207ENST00000590247 TRHP20396 242 aaPredicted RBP33.57■■■□□ 2.96
PDCD5-207ENST00000590247 KIF27Q86VH2 1401 aa33.41■■■□□ 2.94
PDCD5-207ENST00000590247 IGF1RP08069 1367 aa33.4■■■□□ 2.94
PDCD5-207ENST00000590247 RUSC2Q8N2Y8 1516 aa33.39■■■□□ 2.94
PDCD5-207ENST00000590247 PRG4Q92954 1404 aaPredicted RBP33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms